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 | Acesso ao texto completo restrito à biblioteca da Embrapa Mandioca e Fruticultura. Para informações adicionais entre em contato com cnpmf.biblioteca@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Mandioca e Fruticultura. |
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Data corrente: |
09/02/2009 |
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Data da última atualização: |
06/07/2023 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
OLIVEIRA, E. J.; VIEIRA, M. L. C.; GARCIA, A. A. F.; MUNHOZ, C. F.; MARGARIDO, G. R. A.; CONSOLI, L.; MATTA, F. P.; MORAES, M. C.; ZUCCHI, M. I.; FUNGARO, M. H. P. |
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Afiliação: |
Eder Jorge de Oliveira, CNPMF; Maria Lucia C. Vieira, ESALQ/USP; Antônio Augusto F. Garcia, ESALQ/USP; Carla F. Munhoz, ESALQ/USP; Gabriel R. A. Margarido, ESALQ/USP; Luciano Consoli, ESALQ/USP; Frederico P. Matta, ESALQ/USP; Michel C. Moraes, ESALQ/USP; Maria I. Zucchi, IAC; Maria Helena P. Fungaro, UEL. |
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Título: |
An integrated molecular map yellow passion fruit based on simultaneous maximum-likelihood estimation of linkage and linkage phases. |
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Ano de publicação: |
2008 |
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Fonte/Imprenta: |
Journal of the American Society Horticultural Science, Mount Vernon, v. 133, n. 1, p. 35-41, jan. 2008. |
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Descrição Física: |
il. |
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ISSN: |
0003-1062 |
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Idioma: |
Inglês |
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Conteúdo: |
The development of genetic maps for auto-incompatible species, such as the yellow passion fruit (Passiflora edulis Sims f. flavicarpa Deg.) is restricted due to the unfeasibility of obtaining traditional mapping populations based on inbred lines. For this reason, yellow passion fruit linkage maps were generally constructed using a strategy known as two-way pseudo-testcross, based on monoparental dominant markers segregating in a 1:1 fashion. Due to the lack of information from these markers in one of the parents, two individual (parental) maps were obtained. However, integration of these maps is essential, and biparental markers can be used for such an operation. The objective of our study was to construct an integrated molecular map for a full-sib population of yellow passion fruit combining different loci configuration generated from amplified fragment length polymorphisms (AFLPs) and microsatellite markers and using a novel approach based on simultaneous maximum-likelihood estimation of linkage and linkage phases, specially designed for outcrossing species. Of the total number of loci, 76%, 21%, 0.7%, and 2.3% did segregate in 1:1, 3:1, 1:2:1, and 1:1:1:1 ratios, respectively. Ten linkage groups (LGs) were established with a logarithm of the odds (LOD) score 5.0 assuming a recombination fraction 0.35. On average, 24 markers were assigned per LG, representing a total map length of 1687 cM, with a marker density of 6.9 cM. No markers were placed as accessories on the map as was done with previously constructed individual maps. MenosThe development of genetic maps for auto-incompatible species, such as the yellow passion fruit (Passiflora edulis Sims f. flavicarpa Deg.) is restricted due to the unfeasibility of obtaining traditional mapping populations based on inbred lines. For this reason, yellow passion fruit linkage maps were generally constructed using a strategy known as two-way pseudo-testcross, based on monoparental dominant markers segregating in a 1:1 fashion. Due to the lack of information from these markers in one of the parents, two individual (parental) maps were obtained. However, integration of these maps is essential, and biparental markers can be used for such an operation. The objective of our study was to construct an integrated molecular map for a full-sib population of yellow passion fruit combining different loci configuration generated from amplified fragment length polymorphisms (AFLPs) and microsatellite markers and using a novel approach based on simultaneous maximum-likelihood estimation of linkage and linkage phases, specially designed for outcrossing species. Of the total number of loci, 76%, 21%, 0.7%, and 2.3% did segregate in 1:1, 3:1, 1:2:1, and 1:1:1:1 ratios, respectively. Ten linkage groups (LGs) were established with a logarithm of the odds (LOD) score 5.0 assuming a recombination fraction 0.35. On average, 24 markers were assigned per LG, representing a total map length of 1687 cM, with a marker density of 6.9 cM. No markers were placed as accessories on the map as... Mostrar Tudo |
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Palavras-Chave: |
AFLP; flavicarpa; Linkage map integration; Microsatellite; Multipoint distance; Outcrossing specie; Passiflora edulis f. |
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Thesagro: |
Maracujá; Marcador Molecular. |
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Categoria do assunto: |
-- |
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Marc: |
LEADER 02652naa a2200361 a 4500
001 1655525
005 2023-07-06
008 2008 bl uuuu u00u1 u #d
022 $a0003-1062
100 1 $aOLIVEIRA, E. J.
245 $aAn integrated molecular map yellow passion fruit based on simultaneous maximum-likelihood estimation of linkage and linkage phases.$h[electronic resource]
260 $c2008
300 $cil.
520 $aThe development of genetic maps for auto-incompatible species, such as the yellow passion fruit (Passiflora edulis Sims f. flavicarpa Deg.) is restricted due to the unfeasibility of obtaining traditional mapping populations based on inbred lines. For this reason, yellow passion fruit linkage maps were generally constructed using a strategy known as two-way pseudo-testcross, based on monoparental dominant markers segregating in a 1:1 fashion. Due to the lack of information from these markers in one of the parents, two individual (parental) maps were obtained. However, integration of these maps is essential, and biparental markers can be used for such an operation. The objective of our study was to construct an integrated molecular map for a full-sib population of yellow passion fruit combining different loci configuration generated from amplified fragment length polymorphisms (AFLPs) and microsatellite markers and using a novel approach based on simultaneous maximum-likelihood estimation of linkage and linkage phases, specially designed for outcrossing species. Of the total number of loci, 76%, 21%, 0.7%, and 2.3% did segregate in 1:1, 3:1, 1:2:1, and 1:1:1:1 ratios, respectively. Ten linkage groups (LGs) were established with a logarithm of the odds (LOD) score 5.0 assuming a recombination fraction 0.35. On average, 24 markers were assigned per LG, representing a total map length of 1687 cM, with a marker density of 6.9 cM. No markers were placed as accessories on the map as was done with previously constructed individual maps.
650 $aMaracujá
650 $aMarcador Molecular
653 $aAFLP
653 $aflavicarpa
653 $aLinkage map integration
653 $aMicrosatellite
653 $aMultipoint distance
653 $aOutcrossing specie
653 $aPassiflora edulis f
700 1 $aVIEIRA, M. L. C.
700 1 $aGARCIA, A. A. F.
700 1 $aMUNHOZ, C. F.
700 1 $aMARGARIDO, G. R. A.
700 1 $aCONSOLI, L.
700 1 $aMATTA, F. P.
700 1 $aMORAES, M. C.
700 1 $aZUCCHI, M. I.
700 1 $aFUNGARO, M. H. P.
773 $tJournal of the American Society Horticultural Science, Mount Vernon$gv. 133, n. 1, p. 35-41, jan. 2008.
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Embrapa Mandioca e Fruticultura (CNPMF) |
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| Registros recuperados : 4 | |
| 2. |  | CARNEIRO, O. dos S.; ALMEIDA, O. de; SOUZA FILHO, A. P. S.; POLTRONIERI, L. S.; ARRUDA, A. C.; GUILHON, G. M. S. P.; SILVA, M. N. da; ARRUDA, M. S. P. Estudo químico e microbiológico do caule de Uncaria tomentosa. In: REUNIÃO ANUAL SOCIEDADE BRASILEIRA DE QUÍMICA, 33., 2010, Águas de Lindóia. A química construindo um futuro melhor. [São Paulo]: SBQ, 2010.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 3. | | CARNEIRO, O. dos S.; ALMEIDA, O. de; SOUZA FILHO, A. P. S.; POLTRONIERI, L. S.; SANTOS, L. da S.; GUILHON, G. M. S. P.; SILVA, M. N. da; ARRUDA, M. S. P.; ARRUDA, A. C. Estudo alelopático e antifúngico de extratos vegetais de quatro espécies amazônicas. In: REUNIÃO ANUAL DA SOCIEDADE BRASILEIRA DE QUÍMICA, 32., 2009, Fortaleza. Químicos para uma potência emergente: resumos. São Paulo: Sociedade Brasileira de Química, 2009.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 4. | | PENHA, D. de S.; RODRIGUES, S. M. S.; BITENCOURT, H. R.; SOUZA FILHO, A. P. da S.; ROMERO, O. A. S.; MACIEL, C. J. de A.; MARINHO, P. S. B.; FEITOSA, A. de O.; MARINHO, A. M. do R.; ALMEIDA, O. de. Síntese de (1E,4E)-1,5-bis-(2-metóxi-fenil)-penta-1,4-dien-3-ona a partir de (2E)-1-(2-metóxi-fenil)-but-2-en-1-ona. In: CONGRESSO BRASILEIRO DE QUÍMICA, 59., 2019, João Pessoa. Trabalhos aceitos. Rio de Janeiro: ABQ, 2019.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| Registros recuperados : 4 | |
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