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 | Acesso ao texto completo restrito à biblioteca da Embrapa Florestas. Para informações adicionais entre em contato com cnpf.biblioteca@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Florestas. |
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Data corrente: |
13/04/2018 |
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Data da última atualização: |
07/05/2018 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
TAHERI, S.; AMES, S.; ROY, V.; DECAËNS, T.; WILLIAMS, B. W.; ANDERSON, F.; ROUGERIE, R.; CHANG, C.-H.; BROWN, G. G.; CUNHA, L.; STANTON, D. W. G.; SILVA, E. da; CHEN, J-H.; LEMMON, A. R.; LEMMON, E. M.; BARTZ, M.; BARETTA, D.; BAROIS, I.; LAPIED, E.; COULIS, M.; DUPONT, L. |
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Afiliação: |
S. TAHERI, Université Paris Est Créteil; S. JAMES, University of Iowa; V. ROY, Université Paris Est Créteil; T. DECAËNS, Université de Montpellier; B. W. WILLIAMS, Southern Illinois University; F. ANDERSON, Southern Illinois University; R. ROUGERIE, Muséum national d'Histoire Naturelle; C.-H. CHANG, Johns Hopkins University; GEORGE GARDNER BROWN, CNPF; L. CUNHA, Cardiff University; D. W. G. STANTON, Cardiff University; ELODIE DA SILVA, Bolsista da Embrapa Florestas; J-H. CHEN, National Taiwan University; A. R. LEMMON, Florida State University; E. MORIARTY LEMMON, Florida State University; MARIE LOUISE BARTZ, Universidade Positivo; D. BARETTA, Universidade do Estado de Santa Catarina; I. BAROIS, Red de Ecología Funcional; E. LAPIED, Norwegian University of Life Sciences; M. COULIS, CIRAD; L. DUPONT, Université Paris Est Créteil. |
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Título: |
Complex taxonomy of the "brush tail" peregrine earthworm Pontoscolex corethrurus. |
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Ano de publicação: |
2018 |
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Fonte/Imprenta: |
Molecular Phylogenetics and Evolution, v. 124, p. 60-70, July 2018. |
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DOI: |
10.1016/j.ympev.2018.02.021 |
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Idioma: |
Inglês |
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Conteúdo: |
Pontoscolex corethrurus is the most widespread earthworm species in tropical and sub-tropical zones and one of the most studied in soil science. Although, ecological interactions of P. corethrurus with its environment are well documented, the taxonomic status of the species remains unclear. In this study, we investigated phylogenetic relationships within the genus Pontoscolex, in particular focusing on morphologically indistinguishable (i.e., cryptic) lineages. A total of 792 specimens collected from 25 different countries and islands all over the world were analyzed using two mitochondrial (COI and 16S rDNA) and two nuclear (internal transcribed spacers 2 and 28S rDNA) markers, and a total of 11 morphological characters both internal and external were investigated in all genetically characterized lineages. A large-scale multilocus sequence data matrix was also obtained for Pontoscolex spp. specimens using the Anchored Hybrid Enrichment (AHE) method. Multilocus phylogenetic and phylogenomic analyses, combined with species delimitation methods; including single locus (mPTP, ABGD) and multilocus (BPP) approaches, revealed congruent results. Four cryptic species were supported within the P. corethrurus species complex, and four potentially new species within the genus Pontoscolex. One widespread lineage (L1), within P. corethrurus complex was observed in the current population of Fritz Müller?s garden where P. corethrurus was first described in 1856. Cryptic lineages were observed in sympatry at several localities. This, in combination with observed heteroplasmy in COI gene in one population raises an important question of reproductive isolation between these species. MenosPontoscolex corethrurus is the most widespread earthworm species in tropical and sub-tropical zones and one of the most studied in soil science. Although, ecological interactions of P. corethrurus with its environment are well documented, the taxonomic status of the species remains unclear. In this study, we investigated phylogenetic relationships within the genus Pontoscolex, in particular focusing on morphologically indistinguishable (i.e., cryptic) lineages. A total of 792 specimens collected from 25 different countries and islands all over the world were analyzed using two mitochondrial (COI and 16S rDNA) and two nuclear (internal transcribed spacers 2 and 28S rDNA) markers, and a total of 11 morphological characters both internal and external were investigated in all genetically characterized lineages. A large-scale multilocus sequence data matrix was also obtained for Pontoscolex spp. specimens using the Anchored Hybrid Enrichment (AHE) method. Multilocus phylogenetic and phylogenomic analyses, combined with species delimitation methods; including single locus (mPTP, ABGD) and multilocus (BPP) approaches, revealed congruent results. Four cryptic species were supported within the P. corethrurus species complex, and four potentially new species within the genus Pontoscolex. One widespread lineage (L1), within P. corethrurus complex was observed in the current population of Fritz Müller?s garden where P. corethrurus was first described in 1856. Cryptic lineages were obser... Mostrar Tudo |
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Palavras-Chave: |
Brush tail; Nova espécie. |
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Thesagro: |
Minhoca; Taxonomia. |
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Thesaurus Nal: |
Earthworms; New species; Pontoscolex corethrurus. |
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Categoria do assunto: |
S Ciências Biológicas |
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Marc: |
LEADER 02901naa a2200457 a 4500
001 2090562
005 2018-05-07
008 2018 bl uuuu u00u1 u #d
024 7 $a10.1016/j.ympev.2018.02.021$2DOI
100 1 $aTAHERI, S.
245 $aComplex taxonomy of the "brush tail" peregrine earthworm Pontoscolex corethrurus.$h[electronic resource]
260 $c2018
520 $aPontoscolex corethrurus is the most widespread earthworm species in tropical and sub-tropical zones and one of the most studied in soil science. Although, ecological interactions of P. corethrurus with its environment are well documented, the taxonomic status of the species remains unclear. In this study, we investigated phylogenetic relationships within the genus Pontoscolex, in particular focusing on morphologically indistinguishable (i.e., cryptic) lineages. A total of 792 specimens collected from 25 different countries and islands all over the world were analyzed using two mitochondrial (COI and 16S rDNA) and two nuclear (internal transcribed spacers 2 and 28S rDNA) markers, and a total of 11 morphological characters both internal and external were investigated in all genetically characterized lineages. A large-scale multilocus sequence data matrix was also obtained for Pontoscolex spp. specimens using the Anchored Hybrid Enrichment (AHE) method. Multilocus phylogenetic and phylogenomic analyses, combined with species delimitation methods; including single locus (mPTP, ABGD) and multilocus (BPP) approaches, revealed congruent results. Four cryptic species were supported within the P. corethrurus species complex, and four potentially new species within the genus Pontoscolex. One widespread lineage (L1), within P. corethrurus complex was observed in the current population of Fritz Müller?s garden where P. corethrurus was first described in 1856. Cryptic lineages were observed in sympatry at several localities. This, in combination with observed heteroplasmy in COI gene in one population raises an important question of reproductive isolation between these species.
650 $aEarthworms
650 $aNew species
650 $aPontoscolex corethrurus
650 $aMinhoca
650 $aTaxonomia
653 $aBrush tail
653 $aNova espécie
700 1 $aAMES, S.
700 1 $aROY, V.
700 1 $aDECAËNS, T.
700 1 $aWILLIAMS, B. W.
700 1 $aANDERSON, F.
700 1 $aROUGERIE, R.
700 1 $aCHANG, C.-H.
700 1 $aBROWN, G. G.
700 1 $aCUNHA, L.
700 1 $aSTANTON, D. W. G.
700 1 $aSILVA, E. da
700 1 $aCHEN, J-H.
700 1 $aLEMMON, A. R.
700 1 $aLEMMON, E. M.
700 1 $aBARTZ, M.
700 1 $aBARETTA, D.
700 1 $aBAROIS, I.
700 1 $aLAPIED, E.
700 1 $aCOULIS, M.
700 1 $aDUPONT, L.
773 $tMolecular Phylogenetics and Evolution$gv. 124, p. 60-70, July 2018.
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Registro original: |
Embrapa Florestas (CNPF) |
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| Registros recuperados : 19 | |
| 1. |  | PAPPAS, M.; PEREIRA, W.; INGLIS, P. W.; PADILHA, J.; KILIAN, A.; STAPE, J.; PAPPAS, G.; GRATTAPAGLIA, D. Differential patterns of genome-wide methylation within and between Eucalyptus clones across variable environments. In: PLANT AND ANIMAL GENOME CONFERENCE, 25., 2017, San Diego. [Abstracts...]. San Diego, CA: [s.n.], 2017. W339.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 2. | | STEANE, D. A.; MYBURG, A. A.; KILIAN, A.; CARLING, J.; HUTTNER, E.; SANSALONI, C. P.; PETROLI, C. D.; GRATTAPAGLIA, D.; NICOLLE, D.; VAILLANCOURT, R. E. Dart markers herald a new era of eucalyptus phylogenomics. In: INTERNATIONAL PLANT & ANIMAL GENOMES CONFERENCE, 17., 2009, San Diego, CA. [Proceedings...]. [S. l.: s.n.], 2009. W192| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 3. | | SOBIERAJSKI, G. da R.; SOUSA, A. C. B. de; CANCADO, L. J.; SILVA, R. R.; PEREIRA, G.; SOUZA, A. P. de; KILIAN, A.; GARCIA, A. A. F. Caracterização do banco de germoplasma e macadâmia (Macadamia integrifolia - PROTEACEAE) a partir de marcadores SSR E DArT In: CONGRESSO BRASILEIRO DE RECURSOS GENÉTICOS, 2., 2012, Belém, PA. Anais... [S.l.]: Sociedade Brasileira de Recursos Genéticos. 4 p. 1 CD ROM| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Gado de Corte. |
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| 4. | | GRATTAPAGLIA, D.; RESENDE, M. D. V. de; RESENDE, M. R.; SANSALONI, C. P.; PETROLI, C. D.; MISSIAGGIA, A. A.; TAKAHASHI, E. K.; ZAMPROGNO, K. C.; KILIAN, A. Genomic selection for growth traits in Eucalyptus: accuracy within and across breeding populations. In: IUFRO TREE BIOTECHNOLOGY CONFERENCE, 2011, Arraial d'Ajuda. From genomes do integration and delivery: extended abstracts proceedings. [S.l.]: Embrapa: Veracel: IUFRO, 2011.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Florestas; Embrapa Recursos Genéticos e Biotecnologia. |
|  |
| 5. | | GRATTAPAGLIA, D.; SANSALONI, C.; PETROLI, C.; RESENDE JÚNIOR, M. F.; FARIA, D.; MISSIAGGIA, A. A.; TAKAHASHI. E. K.; ZAMPROGNO, K.; KILIAN, A.; RESENDE, M. D. V. de. Realized accuracies of Genomic Selection for volume growth in tropical Eucalyptus: marker assisted selection coming to reality in forest trees. In: CONGRESSO BRASILEIRO DE GENÉTICA, 56., 2010, Guarujá. Resumos... [Curitiba]: UFPR, 2010. p. 192.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Florestas. |
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| 6. | | STEANE, D. A.; NICOLLE, D.; SANSALONI, C. P.; PETROLI, C. D.; CARLING, J.; KILIAN, A.; MYBURG, A. A.; GRATTAPAGLIA, D.; VAILLANCOURT, R. E. Population genetic analysis and phylogeny reconstruction in Eucalyptus (Myrtaceae) using high-throughput, genome-wide genotyping. Molecular Phylogenetics and Evolution, v. 59, p. 206-224, 2011.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 7. | | SANSALONI, C. P.; PETROLI, C. D.; STEANE, D. A.; VAILLANCOURT, R. E.; CARLING, J.; MYBURG, A. A.; RESENDE, M. D. V. de; WENZL, P.; KILIAN, A.; GRATTAPAGLIA, D. High-Density diversity arrays technology (DArT) genotyping for cost-effective mapping and genome-wide selection in Eucalyptus. In: INTERNATIONAL PLANT & ANIMAL GENOMES CONFERENCE, 17., 2009, San Diego, CA. [Proceedings...]. [S. l.: s.n.], 2009. Resumo.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Florestas; Embrapa Recursos Genéticos e Biotecnologia. |
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| 8. | | SANSALONI, C. P.; PETROLI, C. D.; CARLING, J.; HUDSON, C.; STEANE, D. A.; MYBURG, A. M.; GRATTAPAGLIA, D.; VAILLANCOURT, R. E.; KILIAN, A. A high-density Diversity Arrays Technology (DArT) microarray for genome-wide genotyping in Eucalyptus. Plant Methods,v.6, n.16, 2010.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 9. | | GRATTAPAGLIA, D.; RESENDE, M. D. V. de; RESENDE, M. F. R.; SANSALONI, C. P.; PETROLI, C. D.; MISSIAGGIA, A. A.; TAKAHASHI, E. K.; ZAMPROGNO, K. C.; KILIAN, A. High realized accuracies of genomic selection for volume growth and wood density in Eucalyptus breeding populations with contrasting effective sizes. In: PLANT & ANIMAL GENOMES CONFERENCE, 19., 2011, San Diego. Conference... [S.l.]: International Plant & Animal Genome, 2011. Abstract. W235: Forest Trees.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Florestas; Embrapa Recursos Genéticos e Biotecnologia. |
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| 10. | | HUDSON, C. J.; KULLAN, A. R. K.; FREEMAN, J. C.; FARIA, D. A.; GRATTAPAGLIA, D.; KILIAN, A.; MYBURG, A. A.; POTTS, B. M.; VAILLANCOURT, R. E. High synteny and colinearity among Eucalyptus genomes revealed by high-density comparative genetic mapping. Tree Genetics & Genomes, v. 8, p. 339-352, 2012.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 11. | | GRATTAPAGLIA, D.; RESENDE, M. D. V. de; RESENDE JUNIOR, M. F. R.; SANSALONI, C. P.; PETROLI, C. D.; MISSIAGGIA, A. A.; TAKAHASHI, E. K.; ZAMPROGNO, K. C.; KILIAN, A. Breeding by genomic selection: capturing the missing heritability of complex traits in forest trees. In: NEW PHYTOLOGIST SYMPOSIUM, 26., 2011, Nancy. Bioenergy trees. [S.l.]: INRA, 2011. p. 9.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Florestas; Embrapa Recursos Genéticos e Biotecnologia. |
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| 12. | | PETROLI, C. D.; SANSALONI, C. P; CARLING, J.; STEANE, D. A.; VAILLANCOURT, R. E.; MYBURG, A. M.; SILVA JUNIOR, O. B. da; PAPPAS JUNIOR, G. J.; KILIAN, A.; GRATTAPAGLIA, D. Genomic characterization of DArT markers based on high-density linkage analysis and physical mapping to the Eucalyptus genome. PLoS ONE, v. 7, n. 9, set. 2012.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 13. | | GRATTAPAGLIA, D.; SANSALONI, C. P.; PETROLI, C. D.; RESENDE JUNIOR, M. F. R.; FARIA, D. A.; MISSIAGGIA, A. A.; TAKAHASHI, E. K.; ZAMPROGNO, K. C.; KILIAN, A.; RESENDE, M. D. V. de. Genomic selection in Eucalyptus: marker assisted selection coming to reality in forest trees. In: PLANT & ANIMAL GENOMES CONFERENCE, 18., 2010, San Diego. Resumos.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Florestas. |
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| 14. | | HUDSON, C. J.; FREEMAN, J. S.; KULLAN, A. R. K.; PETROLI, C. D.; SANSALONI, C. P.; KILIAN, A.; DETERING, F.; GRATTAPAGLIA, D.; POTTS, B. M.; MYBURG, A. A.; VAILLANCOURT, R. E. A reference linkage map for Eucalyptus. BMC Genomics, 13:240, 2012. (Open access).| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 15. | | RESENDE, M. D. V. de; RESENDE JUNIOR, M. F. R.; SANSALONI, C. P.; PETROLI, C. D.; MISSIAGGIA, A. A.; AGUIAR, A. M.; ABAD, J. M.; TAKAHASHI, E. K.; ROSADO, A. M.; FARIA, D. A.; PAPPAS JUNIOR, G. J.; KILIAN, A.; GRATTAPAGLIA, D. Genomic selection for growth and wood quality in Eucalyptus: capturing the missing heritability and accelerating breeding for complex traits in forest trees. New Phytologist, v. 194, p. 116-128, 2012.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Florestas; Embrapa Recursos Genéticos e Biotecnologia. |
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| 16. | | HIPPOLYTE, I.; BAKRY, F.; SEGUIN, M.; GARDES, L.; RIVALLAN, R.; RISTERUCCI, A. M.; JENNY, C.; PERRIER, X.; CARREEL, F.; ARGOUT, X.; PIFFANELLI, P.; KHAN, I. A.; MILLER, R. N. G.; PAPPAS JUNIOR, G. J.; MBÉGUIÉ-A-MBÉGUIÉ, D.; MATSUMOTO, T.; BERNARDINIS, V. de; HUTTNER, E.; KILIAN, A; BAURENS, F. C.; D'HONT, A.; COTE, F.; COURTOIS, B.; GLASZMANN, J. C. A saturated SSR/DArT linkage map of Musa acuminata addressing genome rearrangements among bananas. BMC Plant Biology, v. 10, n. 65, 2010.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 17. | | HICKEY, J. M.; CHIURUGWI, T.; MACKAY, I.; POWELL, W.; EGGEN, A.; KILIAN, A.; JONES, C.; CANALES, C.; GRATTAPAGLIA, D.; BASSI, F.; ATLIN, G.; GORJANC, G.; DAWSON, I.; RABBI, I.; RIBAUT, J.-M.; RUTKOSKI, J.; BENZIE, J.; LIGHTNER, J.; MWACHARO, J.; PARMENTIER, J.; ROBBINS, K.; SKOT, L.; WOLFE, M.; ROUARD, M.; CLARK, M.; AMER, P.; GARDINER, P.; HENDRE, P.; MRODE, R.; SIVASANKAR, S.; RASMUSSEN, S.; GROH, S.; JACKSON, V.; THOMAS, W.; BEYENE, Y. Genomic prediction unifies animal and plant breeding programs to form platforms for biological discovery. Nature Genetics, v. 49, p. 1297-1303, 2017.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 18. | | D'HONT, A.; DENOEUD, F.; AURY, J. M.; BAURENS, F. C.; CARREEL, F.; GARSMEUR, O.; NOEL, B.; BOCS, S.; DROC, G.; ROUARD, M.; SILVA, C. da; JABBARI, K.; CARDI, C.; POULAIN, J.; SOUQUET, M.; LABADIE, K.; JOURDA, C.; LENGELLÉ. J.; RODIER-GOUD, M.; ALBERTI, A.; BERNARD, M.; CORREA, M.; AYYAMPALAYAM, S.; MCKAIN, M. R.; LEEBENS-MACK, J.; BURGESS, D.; FREELING, M.; MBÉGUIÉ-A-MBÉGUIÉ, D.; CHABANNES, M.; WICKER, T.; PANAUD, O.; BARBOSA, J.; HRIBOVA, E.; HESLOP-HARRISON, P.; HABAS, R.; RIVALLAN, R.; FRANCOIS, P.; POIRON, C.; KILIAN, A.; BURTHIA, D.; JENNY, C.; BAKRY, F.; BROWN, S.; GUIGNON, V.; KEMA, G.; RODRIGUEZ, M. A. D.; WAALWIJK, C.; JOSEPH, S.; DIEVART, A.; JAILLON, O.; LECLERCQ, J.; ARGOUT, X.; LYONS, E.; ALMEIDA, A.; JERIDI, M.; DOLEZEL, J.; ROUX, N.; RISTERUCCI, A. M.; WEISSENBACH, J.; RUIZ, M.; GLASZMANN, J. C.; QUÉTIER, F.; YAHIAOUI, N.; WINCKER, P. The banana (Musa acuminata) genome and the evolution of monocotyledonous plants. Nature, v. 488, August, 2012.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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| 19. | | GOODWIN, S. B.; M’BAREK, S. B.; DHILLON, B.; WITTENBERG, A. H. J.; CRANE, C. F.; HANE, J. K.; FOSTER, A. J.; LEE, T. A. J. van der; GRIMWOOD, J.; AERTS, A.; ANTONIW, J.; BAILEY, A.; BLUHM, B.; BOWLER, J.; BRISTOW, J.; BURGT, A. van der; CANTO CANCHE, B.; CHURCHILL, A. C. L.; CONDE FERRÀEZ, L.; COOLS, H. J.; COUTINHO, P. M.; CSUKAI, M.; DEHAL, P.; WIT, P. de; DONZELLI, B.; GEEST, H. C. van de; HAM, R. C. H. H. van; HAMMOND KOSACK, K. E.; HENRISSAT, B.; KILIAN, A.; KOBAYASHI, A. K.; KOOPMANN, E.; KOURMPETIS, Y.; KUZNIAR, A.; LINDQUIST, E.; LOMBARD, V.; MALIEPAARD, C.; MARTINS, N. F.; MEHRABI, R.; NAP, J. P. H.; PONOMARENKO, A.; RUDD, J. J.; SALAMOV, A.; SCHMUTZ, J.; SCHOUTEN, H. J.; SHAPIRO, H.; STERGIOPOULOS, I.; TORRIANI, S. F. F.; TU, H.; VRIES, R. P. de; WAALWIJK, C.; WARE, S. B.; WIEBENGA, A.; ZWIERS, L.; OLIVER, R. P.; GRIGORIEV, I. V.; KEMA, G. H. J. Finished genome of the fungal wheat pathogen Mycosphaerella graminicola Reveals dispensome structure, chromosome plasticity, and stealth pathogenesis. Plos Genetics, v. 7, n. 6, e1002070, 2011.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Meio-Norte; Embrapa Recursos Genéticos e Biotecnologia. |
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| Registros recuperados : 19 | |
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| Nenhum registro encontrado para a expressão de busca informada. |
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