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Registros recuperados : 20 | |
1. | | ALKIMIM, E. R.; SOUSA, T. V.; SILVA, F. L. da; SAKIYAMA, N. S.; ZAMBOLIM, L.; CAIXETA, E. T. Identificação e validação de marcadores SNP em Coffea canephora usando sequenciamento de nova geração. In: CONGRESSO BRASILEIRO DE MELHORAMENTO DE PLANTAS, 9., 2017, Foz de Iguaçu. Melhoramento de plantas: projetando o futuro. Maringá, PR: SBMP, 2017. p. 552 Biblioteca(s): Embrapa Café. |
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3. | | SOUSA, T. V. de; FRANCO, L. J. D.; SILVA, K. J. D. e; ROCHA, M. de M.; HASHIMOTO, J. M. Composição bromatológica e de elementos minerais em grãos de linhagens elites de feijão-mungo. In: JORNADA DE INICIAÇÃO CIENTÍFICA DA EMBRAPA MEIO-NORTE, 8., 2022, Teresina. Anais... Teresina: Embrapa Meio-Norte, 2023. p. 36. (Embrapa Meio-Norte. Documentos, 291). Biblioteca(s): Embrapa Meio-Norte. |
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4. | | SETOTAW, T. A.; CAIXETA, E. T.; ZAMBOLIM, E. M.; SOUSA, T. V.; PEREIRA, A. A.; OLIVEIRA, A. C. B. de; CRUZ, C. D.; ZAMBOLIM, L.; SAKYAMA, N. S. Genome introgression of Híbrido de Timor and its potential to develop high cup quality C. arabica cultivars. Journal of Agricultural Science, v. 12, n. 4, p. 64-76, 2020. Biblioteca(s): Embrapa Café. |
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5. | | CORDEIRO, M. H. M.; BRUCKNER, C. H.; ROSADO, R. D. S.; SANTOS, C. E. M. dos; CAIXETA, E. T.; SOUSA, T. V.; CRUZ, C. D. Contribution of male genitors in open-pollination progenies of sour passion fruit. Euphytica, v. 216, n. 9, 2020. Biblioteca(s): Embrapa Café. |
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6. | | CAIXETA, E. T.; RESENDE, M. D. V. de; ALKIMIM, E. R.; SOUSA, T. V.; OLIVEIRA, A. C. B. de; PEREIRA, A. A.; ALVES, R. S. Aceleração do melhoramento do cafeeiro via seleção genômica: agilidade e eficácia no lançamento de novas cultivares. Brasília, DF: Embrapa Café, 2022. 54 p. PDF. (Embrapa Café. Documentos, 17). Projeto SI04 - Genotipagem e seleção genômica em populações de melhoramento de Coffea arabica. Biblioteca(s): Embrapa Café. |
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7. | | ALKIMIM, E. R.; CAIXETA, E. T.; SOUSA, T. V.; PEREIRA, A. A.; OLIVEIRA, A. C. B. de; ZAMBOLIM, L.; SAKIYAMA, N. S. Marker-assisted selection provides arabica coffee with genes from other Coffea species targeting on multiple resistance to rust and coffee berry disease. Molecular Breeding, v. 37, n. 6, p. 1-10, jan. 2017. Biblioteca(s): Embrapa Café. |
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8. | | CRUZ, A. F.; SIVA, L. F.; SOUSA, T. V.; NICOLI, A.; PAULA JUNIOR, T. J. de; CAIXETA, E. T.; ZAMBOLIM, L. Molecular diversity in Fusarium oxysporum isolates from common bean fields in Brazil. European Journal of Plant Pathology, v. 152, n. 2, p. 343-354, 2018. Biblioteca(s): Embrapa Café. |
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9. | | SOUSA, T. V.; CAIXETA, E. T.; ALKIMIM, E. R.; OLIVEIRA, A. C. B. de; PEREIRA, A. A.; ZAMBOLIM, L.; SAKIYAMA, N. S. Molecular markers useful to discriminate Coffea arabica cultivars with high genetic similarity. Euphytica, v. 213, n. 3, March, 2017. Biblioteca(s): Embrapa Café. |
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10. | | SOUSA, T. V.; ALKIMIM, E. R.; OLIVEIRA, A. C. B. de; PEREIRA, A. A.; SAKIYAMA, N. S.; ZAMBOLIM, L.; CAIXETA, E. T. Estrutura de populações e diversidade genética de Coffea arabica analisadas por marcadores moleculares SNP. In: CONGRESSO BRASILEIRO DE MELHORAMENTO DE PLANTAS, 9., 2017, Foz de Iguaçu. Melhoramento de plantas: projetando o futuro. Maringá, PR: SBMP, 2017. p. 533 Biblioteca(s): Embrapa Café. |
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11. | | RESENDE, M. D. V. de; OLIVEIRA, A. C. B. de; CAIXETA, E. T.; ALKIMIM, E. R.; SOUSA, T. V.; PEREIRA, A. A.; ALVES, R. S.; AZEVEDO, C. F. Tamanho amostral e detecção de genes via GWAS em características quantitativas do cafeeiro. Brasília, DF: Embrapa Café, 2022. 23 p. (Embrapa Café. Circular técnica, 7). Biblioteca(s): Embrapa Café. |
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12. | | SOUSA, T. V.; CAIXETA, E. T.; ALKIMIM, E. R.; OLIVEIRA, A. C. B. de; PEREIRA, A. A.; SAKIYAMA, N. S.; ZAMBOLIM, L.; RESENDE, M. D. V. de. Early Selection Enabled by the Implementation of Genomic Selection in Coffea arabica Breeding. Frontiers in Plant Science, v. 9, January 2019. Biblioteca(s): Embrapa Café; Embrapa Florestas. |
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13. | | SOUSA, T. V.; CAIXETA, E. T.; ALKIMIM, E. R.; OLIVEIRA, A. C. B. de; PEREIRA, A. A.; ZAMBOLIM, E. M.; ZAMBOLIM, L.; SAKIYAMA, N. S. Caracterização molecular de cultivares de café resistentes à ferrugem. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 8., 2013, Salvador. Sustentabilidade e inclusão Social. Brasília, DF: Embrapa Café, 2013. Biblioteca(s): Embrapa Café. |
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14. | | MEDEIROS, A. C.; CAIXETA, E. T.; OLIVEIRA, A. C. B. de; SOUSA, T. V.; STOCK, V. de M.; CRUZ, C. D.; ZAMBOLIM, L.; PEREIRA, A. P. Combining ability and molecular marker approach identified genetic resources to improve agronomic performance in coffea arabica breeding. Frontiers in Sustainable Food Systems, v. 5, 705278, 2021. Biblioteca(s): Embrapa Café. |
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15. | | SOUSA, T. V.; CAIXETA, E. T.; ALKIMIM, E. R.; OLIVEIRA, A. C. B. de; PEREIRA, A. A.; SAKIYAMA, N. S.; RESENDE JÚNIOR, M. F. R. de; ZAMBOLIM, L. Population structure and genetic diversity of coffee progenies derived from Catuaí and Híbrido de Timor revealed by genome-wide SNP marker. Tree Genetics & Genomes, v. 13, n. 6, Dec. 2017. Biblioteca(s): Embrapa Café. |
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16. | | ALKIMIM, E. R.; CAIXETA, E. T.; SOUSA, T. V.; OLIVEIRA, A. C. B. de; PEREIRA, A. A.; ZAMBOLIM, E. M.; ZAMBOLIM, L.; SAKIYAMA, N. S. Seleção assistida por marcadores moleculares para resistência à ferrugem do cafeeiro. In: CONGRESSO BRASILEIRO DE MELHORAMENTO DE PLANTAS, 8., 2015, Goiânia. O melhoramento de plantas, o futuro da agricultura e a soberania nacional: anais. Goiânia: UFG: SBMP, 2015. Biblioteca(s): Embrapa Café. |
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17. | | ALKIMIM, E. R.; CAIXETA, E. T.; SOUSA, T. V.; RESENDE, M. D. V. de; SILVA, F. L. da; SAKIYAMA, N. S.; ZAMBOLIM, L. Selective efficiency of genome-wide selection in Coffea canephora breeding. Tree Genetics & Genomes, v. 16, n. 3, p. 1-11, 2020. Biblioteca(s): Embrapa Café. |
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18. | | SILVA, L. de F.; ALKIMIM, E. R.; BARREIRO, P. R. R. M.; LEICHTWEIS, B. G.; SILVA, A. C. A.; SILVA, R. A. da; SOUSA, T. V.; NASCIMENTO, M.; CAIXETA, E. T. Genome-wide association study of plant architecture and diseases resistance in Coffea canephora. Euphytica, v. 218, jun. 2022. 13 p. Biblioteca(s): Embrapa Café. |
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19. | | GUEDES, M. C.; RODRIGUES, E. G.; AUCA, E. C.; TORRES, D. del C.; WADT, L. H. de O.; GOMES, J. K. da S.; NEVES, E. de S.; SOUSA, T. V. A. de. Alternativas de baixo custo para produção de mudas. In: WADT, L. H. de O.; MAROCCOLO, J. F.; GUEDES, M. C.; SILVA, K. E. da (ed.). Castanha-da-amazônia: estudos sobre a espécie e sua cadeia de valor. Brasília, DF: Embrapa, 2023. v. 4, cap. 3, p. 65-87. ODS 2, ODS 3, ODS 8, ODS 11, ODS 12, ODS 13, ODS 17. Biblioteca(s): Embrapa Amapá; Embrapa Rondônia. |
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20. | | ALKIMIM, E. R.; CAIXETA, E. T.; SOUSA, T. V.; GOIS, I. B.; SILVA, F. L. da; SAKIYAMA, N. S.; ZAMBOLIM, L.; ALVES, R. S.; RESENDE, M. D. V. de. Designing the best breeding strategy for Coffea canephora: Genetic evaluation of pure and hybrid individuals aiming to select for productivity and disease resistance traits. Plos One, v. 16, n. 12, e0260997, 2021. Biblioteca(s): Embrapa Café. |
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Registros recuperados : 20 | |
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Registro Completo
Biblioteca(s): |
Embrapa Café. |
Data corrente: |
25/09/2020 |
Data da última atualização: |
25/09/2020 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Circulação/Nível: |
A - 2 |
Autoria: |
ALKIMIM, E. R.; CAIXETA, E. T.; SOUSA, T. V.; SILVA, F. L. da; SAKYAMA, N. S.; ZAMBOLIM, L. |
Afiliação: |
EMILLY RUAS ALKIMIM, UNIVERSIDADE FEDERAL DE VIÇOSA; EVELINE TEIXEIRA CAIXETA MOURA, CNPCa; TIAGO VIEIRA SOUSA, UNIVERSIDADE FEDERAL DE VIÇOSA; FELIPE LOPES DA SILVA, UNIVERSIDADE FEDERAL DE VIÇOSA; NEY SUSSUMU SAKIYAMA, UNIVERSIDADE FEDERAL DE VIÇOSA; LAÉRCIO ZAMBOLIM, UNIVERSIDADE FEDERAL DE VIÇOSA. |
Título: |
High-throughput targeted genotyping using next-generation sequencing applied in Coffea canephora breeding. |
Ano de publicação: |
2018 |
Fonte/Imprenta: |
Euphytica, v. 214, p. 50, 2018. |
DOI: |
https://doi.org/10.1007/s10681-018-2126-2 |
Idioma: |
Inglês |
Conteúdo: |
The use of molecular markers to detect polymorphism at DNA level is one of the most significant developments in molecular biology techniques. With the development of new next-generation sequencing technologies, the discovery of SNP became easier and faster, and the costs of data point were reduced. The development and use of SNP markers for coffee have provided new perspectives for the evaluation of genetic diversity and population structure via different statistical approaches. In this study, 72 Coffea canephora genotypes were analyzed to identify the SNP markers and apply them to genetic studies and selection of parents/hybrids in genetic breeding. As many as 117,450 SNP were identified using the RAPiD Genomics platform. After quality analyses, 33,485 SNP were validated for analyses of genetic diversity and population structure. Genotypes were separated based on their varietal groups, and Hybrids were differentiated using the clustering and Bayesian approach. Coffee accessions mistakenly identified in the germplasm and breeding program were detected. The Conilon varietal group presented the lowest genetic dissimilarity values, suggesting the introduction of new accessions in the germplasm bank. The highest genetic distances values were observed among genotypes of the heterotic groups (Conilon and Robusta). The markers were efficient in evaluating the genetic diversity and population structure of C. canephora. Promising crosses were selected within and between the varietal groups. Hybrids with greater genetic distances were selected, which were important for C. canephora breeding programs. MenosThe use of molecular markers to detect polymorphism at DNA level is one of the most significant developments in molecular biology techniques. With the development of new next-generation sequencing technologies, the discovery of SNP became easier and faster, and the costs of data point were reduced. The development and use of SNP markers for coffee have provided new perspectives for the evaluation of genetic diversity and population structure via different statistical approaches. In this study, 72 Coffea canephora genotypes were analyzed to identify the SNP markers and apply them to genetic studies and selection of parents/hybrids in genetic breeding. As many as 117,450 SNP were identified using the RAPiD Genomics platform. After quality analyses, 33,485 SNP were validated for analyses of genetic diversity and population structure. Genotypes were separated based on their varietal groups, and Hybrids were differentiated using the clustering and Bayesian approach. Coffee accessions mistakenly identified in the germplasm and breeding program were detected. The Conilon varietal group presented the lowest genetic dissimilarity values, suggesting the introduction of new accessions in the germplasm bank. The highest genetic distances values were observed among genotypes of the heterotic groups (Conilon and Robusta). The markers were efficient in evaluating the genetic diversity and population structure of C. canephora. Promising crosses were selected within and between the varietal ... Mostrar Tudo |
Thesaurus NAL: |
Hybrids; Polymorphism; Population structure. |
Categoria do assunto: |
-- |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/216202/1/Alkimim-et-al-2018-1.pdf
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Marc: |
LEADER 02307naa a2200229 a 4500 001 2125108 005 2020-09-25 008 2018 bl uuuu u00u1 u #d 024 7 $ahttps://doi.org/10.1007/s10681-018-2126-2$2DOI 100 1 $aALKIMIM, E. R. 245 $aHigh-throughput targeted genotyping using next-generation sequencing applied in Coffea canephora breeding.$h[electronic resource] 260 $c2018 520 $aThe use of molecular markers to detect polymorphism at DNA level is one of the most significant developments in molecular biology techniques. With the development of new next-generation sequencing technologies, the discovery of SNP became easier and faster, and the costs of data point were reduced. The development and use of SNP markers for coffee have provided new perspectives for the evaluation of genetic diversity and population structure via different statistical approaches. In this study, 72 Coffea canephora genotypes were analyzed to identify the SNP markers and apply them to genetic studies and selection of parents/hybrids in genetic breeding. As many as 117,450 SNP were identified using the RAPiD Genomics platform. After quality analyses, 33,485 SNP were validated for analyses of genetic diversity and population structure. Genotypes were separated based on their varietal groups, and Hybrids were differentiated using the clustering and Bayesian approach. Coffee accessions mistakenly identified in the germplasm and breeding program were detected. The Conilon varietal group presented the lowest genetic dissimilarity values, suggesting the introduction of new accessions in the germplasm bank. The highest genetic distances values were observed among genotypes of the heterotic groups (Conilon and Robusta). The markers were efficient in evaluating the genetic diversity and population structure of C. canephora. Promising crosses were selected within and between the varietal groups. Hybrids with greater genetic distances were selected, which were important for C. canephora breeding programs. 650 $aHybrids 650 $aPolymorphism 650 $aPopulation structure 700 1 $aCAIXETA, E. T. 700 1 $aSOUSA, T. V. 700 1 $aSILVA, F. L. da 700 1 $aSAKYAMA, N. S. 700 1 $aZAMBOLIM, L. 773 $tEuphytica$gv. 214, p. 50, 2018.
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