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Registro Completo |
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Biblioteca(s): |
Embrapa Meio Ambiente. |
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Data corrente: |
25/11/2019 |
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Data da última atualização: |
25/11/2019 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
PEREZ-JARAMILLO, J. E.; HOLLANDER, M. de; RAMÍREZ, C. A.; MENDES, R.; RAAIJMAKERS, J. M.; CARRIÓN, V. J. |
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Afiliação: |
JUAN ESTEBAN PEREZ-JARAMILLO, Netherlands Institute of Ecology; MATTIAS DE HOLLANDER, Netherlands Institute of Ecology; CAMILO ANDRES RAMIREZ, University of Antioquia; RODRIGO MENDES, CNPMA; JOS M RAAIJMAKERS, Netherlands Institute of Ecology; VICTOR J CARRION, Leiden University. |
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Título: |
Deciphering rhizosphere microbiome assembly of wild and modern common bean (Phaseolus vulgaris) in native and agricultural soils from Colombia. |
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Ano de publicação: |
2019 |
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Fonte/Imprenta: |
Microbiome, v. 7, 2019. Article 114. |
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DOI: |
https://doi.org/10.1186/s40168-019-0727-1 |
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Idioma: |
Inglês |
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Conteúdo: |
Abstract: Background: Modern crop varieties are typically cultivated in agriculturally well-managed soils far from the centers oforigin of their wild relatives. How this habitat expansion impacted plant microbiome assembly is not well understood. Results: Here, we investigated if the transition from a native to an agricultural soil affected rhizobacterial communityassembly of wild and modern common bean (Phaseolus vulgaris) and if this led to a depletion of rhizobacterialdiversity. The impact of the bean genotype on rhizobacterial assembly was more prominent in the agriculturalsoil than in the native soil. Although only 113 operational taxonomic units (OTUs) out of a total of 15,925 wereshared by all eight bean accessions grown in native and agricultural soils, this core microbiome represented a largefraction (25.9%) of all sequence reads. More OTUs were exclusively found in the rhizosphere of common bean in theagricultural soil as compared to the native soil and in the rhizosphere of modern bean accessions as compared to wildaccessions. Co-occurrence analyses further showed a reduction in complexity of the interactions in the beanrhizosphere microbiome in the agricultural soil as compared to the native soil. |
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Palavras-Chave: |
Common bean; Core microbiome; Networks; Wild and modern accessions. |
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Thesagro: |
Feijão; Rizosfera. |
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Thesaurus Nal: |
domestication; Microbiome; Phaseolus; rhizosphere. |
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Categoria do assunto: |
S Ciências Biológicas |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/205381/1/Mendes-Rhizosphere-Bean-2019.pdf
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Marc: |
LEADER 02174naa a2200313 a 4500
001 2115028
005 2019-11-25
008 2019 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.1186/s40168-019-0727-1$2DOI
100 1 $aPEREZ-JARAMILLO, J. E.
245 $aDeciphering rhizosphere microbiome assembly of wild and modern common bean (Phaseolus vulgaris) in native and agricultural soils from Colombia.$h[electronic resource]
260 $c2019
520 $aAbstract: Background: Modern crop varieties are typically cultivated in agriculturally well-managed soils far from the centers oforigin of their wild relatives. How this habitat expansion impacted plant microbiome assembly is not well understood. Results: Here, we investigated if the transition from a native to an agricultural soil affected rhizobacterial communityassembly of wild and modern common bean (Phaseolus vulgaris) and if this led to a depletion of rhizobacterialdiversity. The impact of the bean genotype on rhizobacterial assembly was more prominent in the agriculturalsoil than in the native soil. Although only 113 operational taxonomic units (OTUs) out of a total of 15,925 wereshared by all eight bean accessions grown in native and agricultural soils, this core microbiome represented a largefraction (25.9%) of all sequence reads. More OTUs were exclusively found in the rhizosphere of common bean in theagricultural soil as compared to the native soil and in the rhizosphere of modern bean accessions as compared to wildaccessions. Co-occurrence analyses further showed a reduction in complexity of the interactions in the beanrhizosphere microbiome in the agricultural soil as compared to the native soil.
650 $adomestication
650 $aMicrobiome
650 $aPhaseolus
650 $arhizosphere
650 $aFeijão
650 $aRizosfera
653 $aCommon bean
653 $aCore microbiome
653 $aNetworks
653 $aWild and modern accessions
700 1 $aHOLLANDER, M. de
700 1 $aRAMÍREZ, C. A.
700 1 $aMENDES, R.
700 1 $aRAAIJMAKERS, J. M.
700 1 $aCARRIÓN, V. J.
773 $tMicrobiome$gv. 7, 2019. Article 114.
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Registro original: |
Embrapa Meio Ambiente (CNPMA) |
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Registro Completo
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Biblioteca(s): |
Embrapa Pecuária Sudeste. |
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Data corrente: |
11/11/2016 |
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Data da última atualização: |
11/11/2016 |
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Tipo da produção científica: |
Resumo em Anais de Congresso |
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Autoria: |
LIMA, A. O. de; OLIVEIRA, P. S. N. de; TIZIOTO, P. C.; AFONSO, J.; SOMAVILLA, A. L.; DINIZ, W. J. da S.; SILVA, J. V. da; ROCHA, M. I. P.; MUDADU, M. de A.; COUTINHO, L. L.; REGITANO, L. C. de A. |
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Afiliação: |
Andressa O. de Lima, UFSCAR; Priscila S. N. de Oliveira, EMBRAPA PECUÁRIA SUDESTE; Polyana C. Tizioto, EMBRAPA PECUÁRIA SUDESTE; Juliana Afonso, UFSCAR; Adriana L. Somavilla, The Roslin Institute, Edinburgh, United Kingdom; Wellison J. da S. Diniz, UFSCAR; Juliana V. da Silva, UFSCAR; Marina I. P. Rocha, UFSCAR; MAURICIO DE ALVARENGA MUDADU, CNPTIA; Luiz L. Coutinho, ESALQ/USP; LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE. |
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Título: |
Association analyses pointed the TIPARP as a potential candidate gene influencing residual feed intake variation in Nelore cattle. |
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Ano de publicação: |
2016 |
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Fonte/Imprenta: |
INTERNATIONAL MEETING OF ADVANCES IN ANIMAL SCIENCE, 1., 2016, Jaboticabal. Resumos... Jaboticabal: PPGZ Unesp, 2016. ref. 45135. |
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ISSN: |
2448-4385 |
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Idioma: |
Português |
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Palavras-Chave: |
Haplótipo; SNPs. |
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Thesagro: |
Gado de corte; Gado nelore. |
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Thesaurus NAL: |
Haplotypes; Nellore. |
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Categoria do assunto: |
G Melhoramento Genético |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/149937/1/Association-analyses-pointed-the-TIPARP-as-a-potential-candidate-gene-influencing-residual-feed-intake-variation-in-Nelore-cattle.pdf
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Marc: |
LEADER 00989nam a2200301 a 4500
001 2056239
005 2016-11-11
008 2016 bl uuuu u00u1 u #d
022 $a2448-4385
100 1 $aLIMA, A. O. de
245 $aAssociation analyses pointed the TIPARP as a potential candidate gene influencing residual feed intake variation in Nelore cattle.$h[electronic resource]
260 $aINTERNATIONAL MEETING OF ADVANCES IN ANIMAL SCIENCE, 1., 2016, Jaboticabal. Resumos... Jaboticabal: PPGZ Unesp, 2016. ref. 45135.$c2016
650 $aHaplotypes
650 $aNellore
650 $aGado de corte
650 $aGado nelore
653 $aHaplótipo
653 $aSNPs
700 1 $aOLIVEIRA, P. S. N. de
700 1 $aTIZIOTO, P. C.
700 1 $aAFONSO, J.
700 1 $aSOMAVILLA, A. L.
700 1 $aDINIZ, W. J. da S.
700 1 $aSILVA, J. V. da
700 1 $aROCHA, M. I. P.
700 1 $aMUDADU, M. de A.
700 1 $aCOUTINHO, L. L.
700 1 $aREGITANO, L. C. de A.
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Registro original: |
Embrapa Pecuária Sudeste (CPPSE) |
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