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| Registros recuperados : 110 | |
| 21. |  | BARBOSA, T.; FALEIRO, F. G.; JUNQUEIRA, N. T. V.; OLIVEIRA, J. da S.; SILVA JUNIOR, O. B. da; GRATTAPAGLIA, D. Caracterização e diversidade genética de híbridos e genitores de Passiflora edulis Sims com base em marcadores SNPs. Revista MT Horticultura, v. 9, n. 1, p. 20, 2023. Na publicação: Orzenil Bonfim Silva Júnior. Apresentado no VIII Simpósio Brasileiro da Cultura do Maracujazeiro, Tangará da Serra, MT.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 22. | | BARBOSA, T.; FALEIRO, F. G.; JUNQUEIRA, N. T. V.; OLIVEIRA, J. da S.; SILVA JUNIOR, O. B. da; GRATTAPAGLIA, D. Caracterização e diversidade genética de híbridos e genitores de Passiflora edulis Sims com base em marcadores SNPs. Revista MT Horticultura, v. 9, n. 1, p. 20, 2023. Na publicação: Orzenil Bonfim Silva Júnior. Apresentado no VIII Simpósio Brasileiro da Cultura do Maracujazeiro, Tangará da Serra, MT.| Biblioteca(s): Embrapa Cerrados. |
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| 24. | | LIMA, B. M.; GARCIA, C.; ALMEIDA, A.; SILVA JUNIOR, O. B.; VENCOVSKY, R.; MANSFIELD, S. D.; GRATTAPAGLIA, D. Genome-wide prediction of individual tree ranking for growth, chemical and physical wood properties in Eucalyptus based on High-Density SNP Data from the EUChip60K. In: PLANT & ANIMAL GENOME CONFERENCE, 23., 2015, San Diego, CA. [Abstracts...]. San Diego: [s.n.], 2015. PAG 2015. Pôster P1230.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 31. | | ALENCAR; SILVA JUNIOR, O. B. da; TOGAWA, R. C.; COSTA, M.; REVERS, L. F.; PAPPAS JUNIOR, G. J. SNP discovery in apple cultivars using next generation sequencing. BMC Proceedings, v. 5, Suppl 7,p. P42, 2011. Edição dos resumos do IUFRO Tree Biotechnology Conference 2011: From Genomes to Integration, 2011, Arraial d Ajuda, Bahia.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 32. | | SILVA JUNIOR, O. B. da; RESENDE, L. V.; VIDAL, R. F.; BORDALLO, P. N.; SILVA, P. I. T.; MELO, D. S.; TOGAWA, R. C.; GRATTAPAGLIA, D. A chromosome-scale assembly of the cashew tree genome: leveraging the combined power of PacBio, DNA-Chromatin Proximity Ligation and SNP linkage maps. In: PLANT AND ANIMAL GENOME CONFERENCE, 25., 2017, San Diego. [Abstracts...]. San Diego, CA: [s.n.], 2017. W354.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 33. | | RESENDE, R. T.; PIEPHO,H.-P.; ROSA, G. J. M.; SILVA JUNIOR, O. B. da; SILVA, F. F. e; RESENDE, M. D. V. de; GRATTAPAGLIA, D. Enviromics in breeding: applications and perspectives on envirotypic-assisted selection. Theoretical and Applied Genetics, v. 134, n. 1, 2021. p. 95-112.| Biblioteca(s): Embrapa Café; Embrapa Recursos Genéticos e Biotecnologia. |
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| 34. | | SILVA, P. I. T.; SILVA JUNIOR, O. B. da; RESENDE, L. V.; SOUSA, V. A. de; AGUIAR, A. V. de; GRATTAPAGLIA, D. A 3K Axiom SNP array from a transcriptomewide SNP resource sheds new light on the genetic diversity and structure of the iconic subtropical conifer tree Araucaria angustifolia (Bert.) Kuntze. PLoS ONE, v. 15, n. 8, e0230404, 2020.| Biblioteca(s): Embrapa Florestas; Embrapa Recursos Genéticos e Biotecnologia. |
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| 35. | | MARTINS, A. M.; SILVA JUNIOR, O. B. da; NOVAES, E.; PAPPAS, M. de C. R.; FARIA, D. A. de; SCHMUTZ, J.; GRATTAPAGLIA, D.; PAPPAS JUNIOR, G. J. Allelic BAC sequencing in the highly heterozygous Eucalyptus genome reveals microcollinearity with variable patterns of haplotype diversity due to the movement of transposons. In: IUFRO TREE BIOTECHNOLOGY CONFERENCE, 2009, Whislter. Abstracts. [S.l.]: IUFRO, 2009. p. 51| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 36. | | PESSOA FILHO, M. A. C. de P.; SOUZA SOBRINHO, F. de; FRAGOSO, R. da R.; SILVA JUNIOR, O. B. da; FERREIRA, M. E. A draft genome assembly for the forage grass Urochloa ruziziensis based on single-molecule real-time sequencing. In: BRAZILIAN BIOTECHNOLOGY CONGRESS, 7.; BIOTECHNOLOGY IBERO-AMERICAN CONGRESS, 2., 2018, Brasília, DF. Proceedings... Brasília, DF: SBBiotec, 2018.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 37. | | PESSOA FILHO, M. A. C. de P.; SOUZA SOBRINHO, F. de; FRAGOSO, R. da R.; SILVA JUNIOR, O. B. da; FERREIRA, M. E. A draft genome assembly for the forage grass Urochloa ruziziensis based on single-molecule real-time sequencing. In: BRAZILIAN BIOTECHNOLOGY CONGRESS, 7.; BIOTECHNOLOGY IBERO-AMERICAN CONGRESS, 2., 2018, Brasília, DF. Proceedings... Brasília, DF: SBBiotec, 2018.| Biblioteca(s): Embrapa Cerrados. |
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| 38. | | SOBREIRO, M. B.; VIEIRA, L. D.; NUNES, R.; NOVAES, E.; COISSAC, E.; SILVA JUNIOR, O. B.; GRATTAPAGLIA, D.; COLLEVATTI, R. G. Chloroplast genome assembly of Handroanthus impetiginosus: comparative analysis and molecular evolution in Bignoniaceae. Planta, v. 252, 91, 2020.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 39. | | PESSOA FILHO, M. A. C. de P.; SILVA, P. I. T.; RESENDE, L. V.; VIEIRA, E. A.; FALEIRO, F. G.; GRATTAPAGLIA, D.; SILVA JUNIOR, O. B. da. Application of the Axiom 3K SNP genotyping array in cassava breeding and genetics. In: PLANT AND ANIMAL GENOME CONFERENCE, 26., 2018, San Diego. Proceedings... Jersey City, NJ: Scherago International, 2018. PAG XXVI| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 40. | | PESSOA FILHO, M. A. C. de P.; SILVA, P. I. T.; RESENDE, L. V.; VIEIRA, E. A.; FALEIRO, F. G.; GRATTAPAGLIA, D.; SILVA JUNIOR, O. B. da. Application of the Axiom 3K SNP genotyping array in cassava breeding and genetics. In: PLANT AND ANIMAL GENOME CONFERENCE, 26., 2018, San Diego. Proceedings... Jersey City, NJ: Scherago International, 2018. PAG XXVI| Biblioteca(s): Embrapa Cerrados. |
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| Registros recuperados : 110 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Hortaliças; Embrapa Recursos Genéticos e Biotecnologia; Embrapa Semiárido. |
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Data corrente: |
07/12/2022 |
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Data da última atualização: |
06/01/2023 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
SANTOS, C. A. F.; COSTA, S. R. da; BOITEUX, L. S.; GRATTAPAGLIA, D.; SILVA JUNIOR, O. B. da. |
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Afiliação: |
CARLOS ANTONIO FERNANDES SANTOS, CPATSA; SONIANE RODRIGUES DA COSTA, Universidade Estadual de Feira de Santana, Feira de Santana, Bahia; LEONARDO SILVA BOITEUX, CNPH; DARIO GRATTAPAGLIA, Cenargen; ORZENIL BONFIM DA SILVA JUNIOR, Cenargen. |
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Título: |
Genetic associations with resistance to Meloidogyne enterolobii in guava (Psidium sp.) using cross-genera SNPs and comparative genomics to Eucalyptus highlight evolutionary conservation across the Myrtaceae. |
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Ano de publicação: |
2022 |
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Fonte/Imprenta: |
PLoS ONE, v. 17, n. 11, e0273959, 2022. |
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DOI: |
https://doi.org/ 10.1371/journal.pone.0273959 |
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Idioma: |
Inglês |
|
Conteúdo: |
Tropical fruit tree species constitute a yet untapped supply of outstanding diversity of taste and nutritional value, barely developed from the genetics standpoint, with scarce or no genomic resources to tackle the challenges arising in modern breeding practice. We generated a de novo genome assembly of the Psidium guajava, the super fruit “apple of the tropics”, and successfully transferred 14,268 SNP probesets from Eucalyptus to Psidium at the nucleo- tide level, to detect genomic loci linked to resistance to the root knot nematode (RKN) Meloi- dogyne enterolobii derived from the wild relative P. guineense. Significantly associated loci with resistance across alternative analytical frameworks, were detected at two SNPs on chromosome 3 in a pseudo-assembly of Psidium guajava genome built using a syntenic path approach with the Eucalyptus grandis genome to determine the order and orientation of the contigs. The P. guineense-derived resistance response to RKN and disease onset is conceivably triggered by mineral nutrients and phytohormone homeostasis or signaling with the involvement of the miRNA pathway. Hotspots of mapped resistance quantitative trait loci and functional annotation in the same genomic region of Eucalyptus provide further indirect support to our results, highlighting the evolutionary conservation of genomes across genera of Myrtaceae in the adaptation to pathogens. Marker assisted introgression of the resistance loci mapped should accelerate the development of improved guava cultivars and hybrid rootstocks. MenosTropical fruit tree species constitute a yet untapped supply of outstanding diversity of taste and nutritional value, barely developed from the genetics standpoint, with scarce or no genomic resources to tackle the challenges arising in modern breeding practice. We generated a de novo genome assembly of the Psidium guajava, the super fruit “apple of the tropics”, and successfully transferred 14,268 SNP probesets from Eucalyptus to Psidium at the nucleo- tide level, to detect genomic loci linked to resistance to the root knot nematode (RKN) Meloi- dogyne enterolobii derived from the wild relative P. guineense. Significantly associated loci with resistance across alternative analytical frameworks, were detected at two SNPs on chromosome 3 in a pseudo-assembly of Psidium guajava genome built using a syntenic path approach with the Eucalyptus grandis genome to determine the order and orientation of the contigs. The P. guineense-derived resistance response to RKN and disease onset is conceivably triggered by mineral nutrients and phytohormone homeostasis or signaling with the involvement of the miRNA pathway. Hotspots of mapped resistance quantitative trait loci and functional annotation in the same genomic region of Eucalyptus provide further indirect support to our results, highlighting the evolutionary conservation of genomes across genera of Myrtaceae in the adaptation to pathogens. Marker assisted introgression of the resistance loci mapped should accelerate the development ... Mostrar Tudo |
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Palavras-Chave: |
Meloidogyne enterolobii. |
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Thesagro: |
Goiaba; Melhoramento Genético Vegetal; Myrtaceae; Psidium Guajava. |
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Thesaurus NAL: |
Guavas; Psidium. |
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Categoria do assunto: |
G Melhoramento Genético |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1149297/1/Genetic-associations-with-resistance-to-Meloidogyne-enterolobii-in-guava-2022.pdf
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Marc: |
LEADER 02466naa a2200265 a 4500
001 2149297
005 2023-01-06
008 2022 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/ 10.1371/journal.pone.0273959$2DOI
100 1 $aSANTOS, C. A. F.
245 $aGenetic associations with resistance to Meloidogyne enterolobii in guava (Psidium sp.) using cross-genera SNPs and comparative genomics to Eucalyptus highlight evolutionary conservation across the Myrtaceae.$h[electronic resource]
260 $c2022
520 $aTropical fruit tree species constitute a yet untapped supply of outstanding diversity of taste and nutritional value, barely developed from the genetics standpoint, with scarce or no genomic resources to tackle the challenges arising in modern breeding practice. We generated a de novo genome assembly of the Psidium guajava, the super fruit “apple of the tropics”, and successfully transferred 14,268 SNP probesets from Eucalyptus to Psidium at the nucleo- tide level, to detect genomic loci linked to resistance to the root knot nematode (RKN) Meloi- dogyne enterolobii derived from the wild relative P. guineense. Significantly associated loci with resistance across alternative analytical frameworks, were detected at two SNPs on chromosome 3 in a pseudo-assembly of Psidium guajava genome built using a syntenic path approach with the Eucalyptus grandis genome to determine the order and orientation of the contigs. The P. guineense-derived resistance response to RKN and disease onset is conceivably triggered by mineral nutrients and phytohormone homeostasis or signaling with the involvement of the miRNA pathway. Hotspots of mapped resistance quantitative trait loci and functional annotation in the same genomic region of Eucalyptus provide further indirect support to our results, highlighting the evolutionary conservation of genomes across genera of Myrtaceae in the adaptation to pathogens. Marker assisted introgression of the resistance loci mapped should accelerate the development of improved guava cultivars and hybrid rootstocks.
650 $aGuavas
650 $aPsidium
650 $aGoiaba
650 $aMelhoramento Genético Vegetal
650 $aMyrtaceae
650 $aPsidium Guajava
653 $aMeloidogyne enterolobii
700 1 $aCOSTA, S. R. da
700 1 $aBOITEUX, L. S.
700 1 $aGRATTAPAGLIA, D.
700 1 $aSILVA JUNIOR, O. B. da
773 $tPLoS ONE$gv. 17, n. 11, e0273959, 2022.
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Embrapa Semiárido (CPATSA) |
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