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Registro Completo |
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Biblioteca(s): |
Embrapa Meio Ambiente. |
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Data corrente: |
10/01/2019 |
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Data da última atualização: |
10/01/2019 |
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Tipo da produção científica: |
Resumo em Anais de Congresso |
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Autoria: |
CARRION, V. J.; PÉREZ-JARAMILLO, J.; CORDOVEZ, V.; HOLLANDER, M. de; TRACANNA, V.; MENDES, L. W.; MENDES, R.; MEDEMA, M. H.; RAAIJMAKERS, J. M. |
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Afiliação: |
Victor J Carrion, Netherlands Institute of Ecology (NIOO-KNAW), Netherlands; Juan PÉREZ-JARAMILLO, Netherlands Institute of Ecology (NIOO-KNAW), Netherlands; Viviane Cordovez, Neethrlands Institutee of Ecology (NIOO-KNAW), Netherlands; Mattias de Hollander, Netherlands Institute of Ecology (NIOOKNAW), Netherlands; Mattias de Hollander, Wageningen University, Netherlands; Lucas W. Mendes, USP; RODRIGO MENDES, CNPMA; Marnix H Medema, Wageningen University, Netherlands; Jos M. Raaijmakers, Netherlands Institute of Ecology (NIOO-KNAW), Netherlands. |
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Título: |
Mining of the endophytic microbiome for novel biosynthetic genes and antifungal metabolites. |
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Ano de publicação: |
2018 |
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Fonte/Imprenta: |
In: PLANT MICROBIOME SYMPOSIUM, 2., 2018, Amsterdam. [Abstracts...] Amsterdam: Netherlands Institute of Ecology (NIOO-KNAW), 2018. |
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Idioma: |
Português |
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Conteúdo: |
Endophytic microbes have been proposed to contribute to a range of plant support functions, including nutrient acquisition and disease protection. To date, the molecular mechanisms underlying disease protection in the endosphere have only been studied for individual culturable organisms. Here, we conducted a systematic microbiome-wide perspective on the taxonomic diversity and functional potential of the endophytic microbiome of plants grown in an agricultural soil that is naturally suppressive to damping-off disease caused by the fungal root pathogen Rhizoctonia solani. Metagenomic analyses showed an enrichment of Burkholderiaceae, Chitinophagaceae and Xanthomonadaceae in the endosphere of plants grown in disease-suppressive soil challenged with the fungal root pathogen. Binning of the metagenomic sequences allowed de novo assembly of 25 high quality genomes of different endophytic bacterial genera. Subsequent trait-based analyses revealed numerous biosynthetic gene clusters (BGCs) overrepresented in the endophytic bacterial families of plants under fungal pathogen attack, including BGCs involved in signal transduction and antimicrobial activities, in particular nonribosomal peptides and polyketides. Network analyses further indicated that the traits enriched in the endophytic microbiome are multifactorial involving several novel BGCs encoding metabolites with yet unknown activities. |
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Thesaurus Nal: |
Antifungal agents; Metagenomics; Microbiome. |
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Categoria do assunto: |
H Saúde e Patologia |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/190146/1/RA-MendesR-2nd-PMS-2018-Mining...metabolites.pdf
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Marc: |
LEADER 02195nam a2200241 a 4500
001 2103500
005 2019-01-10
008 2018 bl uuuu u00u1 u #d
100 1 $aCARRION, V. J.
245 $aMining of the endophytic microbiome for novel biosynthetic genes and antifungal metabolites.$h[electronic resource]
260 $aIn: PLANT MICROBIOME SYMPOSIUM, 2., 2018, Amsterdam. [Abstracts...] Amsterdam: Netherlands Institute of Ecology (NIOO-KNAW)$c2018
520 $aEndophytic microbes have been proposed to contribute to a range of plant support functions, including nutrient acquisition and disease protection. To date, the molecular mechanisms underlying disease protection in the endosphere have only been studied for individual culturable organisms. Here, we conducted a systematic microbiome-wide perspective on the taxonomic diversity and functional potential of the endophytic microbiome of plants grown in an agricultural soil that is naturally suppressive to damping-off disease caused by the fungal root pathogen Rhizoctonia solani. Metagenomic analyses showed an enrichment of Burkholderiaceae, Chitinophagaceae and Xanthomonadaceae in the endosphere of plants grown in disease-suppressive soil challenged with the fungal root pathogen. Binning of the metagenomic sequences allowed de novo assembly of 25 high quality genomes of different endophytic bacterial genera. Subsequent trait-based analyses revealed numerous biosynthetic gene clusters (BGCs) overrepresented in the endophytic bacterial families of plants under fungal pathogen attack, including BGCs involved in signal transduction and antimicrobial activities, in particular nonribosomal peptides and polyketides. Network analyses further indicated that the traits enriched in the endophytic microbiome are multifactorial involving several novel BGCs encoding metabolites with yet unknown activities.
650 $aAntifungal agents
650 $aMetagenomics
650 $aMicrobiome
700 1 $aPÉREZ-JARAMILLO, J.
700 1 $aCORDOVEZ, V.
700 1 $aHOLLANDER, M. de
700 1 $aTRACANNA, V.
700 1 $aMENDES, L. W.
700 1 $aMENDES, R.
700 1 $aMEDEMA, M. H.
700 1 $aRAAIJMAKERS, J. M.
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Registro original: |
Embrapa Meio Ambiente (CNPMA) |
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Origem |
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Classificação |
Cutter |
Registro |
Volume |
Status |
URL |
Voltar
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Registro Completo
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Biblioteca(s): |
Embrapa Semiárido. |
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Data corrente: |
19/02/2021 |
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Data da última atualização: |
09/08/2023 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
B - 3 |
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Autoria: |
CAMPOS, M. S.; COELHO, E. F.; PEREIRA, B. L. da S.; MELO, D. M. de; SILVA, A. J. P. da; SIMOES, W. L. |
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Afiliação: |
MARCOS SOUZA CAMPOS, Federal University of Recôncavo da Bahia; EUGENIO FERREIRA COELHO, CNPMF; BRUNO LAÉCIO DA SILVA PEREIRA, Federal University of Recôncavo da Bahia; DIEGO MAGALHÃES DE MELO, Federal University of Recôncavo da Bahia; ALISSON JADAVI PEREIRA DA SILVA, Federal Institute of Education, Science and Technology from Bahia; WELSON LIMA SIMOES, CPATSA. |
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Título: |
Models to estimate potassium and nitrate in changes of ion concentration in soil solution in banana cultivation. |
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Ano de publicação: |
2020 |
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Fonte/Imprenta: |
Engenharia na Agricultura, v. 28, p. 451-459, 2020. |
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DOI: |
https://doi.org/10.13083/reveng.v29i1.8851 |
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Idioma: |
Inglês |
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Conteúdo: |
The adequate fertigation use bases on the application of nutrients by water according to crop needs throughout its cycle. The evaluation of nutrients in the soil solution may be faster if based upon soil electric conductivity and moisture by using parametric models. The objective of this study was to evaluate the sensitivity of two parametric models for estimating nitrate and potassium concentration in the soil solution under changes of ion concentration during a crop cycle. One model was that from Vogeler et al. (1996) in which ion concentration is a function of soil moisture and electrical conductivity; the other was the potential in which the concentration is a function of the electrical conductivity of the soil solution. The potential model presented a better performance compared to that of adapted from Vogeler, as for estimation of ion concentrations as for the sensitivity of this model to changes in concentration of this ion in the soil solution. The models showed greater sensitivity when fitted to data corresponding to all possible occurrences in the soil during the crop cycle. The model should consider a range of concentrations with the possible values of the soil solution along crop cycle. |
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Palavras-Chave: |
Aplicação de nutrientes; Ciclo da Cultura. |
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Thesagro: |
Fertirrigação; Irrigação Localizada; Solo. |
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Thesaurus NAL: |
Irrigation; Plant fertility; Soil fertility. |
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Categoria do assunto: |
A Sistemas de Cultivo |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/221340/1/MODELS-FOR-ESTIMATING-POTASSIUM-2020.pdf
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Marc: |
LEADER 02111naa a2200289 a 4500
001 2130151
005 2023-08-09
008 2020 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.13083/reveng.v29i1.8851$2DOI
100 1 $aCAMPOS, M. S.
245 $aModels to estimate potassium and nitrate in changes of ion concentration in soil solution in banana cultivation.$h[electronic resource]
260 $c2020
520 $aThe adequate fertigation use bases on the application of nutrients by water according to crop needs throughout its cycle. The evaluation of nutrients in the soil solution may be faster if based upon soil electric conductivity and moisture by using parametric models. The objective of this study was to evaluate the sensitivity of two parametric models for estimating nitrate and potassium concentration in the soil solution under changes of ion concentration during a crop cycle. One model was that from Vogeler et al. (1996) in which ion concentration is a function of soil moisture and electrical conductivity; the other was the potential in which the concentration is a function of the electrical conductivity of the soil solution. The potential model presented a better performance compared to that of adapted from Vogeler, as for estimation of ion concentrations as for the sensitivity of this model to changes in concentration of this ion in the soil solution. The models showed greater sensitivity when fitted to data corresponding to all possible occurrences in the soil during the crop cycle. The model should consider a range of concentrations with the possible values of the soil solution along crop cycle.
650 $aIrrigation
650 $aPlant fertility
650 $aSoil fertility
650 $aFertirrigação
650 $aIrrigação Localizada
650 $aSolo
653 $aAplicação de nutrientes
653 $aCiclo da Cultura
700 1 $aCOELHO, E. F.
700 1 $aPEREIRA, B. L. da S.
700 1 $aMELO, D. M. de
700 1 $aSILVA, A. J. P. da
700 1 $aSIMOES, W. L.
773 $tEngenharia na Agricultura$gv. 28, p. 451-459, 2020.
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