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| Registros recuperados : 112 | |
| 81. |  | NASCIMENTO, W. B. A.; SANTOS, C. M. dos; CESAR, M. J. da S. C.; BALDANI, J. I.; VIDAL, M. S.; SCHWAB, S. Avaliação do potencial de novos isolados de bactérias do gênero Sphingomonas para uso como inoculante na cultura da cana-de-açúcar. In: SEMANA CIENTÍFICA JOHANNA DÖBEREINER 21., 2021, Seropédica. A transversalidade da ciência, tecnologia e inovações para o planeta: caderno de resumos. Seropédica: Embrapa Agrobiologia, 2021.| Biblioteca(s): Embrapa Agrobiologia. |
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| 82. | | BALDANI, J. I.; CRUZ, L. M.; VIDAL, M. S.; ARAUJO, J. L. S. de; SCHWAB, S.; TEIXEIRA, K. R. dos S.; SOUZA, E. M.; PEDROSA, F. O.; FARINELLI. Draft genome sequente of six endophytic nittrogen-fixing bacteria with potential biofertilizer application in non-leguminous plants. In: INTERNATIONAL SYMPOSIUM ON BIOLOGICAL NITROGEN WITH NON-LEGUMES, 12.; INTERNATIONAL INCT SYMPOSIUM ON NITROGEN BIOLOGICAL FIXATION, 2., 03 a 8 de outubro, 2010, Búzios, RJ. Book of abstracts... Seropédica: Embrapa Agrobiologia, 2010. Slll. 05| Biblioteca(s): Embrapa Agrobiologia. |
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| 83. | | GUEDES, H. V.; RUWS, L F. M.; ALQUÉRES, S. M. C.; SCHWAB, S.; ARAUJO, J. L. S. de; MARTINS, O. B.; BALDANI, J. I. Análise de expressão da nitrogenase, glutamato sintase por em um mutante histidina quinase (GDI3079) de gluconacetobacter diazotrophicus In: CONGRESSO BRASILEIRO DE MICROBIOLOGIA, 25.,2009, Porto de Galinhas, PE. Anais... [São Paulo]: Sociedade Bras. de Microbiologia, 2009. 01 01 de 01| Biblioteca(s): Embrapa Agrobiologia. |
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| 84. | | BALDANI, J. I.; VIDEIRA, S. S.; QUESSADA, D.; BALDANI, V. L. D.; VIDAL, M. S.; SCHWAB, S.; ARAUJO, J. L. S. de; URQUIAGA, S. BNF in the bioenergy Pennisetum purpureum In: SYMPOSIUM ON BIOLOGICAL NITROGEN FIXATION WITH NON-LEGUMES, 15.; SYMPOSIUM OF THE EUROPEAN NITROGEN FIXATION CONFERENCE, 12., 2016, Hungary. Book of abstracts. Hungary: Biological Research Center, 2016.| Biblioteca(s): Embrapa Agrobiologia. |
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| 85. | | SCHWAB, S.; PESSOA, C. A.; BERGAMI, A. A. de L.; FIGUEIREDO, N. L. A.; TEIXEIRA, K. R. dos S.; BALDANI, J. I. Isolation and characterization of active promoters from Gluconacetobacter diazotrophicus strain PAL5 using a promoter-trapping plasmid Archives of Microbiology, v. 198, n. 5, p. 445?458, 2016.| Biblioteca(s): Embrapa Agrobiologia. |
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| 86. | | FERREIRA, N. S.; MATOS, G. F.; MENESES, C. H. G. de; REIS, V. M.; ROUWS, J. R. C.; SCHWAB, S.; BALDANI, J. I.; ROUWS, L. F. M. Interaction of phytohormone-producing rhizobia with sugarcane mini-setts and their effect on plant development Plant and Soil, Published online 3 January, 2020.| Biblioteca(s): Embrapa Agrobiologia. |
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| 87. | | FERREIRA, V. de L.; GALISA, P. de S.; SCHWAB, S.; VIDAL, M. S.; BALDANI, J. I.; ARAUJO, J. L. S. de. Caracterização da função de MatE em Gluconacetobacter diazotrophicus. In: SEMANA CIENTÍFICA JOHANNA DÖBEREINER, 10., 18 a 24 de outubro de 2010, Seropédica. Ciência para o Desenvolvimento Sustentável: anais... Seropédica: Embrapa Agrobiologia, 2010.| Biblioteca(s): Embrapa Agrobiologia. |
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| 88. | | SILVA, C. G. N. da; MONTEIRO, E. de C.; DINIZ, P. P.; TERRA, L. A.; SCHWAB, S.; REIS, V. M.; ARAUJO, J. L. S. de; URQUIAGA, S. Designing and validation of specifc primers for the quantitative detection of bacteria in sugarcane inoculant. Brazilian Journal of Microbiology, v. 54, p. 2627–2640, 2023.| Biblioteca(s): Embrapa Agrobiologia. |
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| 89. | | SILVA, C. G. N. da; MONTEIRO, E. de C.; DINIZ, P. P.; TERRA, L. A.; SCHWAB, S.; REIS, V. M.; ARAUJO, J. L. S. de; URQUIAGA, S. Designing and validation of specific primers for the quantitative detection of bacteria in sugarcane inoculant. Brazilian Journal of Microbiology,, Published: 16 October 2023| Biblioteca(s): Embrapa Agrobiologia. |
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| 90. | | SANTOS, C. M dos; SOUZA, D. G. de; BALSANELLI, E; CRUZ, L. M.; SOUZA, E. M. de; BALDANI, J. I.; SCHWAB, S. A culture independent approach to enrich endophytic bacterial cells from sugarcane stems for community characterization. Microbiol Ecology, v. 74, n. 2, p. 453-465, 2017.| Biblioteca(s): Embrapa Agrobiologia. |
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| 91. | | CAMELO, A.; BARRETO, C. P.; VIDAL, M. S.; ROUWS, J. R. C.; LEDO, F. J. da S.; SCHWAB, S.; BALDANI, J. I. Field response of two seed propagated elephant grass genotypes to diazotrophic bacterial inoculation and in situ confocal microscopy colonization analyses. Symbiosis, v. 83, n. 1, p. 41-53, 2021| Biblioteca(s): Embrapa Agrobiologia; Embrapa Gado de Leite. |
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| 92. | | TERRA, L. A.; SOARES, C. de P.; TADRA-SFEIR, M. Z.; SOUZA, E. M.; SILVEIRA, V.; BALDANI, J. I.; VIDAL, M. S.; SCHWAB, S. Transcriptome and proteome approaches for the diazotroph Nitrospirillum amazonense grown in sugarcane apoplast fluid. In: SYMPOSIUM ON BIOLOGICAL NITROGEN FIXATION, 16., LATINAMERICAN WORKSHOP OF PGPR, 4., RELARE, 19., 2018, Foz do Iguaçu. Book of abstract....Foz do Iguaçu: Emprapa, 2018. p. 52 Session 4, Poster IV.5| Biblioteca(s): Embrapa Agrobiologia. |
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| 93. | | TERRA, L. A.; SOARES, C. de P.; MENESES, C. H. G. de; SFEIR, T.; SOUZA, E. M. de; SILVEIRA, V.; VIDAL, M. S.; BALDANI, J. I.; SCHWAB, S. Transcriptome and proteome profiles of the diazotroph Nitrospirillum amazonense strain CBAmC in response to the sugarcane apoplast fluid Plant and Soil, v. 451, p. 145-168, 2020.| Biblioteca(s): Embrapa Agrobiologia. |
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| 94. | | SANTOS, C. M. dos; BALSANELLI, E.; SOUZA, E. M.; RIBERIRO, N. V. S.; SCHWAB, S.; VIDAL, M. S.; BALDANI, J. I. Understanding the apoplast bacterial community from sugarcane inoculated with a consortium of fi ve diazotrophic bacteria. In: SYMPOSIUM ON BIOLOGICAL NITROGEN FIXATION, 16.; LATINAMERICAN WORKSHOP OF PGPR, 4.; RELARE, 19., 2018, Foz do Iguaçu. Book of abstract....Foz do Iguaçu: Embrapa, 2018. p. 79 Session 6, Poster VI.33| Biblioteca(s): Embrapa Agrobiologia. |
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| 95. | | SCHWAB, S.; CRIVELARO, A. L. R.; WEISS, V. A.; SFEIR, M. Z. T.; FAORO, H.; CRUZ, L. M.; PEDROZA, F. de O.; SOUZA, E. M. de; BALDANI, J. I. Global transcriptional shift analysis of nitrogenase switch-off by glutamate in azospirillum amazonense strain CBAMC, isolated from sugarcane. In: INTERNATIONAL SYMPOSIUM ON BIOLOGICAL NITROGEN FIXATION WITH NON-LEGUMES, 13., 2012, Neuherberg, GE. Abstracts... Neuherberg: German Research Center for Environmental Health, 2012.| Biblioteca(s): Embrapa Agrobiologia. |
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| 96. | | ROUWS, L. F. M.; MENESES, C. H. G.; GALVÃO, P. G.; VENTURA, H, G.; DRECHSEL, M. M.; SILVA, R. J.; VIDAL, M. S.; SIMÕES-ARAUJO, J. L.; TEIXEIRA, K. R. S.; SCHWAB, S.; BALDANI, J. I. Functional analysis of Gluconacetobacter diazotrophicus PAL5 genes involved in the nitogen fixation process and interaction with the plant. INTERNATIONAL INCT SYMPOSIUM ON BIOLOGICAL NITROGEN FIXATION, 1., 2009, Curitiba. Program and index... Brasilia: INCT, 2009. 01p| Biblioteca(s): Embrapa Agrobiologia. |
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| 97. | | ROUWS, L. F. M.; MENESSES, C. H. G.; GALVÃO, P. G.; VENTURA, H. G.; DRECHSEL, M. M.; SILVA, R. J.; VIDAL, M. S.; SIMÕES-ARAUJO, J. L.; TEIXEIRA, K. R. S.; SCHWAB, S.; BALDANI, J. I. Functional analysis of Gluconacetobacter diazotrophicus PAL5 genes involved in the nitrogen fixation processs and interaction with the plant. INTERNATIONAL INCT SYMPOSIUM ON BIOLOGICAL NITROGEN FIXATION, 1., 2009, Curitiba. Program and index... Brasilia: INCT, 2009. 01p| Biblioteca(s): Embrapa Agrobiologia. |
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| 98. | | REIS, V. M.; PITARD, R. M.; DOURADO, F. dos S.; CAMACHO, N. N.; VIDEIRA, S. S.; CAMARGO, A. B.; BOA SORTE, P. F.; VIDAL, M. S.; SCHWAB, S.; BALDANI, J. I. Caracterização morfo-fisiológica e molecular das estirpres diazotróficas do inoculante de cana-de-açúcar. Seropédica: Embrapa Agrobiologia, 2011. (Embrapa Agrobiologia. Documentos, 280).| Biblioteca(s): Embrapa Agrobiologia. |
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| 99. | | BALDANI, J. I.; VIDEIRA, S. S.; TEIXEIRA, K. R. dos S.; REIS, V. M.; OLIVERIA, A. L. M. de; SCHWAB, S.; SOUZA, E. M.; PEDRAZA, R. O.; BALDANI, V. L. D.; HARTMANN, A. The family Rhodospirillaceae. In: ROSENBERG, E. (Ed.). The prokaryotes: Alphaproteobacteria and Betaproteobacteria. 4. ed. Heidelberg: Springer, 2014. p. 533-618| Biblioteca(s): Embrapa Agrobiologia. |
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| 100. | | SCHWAB, S.; MENEZES, J. dos S.; NASCIMENTO, W. B. A.; NASCIMENTO, B. P. do; FERREIRA, J. de P.; SANTOS, C. M. dos; VIGNA, B. B. Z.; MEIRELES, K. G. X.; VIDAL, M. S.; BALDANI, J. I. Desinfestação de sementes de plantas dos gêneros Paspalum e Brachiaria para ensaios de inoculação in vitro de bactéria fixadora de nitrogênio. Seropédica: Embrapa Agrobiologia, 2020. 22 p. (Embrapa Agrobiologia. Documentos, 314).| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| Registros recuperados : 112 | |
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 | Acesso ao texto completo restrito à biblioteca da Embrapa Agrobiologia. Para informações adicionais entre em contato com cnpab.biblioteca@embrapa.br. |
Registro Completo
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Biblioteca(s): |
Embrapa Agrobiologia. |
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Data corrente: |
20/10/2023 |
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Data da última atualização: |
20/10/2023 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 2 |
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Autoria: |
SILVA, C. G. N. da; MONTEIRO, E. de C.; DINIZ, P. P.; TERRA, L. A.; SCHWAB, S.; REIS, V. M.; ARAUJO, J. L. S. de; URQUIAGA, S. |
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Afiliação: |
CLEUDISON GABRIEL NASCIMENTO DA SILVA, UFRRJ; EDEVALDO DE CASTRO MONTEIRO, UFRRJ; PRISCILA PEREIRA DINIZ, UFRRJ; LEONARDO ARAUJO TERRA, UFRRJ; STEFAN SCHWAB, CNPAB; VERONICA MASSENA REIS, CNPAB; JEAN LUIZ SIMOES DE ARAUJO, CNPAB; SEGUNDO SACRAMENTO U CABALLERO, CNPAB. |
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Título: |
Designing and validation of specific primers for the quantitative detection of bacteria in sugarcane inoculant. |
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Ano de publicação: |
2023 |
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Fonte/Imprenta: |
Brazilian Journal of Microbiology,, Published: 16 October 2023 |
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ISSN: |
1678-4405 |
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Idioma: |
Inglês |
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Conteúdo: |
Endophytic diazotrophic plant growth-promoting bacteria Herbaspirillum rubrisubalbicans (HCC103), Herbaspirillum seropedicae (HRC54), Paraburkholderia tropica (Ppe8 T ), Gluconacetobacter diazotrophicus (Pal5 T ), and Nitrospirillum amazonense (CBAmC) have been used as inoculants for sugarcane. The genome sequences of these strains were used to design a set of specific primers for the real-time PCR (qPCR) assay. Primer specificity was confirmed by conventional PCR using the genomic DNAs of 25 related bacterial species and the five target strains. The qPCR assays were conducted using root and shoot samples from two sugarcane varieties (RB867515 and RB92579). These samples were collected both with and without inoculation, using the target strains specified in this study. The sugarcane plants were grown in a greenhouse, utilizing a substrate composed of sterile sand and vermiculite in a 2:1 ratio, for a duration of 55 days. The primers designed for this study successfully amplified target DNA fragments from each of the bacterial species, enabling their differentiation at the species level. The total bacterial population present in the sugarcane quantified using qPCR was on average 105.2 cells g−1 of fresh tissue. Across both evaluated varieties, it was observed that the population of inoculated bacteria tended to decrease over time and became more concentrated in the sugarcane roots compared to the aerial parts. The qPCR results suggest that both the host and the microbes influence the endophytic population and the bacterial number decreases with plant age MenosEndophytic diazotrophic plant growth-promoting bacteria Herbaspirillum rubrisubalbicans (HCC103), Herbaspirillum seropedicae (HRC54), Paraburkholderia tropica (Ppe8 T ), Gluconacetobacter diazotrophicus (Pal5 T ), and Nitrospirillum amazonense (CBAmC) have been used as inoculants for sugarcane. The genome sequences of these strains were used to design a set of specific primers for the real-time PCR (qPCR) assay. Primer specificity was confirmed by conventional PCR using the genomic DNAs of 25 related bacterial species and the five target strains. The qPCR assays were conducted using root and shoot samples from two sugarcane varieties (RB867515 and RB92579). These samples were collected both with and without inoculation, using the target strains specified in this study. The sugarcane plants were grown in a greenhouse, utilizing a substrate composed of sterile sand and vermiculite in a 2:1 ratio, for a duration of 55 days. The primers designed for this study successfully amplified target DNA fragments from each of the bacterial species, enabling their differentiation at the species level. The total bacterial population present in the sugarcane quantified using qPCR was on average 105.2 cells g−1 of fresh tissue. Across both evaluated varieties, it was observed that the population of inoculated bacteria tended to decrease over time and became more concentrated in the sugarcane roots compared to the aerial parts. The qPCR results suggest that both the host and the microbes... Mostrar Tudo |
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Palavras-Chave: |
Diazotrophic bacteria; DPGPB quantification; Primers; Real Time PCR. |
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Categoria do assunto: |
S Ciências Biológicas |
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Marc: |
LEADER 02378naa a2200265 a 4500
001 2157398
005 2023-10-20
008 2023 bl uuuu u00u1 u #d
022 $a1678-4405
100 1 $aSILVA, C. G. N. da
245 $aDesigning and validation of specific primers for the quantitative detection of bacteria in sugarcane inoculant.$h[electronic resource]
260 $c2023
520 $aEndophytic diazotrophic plant growth-promoting bacteria Herbaspirillum rubrisubalbicans (HCC103), Herbaspirillum seropedicae (HRC54), Paraburkholderia tropica (Ppe8 T ), Gluconacetobacter diazotrophicus (Pal5 T ), and Nitrospirillum amazonense (CBAmC) have been used as inoculants for sugarcane. The genome sequences of these strains were used to design a set of specific primers for the real-time PCR (qPCR) assay. Primer specificity was confirmed by conventional PCR using the genomic DNAs of 25 related bacterial species and the five target strains. The qPCR assays were conducted using root and shoot samples from two sugarcane varieties (RB867515 and RB92579). These samples were collected both with and without inoculation, using the target strains specified in this study. The sugarcane plants were grown in a greenhouse, utilizing a substrate composed of sterile sand and vermiculite in a 2:1 ratio, for a duration of 55 days. The primers designed for this study successfully amplified target DNA fragments from each of the bacterial species, enabling their differentiation at the species level. The total bacterial population present in the sugarcane quantified using qPCR was on average 105.2 cells g−1 of fresh tissue. Across both evaluated varieties, it was observed that the population of inoculated bacteria tended to decrease over time and became more concentrated in the sugarcane roots compared to the aerial parts. The qPCR results suggest that both the host and the microbes influence the endophytic population and the bacterial number decreases with plant age
653 $aDiazotrophic bacteria
653 $aDPGPB quantification
653 $aPrimers
653 $aReal Time PCR
700 1 $aMONTEIRO, E. de C.
700 1 $aDINIZ, P. P.
700 1 $aTERRA, L. A.
700 1 $aSCHWAB, S.
700 1 $aREIS, V. M.
700 1 $aARAUJO, J. L. S. de
700 1 $aURQUIAGA, S.
773 $tBrazilian Journal of Microbiology,, Published: 16 October 2023
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