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| Registros recuperados : 117 | |
| 41. |  | TOMAZ, M. A.; SAKIYAMA, N. S.; MARTINEZ, H. E. P.; PEREIRA, A. A.; ZAMBOLIM, L.; CRUZ, C. D. Grafted young coffee tree growth in a greenhouse. Crop Breeding and Applied Biotechnology, Londrina, v. 2, n. 3, p. 425-430, Sept. 2002.| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 44. | | SAKIYAMA, N. S.; CAIXETA, E. T.; SETOTAW, T. A.; ZAMBOLIM, E. M.; ZAMBOLIM, L.; PEREIRA, A. A. Híbrido de timor: a valuable source of genetic variability for arabica coffee. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 22. 2008, Campinas, São Paulo, Brazil.| Biblioteca(s): Embrapa Café. |
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| 45. | | DIOLA, V.; BRITO, G. G. de; CAIXETA, E. T.; MACIEL-ZAMBOLIM, E.; SAKIYAMA, N. S.; LOUREIRO, M. E. High-density genetic mapping for coffee leaf rust resistance. Tree Genetics & Genomes, v. 7, n. 6, p. 1199-1208, Dec. 2011.| Biblioteca(s): Embrapa Café. |
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| 47. | | ALVARENGA, S. M.; PINTO, G. B.; CAIXETA, E. T.; DIOLA, V.; ZAMBOLIM, E. M.; ZAMBOLIM, L.; SAKIYAMA, N. S. Identificação de cromossomo artificial de bactéria contendo gene de resistência a doenças em cafeeiro. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 7., 2011, Araxá. Anais... Brasília, DF: Embrapa Café, 2011.| Biblioteca(s): Embrapa Café. |
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| 48. | | PENA, G. F.; CAIXETA, E. T.; FERREIRA, J. L.; ZAMBOLIM, E. M.; ZAMBOLIM, L.; SAKIYAMA, N. S. Identificação e caracterização de microssatélites provenientes de sequências expressas do projeto brasileiro de genoma café. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 6., 2009, Vitória. Inovação científica, competitividade e mudanças climáticas: anais... Vitória: Consórcio Pesquisa Café, 2009.| Biblioteca(s): Embrapa Café. |
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| 49. | | ALKIMIM, E. R.; SOUSA, T. V.; SILVA, F. L. da; SAKIYAMA, N. S.; ZAMBOLIM, L.; CAIXETA, E. T. Identificação e validação de marcadores SNP em Coffea canephora usando sequenciamento de nova geração. In: CONGRESSO BRASILEIRO DE MELHORAMENTO DE PLANTAS, 9., 2017, Foz de Iguaçu. Melhoramento de plantas: projetando o futuro. Maringá, PR: SBMP, 2017. p. 552| Biblioteca(s): Embrapa Café. |
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| 50. | | SANTOS, J. C. F.; CUNHA, A. J. da; FERREIRA, F. A.; SANTOS, R. H. S.; SAKIYAMA, N. S. Influência da cobertura do solo com leguminosa perene no controle de plantas daninhas do café do cerrado. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 7., 2011, Araxá. Anais... Brasília, DF: Embrapa Café, 2011.| Biblioteca(s): Embrapa Café. |
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| 51. | | OLIVEIRA, A. C. B. de; SAKIYAMA, N. S.; CAIXETA, E. T.; ZAMBOLIM, E. M.; RUFINO, R. J. N.; ZAMBOLIM, L. Partial map of Coffea arabica L. and recovery of the recurrent parent in backcross progenies. Crop Breeding and Applied Biotechnology, Londrina, v. 7, n. 2, p. 196-203, Mar. 2007.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 52. | | ANDRADE, F. T.; CAIXETA, E. T.; MACIEL, B. H.; ALVARENGA, S. M.; ZAMBOLIM, E. M.; SAKIYAMA, N. S. Obtenção de ESTs potencialmente relacionadas à resistência do cafeeiro à ferrugem por meio de análise in silico. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 5., 2007, Águas de Lindóia, SP. Anais... Brasília, DF: Embrapa Café, 2007.| Biblioteca(s): Embrapa Café. |
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| 53. | | MACIEL, B. H.; CAIXETA, E. T.; ANDRADE, F. T.; ALVARENGA, S. M.; ZAMBOLIM, E. M.; SAKIYAMA, N. S. Obtenção de marcador molecular potencialmente envolvido com a resistência do cafeeiro à ferrugem. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 5., 2007, Águas de Lindóia, SP. Anais... Brasília, DF: Embrapa Café, 2007.| Biblioteca(s): Embrapa Café. |
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| 54. | | MISSIO, R. F.; CAIXETA, E. T.; ZAMBOLIM, E. M.; ZAMBOLIM, L.; CRUZ, C. D.; SAKIYAMA, N. S. Polymorphic information content of SSR markers for Coffea spp. Crop Breeding and Applied Biotechnology, Londrina, v. 10, n. 1, p. 89-94, Mar. 2010. Notes.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 55. | | ALVARENGA, S. M.; CAIXETA, E. T.; HUFNAGEL, B.; THIEBAUT, F.; ZAMBOLIM, E. M.; ZAMBOLIM, L.; SAKIYAMA, N. S. In silico identification of coffee genome expressed sequences potentially associated with resistance to diseases. GENETICS AND MOLECULAR BIOLOGY, v. 33, n.4, p. 795-806. 2010. 795-806| Biblioteca(s): Embrapa Café; Embrapa Unidades Centrais. |
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| 56. | | TEIXEIRA-CABRAL, T. A.; SAKIYAMA, N. S.; ZAMBOLIM, L.; PEREIRA, A. A.; BARROS, E. G.; SAKIYAMA, C. C. H. Reproducibility of the RAPD marker and its efficiency in coffee tree genotype grouping analysis. Crop Breeding and Applied Biotechnology, Londrina, v. 2, n. 1, p. 121-129, Mar. 2002.| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 57. | | SANTOS, J. C. F.; CUNHA, A. J. da; FERREIRA, F. A.; SANTOS, R. H. S.; SAKIYAMA, N. S. Supressão de plantas daninhas do café sob influência da consorciação com leguminosa herbácea. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 7., 2011, Araxá. Anais... Brasília, DF: Embrapa Café, 2011.| Biblioteca(s): Embrapa Café. |
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| 58. | | SILVA, D. G.; ZAMBOLIM, L.; SAKIYAMA, N. S.; FONSECA, A. F. A. da; PEREIRA, A. A.; TEIXEIRA, T. A. Uso de marcadores RAPD no estudo de variabilidade em clones de Coffea canephora Var. conillon. IN: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 1., 2000, Poços de Caldas. Resumos Expandidos. Brasília, DF: Embrapa Café/MINASPLAN, 2000.| Biblioteca(s): Embrapa Café. |
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| 59. | | ALVARENGA, S. M.; CAIXETA, E. T.; OLIVEIRA, A. C. B. de; RUFINO, R. J. N.; BRITO, G. G. de; PEREIRA, A. A.; ZAMBOLIM, L.; SAKIYAMA, N. S. Análise da diversidade genética de cafeeiros do Banco de Germoplasma da UFV/EPAMIG utilizando marcadores RAPD. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 4., 2005, Londrina. Anais... Brasília, DF: Embrapa Café, 2005.| Biblioteca(s): Embrapa Café. |
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| 60. | | DINIZ, L. E. C.; SAKIYAMA, N. S.; LASHERMES. P.; CAIXETA, E. T.; OLIVEIRA, A. C. B.; ZAMBOLIM, E. M.; LOUREIRO, M. E.; PEREIRA, A. A.; ZAMBOLIM, L. Analysis of AFLP markers associated to the Mex-1 resistance locus in Icatu progenies. Crop Breeding and Applied Biotechnology, Viçosa, MG, v. 5, n. 4, p. 387-393, Dec. 2005.| Biblioteca(s): Embrapa Arroz e Feijão. |
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| Registros recuperados : 117 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Café. |
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Data corrente: |
08/12/2017 |
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Data da última atualização: |
15/12/2017 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
SOUSA, T. V.; CAIXETA, E. T.; ALKIMIM, E. R.; OLIVEIRA, A. C. B. de; PEREIRA, A. A.; SAKIYAMA, N. S.; RESENDE JÚNIOR, M. F. R. de; ZAMBOLIM, L. |
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Afiliação: |
TIAGO VIEIRA SOUSA, BIOAGRO/Biocafé/UFV; EVELINE TEIXEIRA CAIXETA, SAPC; EMILLY RUAS ALKIMIM, BIOAGRO/Biocafé/UFV; ANTONIO CARLOS BAIAO DE OLIVEIRA, SAPC; ANTONIO ALVES PEREIRA, EPAMIG; NEY SUSSUMU SAKIYAMA, UFV; MARCIO FERNANDO RIBEIRO DE RESENDE JÚNIOR, Horticultural Sciences Department/University of Florida; LAÉRCIO ZAMBOLIM, DF/UFV. |
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Título: |
Population structure and genetic diversity of coffee progenies derived from Catuaí and Híbrido de Timor revealed by genome-wide SNP marker. |
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Ano de publicação: |
2017 |
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Fonte/Imprenta: |
Tree Genetics & Genomes, v. 13, n. 6, Dec. 2017. |
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Idioma: |
Inglês |
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Conteúdo: |
The use of single nucleotide polymorphism (SNP) molecular markers has provided advances in selection methodologies used in breeding programs of different crops, reducing cost and time of cultivar release. Despite the great economic and social importance of Coffea arabica, studies with SNP markers are scarce and a small number of SNP are available for this species, when compared with other crops of agronomic mportance. Thus, the objective of this study was to identify and validate SNP molecular markers for the species Coffea arabica and to introduce these markers to genetic breeding by means of an accurate analysis of the diversity and genetic structure of breeding populations of this species. After quality filtering, 11,187 SNP markers were selected from the coffee population obtained from crosses between the genotypes Catuaí and Híbrido de Timor. A great number of markers were distributed in the 11 chromosomes, within transcribed regions, and were used to estimate the genetic dissimilarity among the individuals of the breeding population. Dendrogram analysis and a Bayesian approach demonstrated the formation of two groups and the discrimination of all genotypes evaluated. The expressive number of SNP molecular markers distributed throughout C. arabica genome was efficient to discriminate all the accessions evaluated in the experiment, clustering them according to their genealogies. This work identified mixtures within the progenies. The genotyping data also provided detailed information about the parental genotypes and led to the identification of new candidate parents to be introduced to the breeding program. The study discussed population structure and its consequence in obtaining improved varieties of C. arabica. MenosThe use of single nucleotide polymorphism (SNP) molecular markers has provided advances in selection methodologies used in breeding programs of different crops, reducing cost and time of cultivar release. Despite the great economic and social importance of Coffea arabica, studies with SNP markers are scarce and a small number of SNP are available for this species, when compared with other crops of agronomic mportance. Thus, the objective of this study was to identify and validate SNP molecular markers for the species Coffea arabica and to introduce these markers to genetic breeding by means of an accurate analysis of the diversity and genetic structure of breeding populations of this species. After quality filtering, 11,187 SNP markers were selected from the coffee population obtained from crosses between the genotypes Catuaí and Híbrido de Timor. A great number of markers were distributed in the 11 chromosomes, within transcribed regions, and were used to estimate the genetic dissimilarity among the individuals of the breeding population. Dendrogram analysis and a Bayesian approach demonstrated the formation of two groups and the discrimination of all genotypes evaluated. The expressive number of SNP molecular markers distributed throughout C. arabica genome was efficient to discriminate all the accessions evaluated in the experiment, clustering them according to their genealogies. This work identified mixtures within the progenies. The genotyping data also provided detaile... Mostrar Tudo |
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Palavras-Chave: |
Molecular breeding; Next-generation sequence. |
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Thesagro: |
Coffea arabica. |
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Thesaurus NAL: |
Genetic relationships; Introgression; Teachers. |
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Categoria do assunto: |
-- |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/168492/1/Population-structure-and-genetic-diversity.pdf
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|
Marc: |
LEADER 02620naa a2200277 a 4500
001 2081931
005 2017-12-15
008 2017 bl uuuu u00u1 u #d
100 1 $aSOUSA, T. V.
245 $aPopulation structure and genetic diversity of coffee progenies derived from Catuaí and Híbrido de Timor revealed by genome-wide SNP marker.$h[electronic resource]
260 $c2017
520 $aThe use of single nucleotide polymorphism (SNP) molecular markers has provided advances in selection methodologies used in breeding programs of different crops, reducing cost and time of cultivar release. Despite the great economic and social importance of Coffea arabica, studies with SNP markers are scarce and a small number of SNP are available for this species, when compared with other crops of agronomic mportance. Thus, the objective of this study was to identify and validate SNP molecular markers for the species Coffea arabica and to introduce these markers to genetic breeding by means of an accurate analysis of the diversity and genetic structure of breeding populations of this species. After quality filtering, 11,187 SNP markers were selected from the coffee population obtained from crosses between the genotypes Catuaí and Híbrido de Timor. A great number of markers were distributed in the 11 chromosomes, within transcribed regions, and were used to estimate the genetic dissimilarity among the individuals of the breeding population. Dendrogram analysis and a Bayesian approach demonstrated the formation of two groups and the discrimination of all genotypes evaluated. The expressive number of SNP molecular markers distributed throughout C. arabica genome was efficient to discriminate all the accessions evaluated in the experiment, clustering them according to their genealogies. This work identified mixtures within the progenies. The genotyping data also provided detailed information about the parental genotypes and led to the identification of new candidate parents to be introduced to the breeding program. The study discussed population structure and its consequence in obtaining improved varieties of C. arabica.
650 $aGenetic relationships
650 $aIntrogression
650 $aTeachers
650 $aCoffea arabica
653 $aMolecular breeding
653 $aNext-generation sequence
700 1 $aCAIXETA, E. T.
700 1 $aALKIMIM, E. R.
700 1 $aOLIVEIRA, A. C. B. de
700 1 $aPEREIRA, A. A.
700 1 $aSAKIYAMA, N. S.
700 1 $aRESENDE JÚNIOR, M. F. R. de
700 1 $aZAMBOLIM, L.
773 $tTree Genetics & Genomes$gv. 13, n. 6, Dec. 2017.
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