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| 4. |  | MENDES, R.; GARBEVA, P.; RAAIJMAKERS, J. M. The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms. FEMS Microbiology Reviews, Bethesda, v. 37, n. 5, p. 634-663, 2013.| Biblioteca(s): Embrapa Meio Ambiente. |
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| 17. | | VOORT, M. van der; KEMPENAAR, M.; DRIEL, M.; RAAIJMAKERS, J. M.; MENDES, R. Impact of soil heat on reassembly of bacterial communities in the rhizosphere microbiome and plant disease suppression. Ecology Letters, Oxford, v. 19, n. 4, p. 375-382, 2016.| Biblioteca(s): Embrapa Meio Ambiente. |
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| 19. | | PÉREZ-JARAMILLO, J. E.; CARRION, V. J.; HOLLANDER, M. de; MENDES, R.; RAAIJMAKERS, J. M. The spermosphere effect: building up plant microbiome assembly. In: CONGRESS OF EUROPEAN MICROBIOLOGISTS - FEMS, 7., 2017, Valencia, Spain. Abstract Book... Valencia: Federation of European Microbiological Society (FEMS), 2017. Ref. FEMS7-2470.| Biblioteca(s): Embrapa Meio Ambiente. |
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| 20. | | BRAGA, L. P.; TANENTZAP, A. J.; LEE, B.; TSAI, S. M.; RAAIJMAKERS, J. M.; MENDES, R.; MENDES, L. W. Diversity of viruses and viroids in the rhizosphere of common bean cultivars differing in resistance to the fungal root pathogen Fusarium oxysporum. Applied Soil Ecology, v. 190, article 105018, 2023.| Biblioteca(s): Embrapa Meio Ambiente. |
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Registro Completo
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Biblioteca(s): |
Embrapa Meio Ambiente. |
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Data corrente: |
25/11/2019 |
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Data da última atualização: |
25/11/2019 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
PEREZ-JARAMILLO, J. E.; HOLLANDER, M. de; RAMÍREZ, C. A.; MENDES, R.; RAAIJMAKERS, J. M.; CARRIÓN, V. J. |
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Afiliação: |
JUAN ESTEBAN PEREZ-JARAMILLO, Netherlands Institute of Ecology; MATTIAS DE HOLLANDER, Netherlands Institute of Ecology; CAMILO ANDRES RAMIREZ, University of Antioquia; RODRIGO MENDES, CNPMA; JOS M RAAIJMAKERS, Netherlands Institute of Ecology; VICTOR J CARRION, Leiden University. |
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Título: |
Deciphering rhizosphere microbiome assembly of wild and modern common bean (Phaseolus vulgaris) in native and agricultural soils from Colombia. |
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Ano de publicação: |
2019 |
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Fonte/Imprenta: |
Microbiome, v. 7, 2019. Article 114. |
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DOI: |
https://doi.org/10.1186/s40168-019-0727-1 |
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Idioma: |
Inglês |
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Conteúdo: |
Abstract: Background: Modern crop varieties are typically cultivated in agriculturally well-managed soils far from the centers oforigin of their wild relatives. How this habitat expansion impacted plant microbiome assembly is not well understood. Results: Here, we investigated if the transition from a native to an agricultural soil affected rhizobacterial communityassembly of wild and modern common bean (Phaseolus vulgaris) and if this led to a depletion of rhizobacterialdiversity. The impact of the bean genotype on rhizobacterial assembly was more prominent in the agriculturalsoil than in the native soil. Although only 113 operational taxonomic units (OTUs) out of a total of 15,925 wereshared by all eight bean accessions grown in native and agricultural soils, this core microbiome represented a largefraction (25.9%) of all sequence reads. More OTUs were exclusively found in the rhizosphere of common bean in theagricultural soil as compared to the native soil and in the rhizosphere of modern bean accessions as compared to wildaccessions. Co-occurrence analyses further showed a reduction in complexity of the interactions in the beanrhizosphere microbiome in the agricultural soil as compared to the native soil. |
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Palavras-Chave: |
Common bean; Core microbiome; Networks; Wild and modern accessions. |
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Thesagro: |
Feijão; Rizosfera. |
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Thesaurus NAL: |
domestication; Microbiome; Phaseolus; rhizosphere. |
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Categoria do assunto: |
S Ciências Biológicas |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/205381/1/Mendes-Rhizosphere-Bean-2019.pdf
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Marc: |
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100 1 $aPEREZ-JARAMILLO, J. E.
245 $aDeciphering rhizosphere microbiome assembly of wild and modern common bean (Phaseolus vulgaris) in native and agricultural soils from Colombia.$h[electronic resource]
260 $c2019
520 $aAbstract: Background: Modern crop varieties are typically cultivated in agriculturally well-managed soils far from the centers oforigin of their wild relatives. How this habitat expansion impacted plant microbiome assembly is not well understood. Results: Here, we investigated if the transition from a native to an agricultural soil affected rhizobacterial communityassembly of wild and modern common bean (Phaseolus vulgaris) and if this led to a depletion of rhizobacterialdiversity. The impact of the bean genotype on rhizobacterial assembly was more prominent in the agriculturalsoil than in the native soil. Although only 113 operational taxonomic units (OTUs) out of a total of 15,925 wereshared by all eight bean accessions grown in native and agricultural soils, this core microbiome represented a largefraction (25.9%) of all sequence reads. More OTUs were exclusively found in the rhizosphere of common bean in theagricultural soil as compared to the native soil and in the rhizosphere of modern bean accessions as compared to wildaccessions. Co-occurrence analyses further showed a reduction in complexity of the interactions in the beanrhizosphere microbiome in the agricultural soil as compared to the native soil.
650 $adomestication
650 $aMicrobiome
650 $aPhaseolus
650 $arhizosphere
650 $aFeijão
650 $aRizosfera
653 $aCommon bean
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653 $aNetworks
653 $aWild and modern accessions
700 1 $aHOLLANDER, M. de
700 1 $aRAMÍREZ, C. A.
700 1 $aMENDES, R.
700 1 $aRAAIJMAKERS, J. M.
700 1 $aCARRIÓN, V. J.
773 $tMicrobiome$gv. 7, 2019. Article 114.
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Embrapa Meio Ambiente (CNPMA) |
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