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Registro Completo |
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Biblioteca(s): |
Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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Data corrente: |
11/12/2018 |
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Data da última atualização: |
05/02/2019 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
SOUZA, M. M. de; ZERLOTINI NETO, A.; GEISTLINGER, L.; TIZIOTO, P. C.; TAYLOR, J. F.; ROCHA, M. I. P.; DINIZ, W. J. S.; COUTINHO, L. L.; REGITANO, L. C. de A. |
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Afiliação: |
MARCELA M. DE SOUZA, UFSCar; ADHEMAR ZERLOTINI NETO, CNPTIA; LUDWIG GEISTLINGER, CPPSE; POLYANA C. TIZIOTO, NGS Genomic Solution; JEREMY F. TAYLOR, University of Missouri; MARINA I. P. ROCHA, UFSCar; WELLISON J. S. DINIZ, UFSCar; LUIZ L. COUTINHO, USP; LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE. |
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Título: |
A comprehensive manually-curated compendium of bovine transcription factors. |
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Ano de publicação: |
2018 |
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Fonte/Imprenta: |
Scientific Reports, v. 8, p. 1-12, 2018. |
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DOI: |
10.1038/s41598-018-32146-2 |
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Idioma: |
Inglês |
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Notas: |
Article number: 13747. Na publicação: Adhemar Zerlotini, Luciana C. A. Regitano. |
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Conteúdo: |
Transcription factors (TFs) are pivotal regulatory proteins that control gene expression in a contextdependent and tissue-specific manner. In contrast to human, where comprehensive curated TF collections exist, bovine TFs are only rudimentary recorded and characterized. In this article, we present a manually-curated compendium of 865 sequence-specific DNA-binding bovines TFs, which we analyzed for domain family distribution, evolutionary conservation, and tissue-specific expression. In addition, we provide a list of putative transcription cofactors derived from known interactions with the identified TFs. Since there is a general lack of knowledge concerning the regulation of gene expression in cattle, the curated list of TF should provide a basis for an improved comprehension of regulatory mechanisms that are specific to the species. |
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Palavras-Chave: |
DNA bovine; DNA bovino; Expressão gênica; Gene expression in cattle. |
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Thesaurus Nal: |
Gene expression regulation. |
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Categoria do assunto: |
G Melhoramento Genético |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/189042/1/AP-Comprehensive-Adhemar-etal.pdf
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/188184/1/ComprehensiveManuallyCurated.pdf
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Marc: |
LEADER 01793naa a2200301 a 4500
001 2102174
005 2019-02-05
008 2018 bl uuuu u00u1 u #d
024 7 $a10.1038/s41598-018-32146-2$2DOI
100 1 $aSOUZA, M. M. de
245 $aA comprehensive manually-curated compendium of bovine transcription factors.$h[electronic resource]
260 $c2018
500 $aArticle number: 13747. Na publicação: Adhemar Zerlotini, Luciana C. A. Regitano.
520 $aTranscription factors (TFs) are pivotal regulatory proteins that control gene expression in a contextdependent and tissue-specific manner. In contrast to human, where comprehensive curated TF collections exist, bovine TFs are only rudimentary recorded and characterized. In this article, we present a manually-curated compendium of 865 sequence-specific DNA-binding bovines TFs, which we analyzed for domain family distribution, evolutionary conservation, and tissue-specific expression. In addition, we provide a list of putative transcription cofactors derived from known interactions with the identified TFs. Since there is a general lack of knowledge concerning the regulation of gene expression in cattle, the curated list of TF should provide a basis for an improved comprehension of regulatory mechanisms that are specific to the species.
650 $aGene expression regulation
653 $aDNA bovine
653 $aDNA bovino
653 $aExpressão gênica
653 $aGene expression in cattle
700 1 $aZERLOTINI NETO, A.
700 1 $aGEISTLINGER, L.
700 1 $aTIZIOTO, P. C.
700 1 $aTAYLOR, J. F.
700 1 $aROCHA, M. I. P.
700 1 $aDINIZ, W. J. S.
700 1 $aCOUTINHO, L. L.
700 1 $aREGITANO, L. C. de A.
773 $tScientific Reports$gv. 8, p. 1-12, 2018.
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Registro original: |
Embrapa Agricultura Digital (CNPTIA) |
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 | Acesso ao texto completo restrito à biblioteca da Embrapa Solos. Para informações adicionais entre em contato com cnps.biblioteca@embrapa.br. |
Registro Completo
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Biblioteca(s): |
Embrapa Solos. |
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Data corrente: |
19/10/2021 |
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Data da última atualização: |
19/10/2021 |
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Tipo da produção científica: |
Artigo em Anais de Congresso |
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Autoria: |
PINTO, G. da R. B.; MEDEIROS, S. P. J.; STRAUCH, J. C. M.; SOUZA, J. M. de; MARQUES, C. R. F. |
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Afiliação: |
GUSTAVO DA ROCHA B. PINTO, UFRJ; SERGIO PALMA J. MEDEIROS, UFRJ; JULIA CELIA MERCEDES STRAUCH, CNPS; JANO MOREIRA DE SOUZA, UFRJ; CARLETE R. F. MARQUES, UFRJ. |
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Título: |
X-Arc spatial data integration in the SPeCS collaborative design framework. |
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Ano de publicação: |
2001 |
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Fonte/Imprenta: |
In: INTERNATIONAL CONFERENCE ON COMPUTER SUPPORTED COOPERATIVE WORK IN DESIGN, 6., 2001, London, Canada. Proceedings... Ottawa: NRC Research Press, 2001. p. 56-60. |
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DOI: |
https://doi.org/10.1109/CSCWD.2001.942231 |
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Idioma: |
Inglês |
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Conteúdo: |
X-Arc is a Web-based architecture for the integration and sharing of spatial data sources in an XML (Extensible Markup Language) format that applies meta data and mediation concepts. It is an important component of SPeCS (Spatial Decision Collaborative Support System), an architecture which intends to support the aspects of multi-criteria spatial analysis within a distributed GIS with tools that can help a group cope with all activities in this kind of project. In the X-Arc framework, the availability and computing capabilities of data sources, as well as the heterogeneity of its data (structure, format, type and meta data) are explored by the data mediation and publishing services. Through SPeCS users can cooperate, collaborate and coordinate their integration activities during their spatial analysis. The work presents a framework that supports the georeferencing of argumentations and allows transparent access to heterogeneous data sources involving the members of the design team in a spatial collaborative context. |
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Palavras-Chave: |
GIS. |
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Thesaurus NAL: |
Geographic information systems; Management systems. |
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Categoria do assunto: |
P Recursos Naturais, Ciências Ambientais e da Terra |
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Marc: |
LEADER 01806nam a2200205 a 4500
001 2135447
005 2021-10-19
008 2001 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.1109/CSCWD.2001.942231$2DOI
100 1 $aPINTO, G. da R. B.
245 $aX-Arc spatial data integration in the SPeCS collaborative design framework.$h[electronic resource]
260 $aIn: INTERNATIONAL CONFERENCE ON COMPUTER SUPPORTED COOPERATIVE WORK IN DESIGN, 6., 2001, London, Canada. Proceedings... Ottawa: NRC Research Press, 2001. p. 56-60.$c2001
520 $aX-Arc is a Web-based architecture for the integration and sharing of spatial data sources in an XML (Extensible Markup Language) format that applies meta data and mediation concepts. It is an important component of SPeCS (Spatial Decision Collaborative Support System), an architecture which intends to support the aspects of multi-criteria spatial analysis within a distributed GIS with tools that can help a group cope with all activities in this kind of project. In the X-Arc framework, the availability and computing capabilities of data sources, as well as the heterogeneity of its data (structure, format, type and meta data) are explored by the data mediation and publishing services. Through SPeCS users can cooperate, collaborate and coordinate their integration activities during their spatial analysis. The work presents a framework that supports the georeferencing of argumentations and allows transparent access to heterogeneous data sources involving the members of the design team in a spatial collaborative context.
650 $aGeographic information systems
650 $aManagement systems
653 $aGIS
700 1 $aMEDEIROS, S. P. J.
700 1 $aSTRAUCH, J. C. M.
700 1 $aSOUZA, J. M. de
700 1 $aMARQUES, C. R. F.
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