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| Registros recuperados : 74 | |
| 41. |  | SOUZA, M. M.; MOKRY, F. C.; TIZIOTO, P. C.; OLIVEIRA, P. S. N.; SOMAVILLA, A.; CESAR, A. S. M.; MORÉ, D.; MOURÃO, G.; DINIZ, W. J. S.; MUDADU, M. A.; NICIURA, S. C. M.; COUTINHO, L. L.; ZERLOTINI, A.; REGITANO, L. C. Allele specific expression analysis in bovine muscle tissue. In: INTERNATIONAL CONFERENCE OF THE AB3C, 11.; BRAZILIAN SYMPOSIUM OF BIOINFORMATICS, 2015, São Paulo. Proceedings... [S.l.]: AB3C, 2015. p. 197. X-meeting 2015.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 42. | | SOUZA, M. M. de; ZERLOTINI NETO, A.; ROCHA, M. I. P.; BRUSCADIN, J. J.; DINIZ, W. J. da S.; CARDOSO, T. F.; CESAR, A. S. M.; AFONSO, J.; ANDRADE, B. G. N.; MUDADU, M. de A.; MOKRY, F. B.; TIZIOTO, P. C.; OLIVEIRA, P. S. N. de; NICIURA, S. C. M.; COUTINHO, L. L.; REGITANO, L. C. de A. Allele-specific expression is widespread in Bos indicus muscle and affects meat quality candidate genes. Scientific Reports, v. 10, n. 1, p. 1-11, 2020. Na publicação: Adhemar Zerlotini. Article number: 10204.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 43. | | ROCHA, M. I. P.; SOUZA, M. M. de; ZERLOTINI NETO, A.; TIZIOTO, P. C.; OLIVEIRA, P. S. N. de; LIMA, A. O. de; AFONSO, J.; DINIZ, W. J. da S.; BUSS, C. E.; COUTINHO, L. L.; REGITANO, L. C. de A.; NICIURA, S. C. M. LDHB gene has allele-specific expression in liver of Nelore cattle extremes for feed efficiency. In: WORKSHOP ON OMICS STRATEGIES APPLIED TO LIVESTOCK SCIENCE, 1., 2017, Piracicaba, SP. Proceedings... São Carlos, SP: Embrapa Pecuária Sudeste, 2017. p. 25. (Embrapa Pecuária Sudeste. Documentos, 125). Editores: Luiz Lehmann Coutinho, Luciana C. de A. Regitano, Gerson Barreto Mourão, Aline Silva Mello Cesar, Bárbara Silva Vignato, Mirele Daiana Poleti, Wellison Jarles da Silva Diniz.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 44. | | ROCHA, M. I. P.; SOUZA, M. M. de; ZERLOTINI NETO, A.; TIZIOTO, P. C.; OLIVEIRA, P. S. N. de; LIMA, A. O. de; AFONSO, J.; DINIZ, W. J. da S.; BUSS, C. E.; COUTINHO, L. L.; REGITANO, L. C. de A.; NICIURA, S. C. M. LDHB gene has allele-specific expression in liver of Nelore cattle extremes for feed efficiency. In: WORKSHOP ON OMICS STRATEGIES APPLIED TO LIVESTOCK SCIENCE, 1., 2017, Piracicaba, SP. Proceedings... São Carlos, SP: Embrapa Pecuária Sudeste, 2017. p. 25. (Embrapa Pecuária Sudeste. Documentos, 125) Editores: Luiz Lehmann Coutinho, ESALQ/USP; Luciana Correia de Almeida Regitano, Embrapa Pecuária Sudeste; Gerson Barreto Mourão, ESALQ/USP; Aline Silva Mello Cesar, ESALQ/USP; Bárbara Silva Vignato, FZEA/USP; Mirele Daiana Poleti,...| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 45. | | OLIVEIRA, P. S. N. de; COUTINHO, L. L.; TIZIOTO, P. C.; CESAR, A. S. M.; OLIVEIRA, G. B. de; DINIZ, W, J. da S.; LIMA, A. O. de; REECY, J. M.; MOURÃO, G. B.; ZERLOTINI NETO, A.; REGITANO, L. C. de A. An integrative transcriptome analysis indicates regulatory mRNA-miRNA networks for residual feed intake in Nelore cattle. Scientific Reports, v. 8, p. 1-12, 2018. Article number: 17072. Na publicação: Adhemar Zerlotini, Luciana C. A. Regitano.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 46. | | OLIVEIRA, P. S. N. de; COUTINHO, L. L.; TIZIOTO, P. C.; CESAR, A. S. M.; OLIVEIRA, G. B. de; DINIZ, W, J. da S.; LIMA, A. O. de; REECY, J. M.; MOURÃO, G. B.; ZERLOTINI NETO, A.; REGITANO, L. C. de A. An integrative transcriptome analysis indicates regulatory mRNA-miRNA networks for residual feed intake in Nelore cattle. Scientific Reports, v. 8, n. 17072, 2018.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 47. | | SILVA, J. V. da; TIZIOTO, P. C.; OLIVEIRA, P. S. N. de; AFONSO, J.; DINIZ, W. J. da S.; LIMA, A. O. de; SOUZA, M. M. de; ROCHA, M. I. P.; BUSS, C. E.; COUTINHO, L. L.; REGITANO, L. C. de A. Genes diferencialmente expressos no músculo Longissimus dorsi de novilhos nelore divergentes para eficiência bruta. In: SILVA, W. T. L. da et al. (Ed.). Anais da 8ª Jornada Científica Embrapa São Carlos. Embrapa Instrumentação: Embrapa Pecuária Sudeste, 2016. p. 35. (Embrapa Instrumentação; Documentos, 61)| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 48. | | CESAR, A. S. M.; REGITANO, L. C. de A.; MOURÃO, G. B.; TULLIO, R. R.; LANNA, D. P. D.; NASSU, R. T.; MUDADU, M. de A.; OLIVEIRA, P. S. N.; NASCIMENTO, M. L. do; CHAVES, A. S.; ALENCAR, M. M. de; SONSTEGRAD, T. S.; GARRICK, D. J.; REECY, J. M.; COUTINHO, L. L. Genome-wide association study for intramuscular fat deposition and composition in Nellore cattle. BMC Genetics, v. 15, p. 39, 2014| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 49. | | SOUZA, M. M.; ZERLOTINI NETO, A.; NICIURA, S. C. M.; ROCHA, M. I. P.; DINIZ, W. J.; TIZIOTO, P. C.; OLIVEIRA, P. S. N.; LIMA, A. O.; AFONSO, J.; CESAR, A. S. M; COUTINHO, L. L.; REGITANO, L. C. de A. Genome-wide distribution of allele-specific expression in Nelore steers muscle. In: WORLD CONGRESS ON GENETICS APPLIED TO LIVESTOCK PRODUCTION, 11., 2018, Auckland. Proceedings... [S.l.: s.n.], 2018. 5 p. Na publicação: A. Zerlotini, L. C. A. Regitano. WCGALP 2018.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 50. | | SOUZA, M. M. de; ZERLOTINI NETO, A.; NICIURA, S. C. M.; ROCHA, M. I. P.; DINIZ, W. J.; TIZIOTO, P. C.; OLIVEIRA, P. S. N. de; LIMA, A. O.; AFONSO, J.; CESAR, A. S. M; COUTINHO, L. L.; REGITANO, L. C. de A. Genome-wide distribution of allele-specific expression in Nelore steers muscle. In: WORLD CONGRESS ON GENETICS APPLIED TO LIVESTOOCK PRODUCTION, 2018, Auckland, New Zealand. proceedings... Auckland, New Zealand: Massey University, 2018, v. 892.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 51. | | AFONSO, J.; TIZIOTO, P. C.; OLIVEIRA, P. S. N. de; DINIZ, W. J. da S.; LIMA, A. O. de; SOUZA, M. M. de; ROCHA, M. I. P.; SILVA, J. V. da; BUSS, C. E.; GROMBONI, C. F.; MOURAO, G. B.; NOGUEIRA, A. R. de A.; COUTINHO, L. L.; REGITANO, L. C. de A. Identification of genes associated with copper-deficient fatty acid increase in Nelore cattle. In: INTERNATIONAL SOCIETY FOR ANIMAL GENETICS CONFERENCE, 36., 2017, Dublin. Proceedings... Dublin: University College Dublin, 2017. p. 161.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 52. | | OLIVEIRA, P. S. N.; CESAR, A. S. M.; NASCIMENTO, M. L. do; CHAVES, A. S.; TIZIOTO, P. C.; TULLIO, R. R.; LANNA, D. P. D.; ROSA, A. do N.; SONSTEGARD, T. S.; MOURÃO, G. B.; REECY, J. M.; GARRICK, D. J.; MUDADU, M. de A.; COUTINHO, L. L.; REGITANO, L. C. de A. Identification of genomic regions associated with feed efficiency in Nelore cattle. BMC Genetics, v. 15, n. 1, 2014 10 p.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 53. | | CESAR, A. S. M.; REGITANO, L. C. de A.; REECY, J. M.; POLETI, M. D.; OLIVEIRA, P. S. N. de; OLIVEIRA, G. B. de; MOREIRA, G. C. M.; MUDADU, M. de A.; TIZIOTO, P. L.; KOLTES, J. E.; Fritz-Waters, E.; KRAMER, L.; GARRICK, D.; BEIKI, H.; GEISTLINGER, L.; MOURÃO, G. B.; ZERLOTINI NETO, A.; COUTINHO, L. L. Identification of putative regulatory regions and transcription factors associated with intramuscular fat content traits. BMC Genomics, v. 19, p. 1-20, 2018. Article number: 499. Na publicação: Luciana C. A. Regitano, Maurício A. Mudadu, Adhemar Zerlotini.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 54. | | TIZIOTO, P.; COUTINHO, L. L.; DECKER, J. E.; SCHNABEL, R. D.; ROSA, C. O.; OLIVEIRA, P. S. N.; SOUZA, M. M.; MOURÃO, G. B.; TULLIO, R. R.; CHAVES, A. S.; LANNA, D. P. D.; ZERLOTINI NETO, A.; MUDADU, M. A.; TAYLOR, J. F.; REGITANO, L. C. A. Global liver gene expression differences in Nelore steers with divergent residual feed intake phenotypes. BMC Genomics, London, v. 16, p. 1-14, 2015.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 55. | | TIZIOTO, P.; COUTINHO, L. L.; DECKER, J. E.; SCHNABEL, R. D.; ROSA, K. O.; OLIVEIRA, P. S. N.; SOUZA, M. M.; MOURÃO, G. B.; TULLIO, R. R.; CHAVES, A. S.; LANNA, D. P. D.; ZERLOTINI NETO, A.; MUDADU, M. de A.; TAYLOR, J. F.; REGITANO, L. C. de A. Global liver gene expression differences in Nelore steers with divergent residual feed intake phenotypes. BMC Genomics, v. 16, n. 242, 2015.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 56. | | TIZIOTO, P. L.; COUTINHO, L. L.; OLIVEIRA, P. S. N.; CESAR, A. S. M.; DINIZ, W. J. S.; LIMA, A. O.; ROCHA, M. I.; DECKER, J. E.; SCHNABEL, R. D.; MOURÃO, G. B.; TULLIO, R. R.; ZERLOTINI NETO, A.; TAYLOR, J. F.; REGITANO, L. C. de A. Gene expression differences in Longissimus muscle of Nelore steers genetically divergent for residual feed intake. Scientific Reports, v. 6, p. 1-12, 2016.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 57. | | BUSS, C. E.; AFONSO, J.; OLIVEIRA, P. S. N. DE; PETRINI, J.; TIZIOTO, P. C.; CESAR, A. S. M.; GUSTANI-BUSS, E. C.; CARDOSO, T. F.; ROVADOSKI, G. A.; DINIZ, W. J. DA S.; LIMA, A. O. DE; ROCHA, M. I. P.; ANDRADE, B. G. N.; WOLF, J. B.; COUTINHO, L. L.; MOURÃO, G. B.; REGITANO, L. C. de A. Bivariate GWAS reveals pleiotropic regions among feed efficiency and beef quality-related traits in Nelore cattle. Mammalian Genome, v. 34, p. 90-103, dec. 2022.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 58. | | SOUZA, M. M. de; NICIURA, S. C. M.; IBELLI, A. M. G.; MEIRELLES, S. L.; ROCHA, M. I.; TIZIOTO, P. C.; GASPARIN, G.; CARVALHO, M. E.; VENERONI, G.; OLIVEIRA, P. S. N.; SIQUEIRA, F.; COUTINHO, L. L.; REGITANO, L. C. de A. Bialellic expression studies of CAST gene in bovine muscle. Journal Animal Science, v. 89, (E-Suppl. 1); Journal of Dairy Science, v. 89 (E-Suppl. 1), p.277, 2011| Biblioteca(s): Embrapa Gado de Corte; Embrapa Pecuária Sudeste. |
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| 59. | | OLIVEIRA, P. S. N. de; COUTINHO, L. L.; CESAR, A. S. M.; DINIZ, W. J. da S.; SOUZA, M. de S.; ANDRADE, B. G.; KOLTES, J. E.; MOURÃO, G. B.; ZERLOTINI NETO, A.; REECY, J. M.; REGITANO, L. C. de A. Co-expression networks reveal potential regulatory roles of miRNAs in fatty acid composition of nelore cattle. Frontiers in Genetics, v. 10, p. 1-14, July 2019. Article 651. Na publicação: Adhemar Zerlotini, Luciana C.A. Regitano.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 60. | | CARDOSO, T. F.; BRUSCADIN, J. J.; AFONSO, J.; PETRINI, J.; ANDRADE, B. G. N.; OLIVEIRA, P. S. N. de; MALHEIROS, J. M.; ROCHA, M. I. P.; ZERLOTINI NETO, A.; FERRAZ, J. B. S.; MOURÃO, G. B.; COUTINHO, L. L.; REGITANO, L. C. de A. EEF1A1 transcription cofactor gene polymorphism is associated with muscle gene expression and residual feed intake in Nelore cattle. Mammalian Genome, v. 33, n. 4, p. 619-628, Dec. 2022.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| Registros recuperados : 74 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Agricultura Digital. |
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Data corrente: |
21/01/2016 |
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Data da última atualização: |
22/06/2016 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
TIZIOTO, P.; COUTINHO, L. L.; DECKER, J. E.; SCHNABEL, R. D.; ROSA, C. O.; OLIVEIRA, P. S. N.; SOUZA, M. M.; MOURÃO, G. B.; TULLIO, R. R.; CHAVES, A. S.; LANNA, D. P. D.; ZERLOTINI NETO, A.; MUDADU, M. A.; TAYLOR, J. F.; REGITANO, L. C. A. |
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Afiliação: |
POLYANA TIZIOTO, CPPSE, University of Missouri Columbia; LUIZ L. COUTINHO, Esalq/USP; JARED E. DECKER, University of Missouri Columbia; ROBERT D. SCHNABEL, University of Missouri Columbia; KAMILA O. ROSA, Unesp Jaboticabal; PRISCILA S. N. OLIVEIRA, UFSCar; MARCELA M. SOUZA, UFSCar; GERSON B. MOURÃO, Esalq/USP; RYMER RAMIZ TULLIO, CPPSE; AMÁLIA S. CHAVES, Esalq/USP; DANTE P. D. LANNA, Esalq/USP; ADHEMAR ZERLOTINI NETO, CNPTIA; MAURICIO DE ALVARENGA MUDADU, CPPSE; JEREMY F. TAYLOR, University of Missouri Columbia; LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE. |
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Título: |
Global liver gene expression differences in Nelore steers with divergent residual feed intake phenotypes. |
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Ano de publicação: |
2015 |
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Fonte/Imprenta: |
BMC Genomics, London, v. 16, p. 1-14, 2015. |
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DOI: |
DOI 10.1186/s12864-015-1464-x |
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Idioma: |
Inglês |
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Conteúdo: |
Background: Efficiency of feed utilization is important for animal production because it can reduce greenhouse gas emissions and improve industry profitability. However, the genetic basis of feed utilization in livestock remains poorly understood. Recent developments in molecular genetics, such as platforms for genome-wide genotyping and sequencing, provide an opportunity to identify genes and pathways that influence production traits. It is known that transcriptional networks influence feed efficiency-related traits such as growth and energy balance. This study sought to identify differentially expressed genes in animals genetically divergent for Residual Feed Intake (RFI), using RNA sequencing methodology (RNA-seq) to obtain information from genome-wide expression profiles in the liver tissues of Nelore cattle. Results: Differential gene expression analysis between high Residual Feed Intake (HRFI, inefficient) and low Residual Feed Intake (LRFI, efficient) groups was performed to provide insights into the molecular mechanisms that underlie feed efficiency-related traits in beef cattle. A total of 112 annotated genes were identified as being differentially expressed between animals with divergent RFI phenotypes. These genes are involved in ion transport and metal ion binding; act as membrane or transmembrane proteins; and belong to gene clusters that are likely related to the transport and catalysis of molecules through the cell membrane and essential mechanisms of nutrient absorption. Genes with functions in cellular signaling, growth and proliferation, cell death and survival were also differentially expressed. Among the over-represented pathways were drug or xenobiotic metabolism, complement and coagulation cascades, NRF2-mediated oxidative stress, melatonin degradation and glutathione metabolism. Conclusions: Our data provide new insights and perspectives on the genetic basis of feed efficiency in cattle. Some previously identified mechanisms were supported and new pathways controlling feed efficiency in Nelore cattle were discovered. We potentially identified genes and pathways that play key roles in hepatic metabolic adaptations to oxidative stress such as those involved in antioxidant mechanisms. These results improve our understanding of the metabolic mechanisms underlying feed efficiency in beef cattle and will help develop strategies for selection towards the desired phenotype. MenosBackground: Efficiency of feed utilization is important for animal production because it can reduce greenhouse gas emissions and improve industry profitability. However, the genetic basis of feed utilization in livestock remains poorly understood. Recent developments in molecular genetics, such as platforms for genome-wide genotyping and sequencing, provide an opportunity to identify genes and pathways that influence production traits. It is known that transcriptional networks influence feed efficiency-related traits such as growth and energy balance. This study sought to identify differentially expressed genes in animals genetically divergent for Residual Feed Intake (RFI), using RNA sequencing methodology (RNA-seq) to obtain information from genome-wide expression profiles in the liver tissues of Nelore cattle. Results: Differential gene expression analysis between high Residual Feed Intake (HRFI, inefficient) and low Residual Feed Intake (LRFI, efficient) groups was performed to provide insights into the molecular mechanisms that underlie feed efficiency-related traits in beef cattle. A total of 112 annotated genes were identified as being differentially expressed between animals with divergent RFI phenotypes. These genes are involved in ion transport and metal ion binding; act as membrane or transmembrane proteins; and belong to gene clusters that are likely related to the transport and catalysis of molecules through the cell membrane and essential mechanisms of nutrient... Mostrar Tudo |
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Palavras-Chave: |
Bioinformática; Feed efficiency; RFI; Sequenciamento genético; Transcriptoma. |
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Thesagro: |
Bos Indicus. |
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Thesaurus NAL: |
Bioinformatics; Feed conversion; Transcriptomics; Zebu. |
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Categoria do assunto: |
X Pesquisa, Tecnologia e Engenharia |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/138317/1/Global-liver-Tizioto.pdf
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Marc: |
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024 7 $aDOI 10.1186/s12864-015-1464-x$2DOI
100 1 $aTIZIOTO, P.
245 $aGlobal liver gene expression differences in Nelore steers with divergent residual feed intake phenotypes.$h[electronic resource]
260 $c2015
520 $aBackground: Efficiency of feed utilization is important for animal production because it can reduce greenhouse gas emissions and improve industry profitability. However, the genetic basis of feed utilization in livestock remains poorly understood. Recent developments in molecular genetics, such as platforms for genome-wide genotyping and sequencing, provide an opportunity to identify genes and pathways that influence production traits. It is known that transcriptional networks influence feed efficiency-related traits such as growth and energy balance. This study sought to identify differentially expressed genes in animals genetically divergent for Residual Feed Intake (RFI), using RNA sequencing methodology (RNA-seq) to obtain information from genome-wide expression profiles in the liver tissues of Nelore cattle. Results: Differential gene expression analysis between high Residual Feed Intake (HRFI, inefficient) and low Residual Feed Intake (LRFI, efficient) groups was performed to provide insights into the molecular mechanisms that underlie feed efficiency-related traits in beef cattle. A total of 112 annotated genes were identified as being differentially expressed between animals with divergent RFI phenotypes. These genes are involved in ion transport and metal ion binding; act as membrane or transmembrane proteins; and belong to gene clusters that are likely related to the transport and catalysis of molecules through the cell membrane and essential mechanisms of nutrient absorption. Genes with functions in cellular signaling, growth and proliferation, cell death and survival were also differentially expressed. Among the over-represented pathways were drug or xenobiotic metabolism, complement and coagulation cascades, NRF2-mediated oxidative stress, melatonin degradation and glutathione metabolism. Conclusions: Our data provide new insights and perspectives on the genetic basis of feed efficiency in cattle. Some previously identified mechanisms were supported and new pathways controlling feed efficiency in Nelore cattle were discovered. We potentially identified genes and pathways that play key roles in hepatic metabolic adaptations to oxidative stress such as those involved in antioxidant mechanisms. These results improve our understanding of the metabolic mechanisms underlying feed efficiency in beef cattle and will help develop strategies for selection towards the desired phenotype.
650 $aBioinformatics
650 $aFeed conversion
650 $aTranscriptomics
650 $aZebu
650 $aBos Indicus
653 $aBioinformática
653 $aFeed efficiency
653 $aRFI
653 $aSequenciamento genético
653 $aTranscriptoma
700 1 $aCOUTINHO, L. L.
700 1 $aDECKER, J. E.
700 1 $aSCHNABEL, R. D.
700 1 $aROSA, C. O.
700 1 $aOLIVEIRA, P. S. N.
700 1 $aSOUZA, M. M.
700 1 $aMOURÃO, G. B.
700 1 $aTULLIO, R. R.
700 1 $aCHAVES, A. S.
700 1 $aLANNA, D. P. D.
700 1 $aZERLOTINI NETO, A.
700 1 $aMUDADU, M. A.
700 1 $aTAYLOR, J. F.
700 1 $aREGITANO, L. C. A.
773 $tBMC Genomics, London$gv. 16, p. 1-14, 2015.
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Embrapa Agricultura Digital (CNPTIA) |
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