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| Registros recuperados : 108 | |
| 81. |  | MOKRY, F. B.; HIGA, R. H.; MUDADU, M. de A.; LIMA, A. O. de; MEIRELLES, S. L. C.; SILVA, M. V. G. B. da; CARDOSO, F. F.; OLIVEIRA, M. M. de; URBINATI, I.; NICIURA, S. C. M.; TULLIO, R. R.; ALENCAR, M. M. de; REGITANO, L. C. de A. Genome-wide association study for backfat thickness in Canchim beef cattle using Random Forest approach. BMC Genetics, London v. 14, n. 47, 2013. 11 p.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste; Embrapa Pecuária Sul. |
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| 82. | | CESAR, A. S. M.; REGITANO, L. C. de A.; MOURÃO, G. B.; TULLIO, R. R.; LANNA, D. P. D.; NASSU, R. T.; MUDADU, M. de A.; OLIVEIRA, P. S. N.; NASCIMENTO, M. L. do; CHAVES, A. S.; ALENCAR, M. M. de; SONSTEGRAD, T. S.; GARRICK, D. J.; REECY, J. M.; COUTINHO, L. L. Genome-wide association study for intramuscular fat deposition and composition in Nellore cattle. BMC Genetics, v. 15, p. 39, 2014| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 83. | | TIZIOTO, P.; DECKER, J.; TAYLOR, J.; SCHNABEL, R.; MUDADU, M. de A.; COUTINHO, L. L.; MOURÃO, G. B.; SONSTEGARD, T.; ROSA, A. do N.; ALENCAR, M. M. de; TULLIO, R. R.; MEDEIROS, S. R.; NASSU, R. T.; FEIJO, G. L. D.; SIQUEIRA, F.; REGITANO, L. C. de A. A Genome-Wide Association Study of Meat Tenderness in Nelore Beef Cattle. In: PLANT ANIMAL GENOME CONFERENCE 21, 2013, San-Diego. abstract...San Diego: INTLPAG, 2013. P0573| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 84. | | SOMAVILLA, A. L.; SONSTEGARD, T. S.; HIGA, R. H.; ROSA, A. do N.; SIQUEIRA, F.; SILVA, L. O. C. da; TORRES JUNIOR, R. A. de A.; COUTINHO, L. L.; MUDADU, M. de A.; ALENCAR, M. M. de; REGITANO, L. C. de A. A genome-wide scan for selection signatures in Nellore cattle. Animal Genetics, v. 45, n. 6, p. 771-781, dec. 2014| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 85. | | TIZIOTO, P.; COUTINHO, L. L.; DECKER, J. E.; SCHNABEL, R. D.; ROSA, K. O.; OLIVEIRA, P. S. N.; SOUZA, M. M.; MOURÃO, G. B.; TULLIO, R. R.; CHAVES, A. S.; LANNA, D. P. D.; ZERLOTINI NETO, A.; MUDADU, M. de A.; TAYLOR, J. F.; REGITANO, L. C. de A. Global liver gene expression differences in Nelore steers with divergent residual feed intake phenotypes. BMC Genomics, v. 16, n. 242, 2015.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 86. | | OLIVEIRA, P. S. N.; CESAR, A. S. M.; NASCIMENTO, M. L. do; CHAVES, A. S.; TIZIOTO, P. C.; TULLIO, R. R.; LANNA, D. P. D.; ROSA, A. do N.; SONSTEGARD, T. S.; MOURÃO, G. B.; REECY, J. M.; GARRICK, D. J.; MUDADU, M. de A.; COUTINHO, L. L.; REGITANO, L. C. de A. Identification of genomic regions associated with feed efficiency in Nelore cattle. BMC Genetics, v. 15, n. 1, 2014 10 p.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 87. | | TIZIOTO, P. C.; GASPARIN, G.; SOUZA, M. M.; MUDADU, M. de A.; COUTINHO, L. L.; MOURÃO, G. B.; THOLON, P.; MEIRELLES, S. L. C.; TULLIO, R. R.; ROSA, A. do N.; ALENCAR, M. M. de; MEDEIROS, S. R. de; SIQUEIRA, F.; FEIJO, G. L. D.; NASSU, R. T.; REGITANO, L. C. de A. Identification of KCNJ11 as a functional candidate gene for bovine meat tenderness. Physiological Genomics, v. 45, n. 24, p. 1215-1221, October 2013.| Biblioteca(s): Embrapa Gado de Corte. |
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| 88. | | TIZIOTO, P.; GASPARINI, G.; SOUZA, M. M.; MUDADU, M. de A.; COUTINHO, L. L.; MOURÃO, G. B.; THOLON, P.; MEIRELLES, S. L. C.; TULLIO, R. R.; ROSA, A. do N.; ALENCAR, M. M. de; MEDEIROS, S. R.; SIQUEIRA, F.; FEIJO, G. L. D.; NASSU, R. T.; REGITANO, L. C. de A. Identification of KCNJ11 as a functional candidate gene for bovine meat tenderness. Physiological Genomics, v. 45, n. 24, p. 1215-1221, 2013.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 89. | | CESAR, A. S. M.; REGITANO, L. C. de A.; REECY, J. M.; POLETI, M. D.; OLIVEIRA, P. S. N. de; OLIVEIRA, G. B. de; MOREIRA, G. C. M.; MUDADU, M. de A.; TIZIOTO, P. L.; KOLTES, J. E.; Fritz-Waters, E.; KRAMER, L.; GARRICK, D.; BEIKI, H.; GEISTLINGER, L.; MOURÃO, G. B.; ZERLOTINI NETO, A.; COUTINHO, L. L. Identification of putative regulatory regions and transcription factors associated with intramuscular fat content traits. BMC Genomics, v. 19, p. 1-20, 2018. Article number: 499. Na publicação: Luciana C. A. Regitano, Maurício A. Mudadu, Adhemar Zerlotini.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 90. | | SOUZA, M. M. de; NICIURA, S. C. M.; TIZIOTO, P. C.; IBELLI, A. M. G.; GASPARIN, G.; ROCHA, M. I. P.; DONATONI, F. A. B.; MALAGO JUNIOR, W.; DINIZ, W. J. S.; OLIVEIRA, P. S. N. de; LIMA, A. O.; MUDADU, M. de A.; BARIONI JUNIOR, W.; COUTINHO, L. L.; REGITANO, L. C. de A. Allele- and parent-of-origin-specific effects on expression of the KCNJ11 gene: a candidate for meat tenderness in cattle. Genetics and Molecular Research, v.15, n.3, aug. 2016. 15| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 91. | | SOUZA, M. M. de; ZERLOTINI NETO, A.; ROCHA, M. I. P.; BRUSCADIN, J. J.; DINIZ, W. J. da S.; CARDOSO, T. F.; CESAR, A. S. M.; AFONSO, J.; ANDRADE, B. G. N.; MUDADU, M. de A.; MOKRY, F. B.; TIZIOTO, P. C.; OLIVEIRA, P. S. N. de; NICIURA, S. C. M.; COUTINHO, L. L.; REGITANO, L. C. de A. Allele-specific expression is widespread in Bos indicus muscle and affects meat quality candidate genes. Scientific Reports, v. 10, n. 1, p. 1-11, 2020. Na publicação: Adhemar Zerlotini. Article number: 10204.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 92. | | LIMA, A. O. de; OLIVEIRA, P. S. N. de; TIZIOTO, P. C.; AFONSO, J.; SOMAVILLA, A. L.; DINIZ, W. J. da S.; SILVA, J. V. da; ROCHA, M. I. P.; MUDADU, M. de A.; COUTINHO, L. L.; REGITANO, L. C. de A. Association analyses pointed the TIPARP as a potential candidate gene influencing residual feed intake variation in Nelore cattle. INTERNATIONAL MEETING OF ADVANCES IN ANIMAL SCIENCE, 1., 2016, Jaboticabal. Resumos... Jaboticabal: PPGZ Unesp, 2016. ref. 45135.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 93. | | TIZIOTO, P. C.; SOUZA, M. M. de; MUDADU, M. de A.; THOLON, P.; MEIRELLES, S. L. C.; TULLIO, R. R.; NASSU, R. T.; ROSA, A. do N.; MEDEIROS, S. R. de; SIQUEIRA, F.; FEIJO, G. L. D.; REGITANO, L. C. de A. Association of KCNJ11 gene variants with tenderness in Nelore breed. In: CONFERENCE OF INTERNATIONAL SOCIETY FOR ANIMAL GENETICS, 33., 2012, Cairns, AU. Abstracts... Cairns: ISAG, 2012. p.109-110 P4046| Biblioteca(s): Embrapa Gado de Corte; Embrapa Pecuária Sudeste. |
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| 94. | | SOUZA, M. M.; ZERLOTINI NETO, A.; TIZIOTO, P. C.; OLIVEIRA, P. S. N.; SOMAVILLA, A. L.; MOKRY, F. B.; CESAR, A. S. M.; DINIZ, W. J. S.; MUDADU, M. de A.; NICIURA, S. C. M.; COUTINHO, L. L.; REGITANO, L. C. de A. Monoallelic expression of NNAT gene in Nelore steers skeletal muscle. In:WORLD CONGRESS OF GENETICS APPLIED TO LIVESTOK PRODUCTION, 10; . 2014, Vancouver. Proceedings... Vancouver: American Society of animal Science, 2014| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 95. | | TIZIOTO, P. C.; TAYLOR, J. F.; DECKER, J. E.; GROMBONI, C. F.; MUDADU, M. de A.; SCHNABEL, R. D.; COUTINHO, L. L.; MOURÃO, G. B.; NASSU, R. T.; DONATONI, F. A. B.; THOLON, P.; SONSTEGARD, T. S.; ALENCAR, M. M. de; TULLIO, R. R.; REECY, J. M.; NOGUEIRA, A. R. de A.; REGITANO, L. C. de A. Effects of quantitative trait loci on iron content of bovine longissimus dorsi muscle. In: WORLD CONGRESS OF GENETICS APPLIED TO LIVESTOK PRODUCTION, 10., 2014, Vancouver. Proceedings... Vancouver: American Society of Animal Science, 2014. 3 p.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 96. | | BUZANSKAS, M. E.; VENTURA, R. V.; CHUD, T. C. S.; BERNARDES, P. A.; SANTOS, D. J. de A.; REGITANO, L. C. de A.; ALENCAR, M. M. de; MUDADU, M. de A.; ZANELLA, R.; SILVA, M. V. G. B.; LI, C.; SCHENKE, F. S.; MUNARI, D. P. Study on the introgression of beef breeds in canchim cattle using single nucleotide polymorphism markers. Plos one, v. 12, p. 1-16, 2017.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Gado de Leite; Embrapa Pecuária Sudeste. |
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| 97. | | CHUD, T. C. S.; VENTURA, R. V.; SCHENKEL, F. S.; CARVALHEIRO, R.; BUZANSKAS, M. E.; ROSA, J. O.; MUDADU, M. de A.; SILVA, M. V. G. B.; MOKRY, F. B.; MARCONDES, C. R.; REGITANO, L. C. de A.; MUNARI, D. P. Strategies for genotype imputation in composite beef cattle. BMC Genomics, v. 16, n. 99, 2015. 10 p.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 98. | | BUZANSKAS, M. E.; GROSSI, D. do A.; VENTURA, R. V.; SCHENKEL, F. S.; CHUD, T. C. S.; STAFUZZA, N. B.; ROLA, L. D.; MEIRELLES, S. L. C.; MOKRY, F. B.; MUDADU, M. de A.; HIGA, R. H.; SILVA, M. V. G. B.; ALENCAR, M. M. de; REGITANO, L. C. de A.; MUNARI, D. P. Candidate genes for male and female reproductive traits in Canchim beef cattle. Journal of Animal Science and Biotechnology, v. 8, p. 1-10, 2017. Artigo 67. Na publicação: Marcos Vinícius Gualberto Barbosa da Silva.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Gado de Leite; Embrapa Pecuária Sudeste. |
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| 99. | | MOKRY, F. B.; BUZANSKAS, M. E.; MUDADU, M. de A.; GROSSI, D. do A.; HIGA, R. H.; VENTURA, R. V.; LIMA, A. O. de; SARGOLZAEI, M.; MEIRELLES, S. L. C.; SCHENKEL, F. S.; SILVA, M. V. G. B.; NICIURA, S. C. M.; ALENCAR, M. M. de; MINARI, D. P.; REGITANO, L. C. de A. Linkage disequilibrium and haplotype block structure in a composite beef cattle breed. BMC Genomics, London v. 15, S6, p. 1-9, 2014. Suppl 7.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Gado de Leite; Embrapa Pecuária Sudeste. |
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| 100. | | OLIVEIRA, P. S. N.; CESAR, A. S. M.; NASCIMENTO, M. L. do; SOUZA, M. M.; TULLIO, R. R.; LANNA, D. P.; SONSTEGARD, T.; MOURÃO, G. B.; REECY, J. M.; GARRICK, D. J.; MUDADU, M. de A.; REGITANO, L. C. de A.; COUTINHO, L. L. Positional candidate genes for residual intake and gain in Nelore beef cattle. In:WORLD CONGRESS OF GENETICS APPLIED TO LIVESTOK PRODUCTION, 10; . 2014, Vancouver. Proceedings... Vancouver: American Society of animal Science, 2014| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| Registros recuperados : 108 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Agricultura Digital; Embrapa Gado de Leite; Embrapa Pecuária Sudeste. |
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Data corrente: |
17/12/2014 |
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Data da última atualização: |
05/02/2024 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
MOKRY, F. B.; BUZANSKAS, M. E.; MUDADU, M. de A.; GROSSI, D. do A.; HIGA, R. H.; VENTURA, R. V.; LIMA, A. O. de; SARGOLZAEI, M.; MEIRELLES, S. L. C.; SCHENKEL, F. S.; SILVA, M. V. G. B.; NICIURA, S. C. M.; ALENCAR, M. M. de; MINARI, D. P.; REGITANO, L. C. de A. |
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Afiliação: |
MARCOS VINICIUS GUALBERTO B SILVA, CNPGL. |
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Título: |
Linkage disequilibrium and haplotype block structure in a composite beef cattle breed. |
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Ano de publicação: |
2014 |
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Fonte/Imprenta: |
BMC Genomics, London v. 15, S6, p. 1-9, 2014. |
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DOI: |
10.1186/1471-2164-15-S7-S6 |
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Idioma: |
Inglês |
|
Notas: |
Suppl 7. |
|
Conteúdo: |
Abstract. Background: The development of linkage disequilibrium (LD) maps and the characterization of haplotype block structure at the population level are useful parameters for guiding genome wide association (GWA) studies, and for understanding the nature of non-linear association between phenotypes and genes. The elucidation of haplotype block structure can reduce the information of several single nucleotide polymorphisms (SNP) into the information of a haplotype block, reducing the number of SNPs in a coherent way for consideration in GWA and genomic selection studies. Results: The maximum average LD, measured by r2 varied between 0.33 to 0.40 at a distance of < 2.5 kb, and the minimum average values of r2 varied between 0.05 to 0.07 at distances ranging from 400 to 500 kb, clearly showing that the average r2 reduced with the increase in SNP pair distances. The persistence of LD phase showed higher values at shorter genomic distances, decreasing with the increase in physical distance, varying from 0.96 at a distance of < 2.5 kb to 0.66 at a distance from 400 to 500 kb. A total of 78% of all SNPs were clustered into haplotype blocks, covering 1,57 Mb of the total autosomal genome size. Conclusions: This study presented the first high density linkage disequilibrium map and haplotype block structure for a composite beef cattle population, and indicates that the high density SNP panel over 700 k can be used for genomic selection implementation and GWA studies for Canchim beef cattle. MenosAbstract. Background: The development of linkage disequilibrium (LD) maps and the characterization of haplotype block structure at the population level are useful parameters for guiding genome wide association (GWA) studies, and for understanding the nature of non-linear association between phenotypes and genes. The elucidation of haplotype block structure can reduce the information of several single nucleotide polymorphisms (SNP) into the information of a haplotype block, reducing the number of SNPs in a coherent way for consideration in GWA and genomic selection studies. Results: The maximum average LD, measured by r2 varied between 0.33 to 0.40 at a distance of < 2.5 kb, and the minimum average values of r2 varied between 0.05 to 0.07 at distances ranging from 400 to 500 kb, clearly showing that the average r2 reduced with the increase in SNP pair distances. The persistence of LD phase showed higher values at shorter genomic distances, decreasing with the increase in physical distance, varying from 0.96 at a distance of < 2.5 kb to 0.66 at a distance from 400 to 500 kb. A total of 78% of all SNPs were clustered into haplotype blocks, covering 1,57 Mb of the total autosomal genome size. Conclusions: This study presented the first high density linkage disequilibrium map and haplotype block structure for a composite beef cattle population, and indicates that the high density SNP panel over 700 k can be used for genomic selection implementation and GWA studies for Canchim bee... Mostrar Tudo |
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Palavras-Chave: |
Composite; Desequilíbrio de ligação; Genome wide association studies; Halplotype block; Linjage disequilibirium; Polimorfismo de nucleotídeo único. |
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Thesagro: |
Gado de corte. |
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Thesaurus NAL: |
Beef cattle; Linkage disequilibrium; Single nucleotide polymorphism. |
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Categoria do assunto: |
G Melhoramento Genético |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/119863/1/MOKRY.pdf
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/114007/1/PROCI-2104.00140.pdf
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/114252/1/1471-2164-15-S7-S6.pdf
|
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Marc: |
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001 2006604
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008 2014 bl uuuu u00u1 u #d
024 7 $a10.1186/1471-2164-15-S7-S6$2DOI
100 1 $aMOKRY, F. B.
245 $aLinkage disequilibrium and haplotype block structure in a composite beef cattle breed.$h[electronic resource]
260 $c2014
500 $aSuppl 7.
520 $aAbstract. Background: The development of linkage disequilibrium (LD) maps and the characterization of haplotype block structure at the population level are useful parameters for guiding genome wide association (GWA) studies, and for understanding the nature of non-linear association between phenotypes and genes. The elucidation of haplotype block structure can reduce the information of several single nucleotide polymorphisms (SNP) into the information of a haplotype block, reducing the number of SNPs in a coherent way for consideration in GWA and genomic selection studies. Results: The maximum average LD, measured by r2 varied between 0.33 to 0.40 at a distance of < 2.5 kb, and the minimum average values of r2 varied between 0.05 to 0.07 at distances ranging from 400 to 500 kb, clearly showing that the average r2 reduced with the increase in SNP pair distances. The persistence of LD phase showed higher values at shorter genomic distances, decreasing with the increase in physical distance, varying from 0.96 at a distance of < 2.5 kb to 0.66 at a distance from 400 to 500 kb. A total of 78% of all SNPs were clustered into haplotype blocks, covering 1,57 Mb of the total autosomal genome size. Conclusions: This study presented the first high density linkage disequilibrium map and haplotype block structure for a composite beef cattle population, and indicates that the high density SNP panel over 700 k can be used for genomic selection implementation and GWA studies for Canchim beef cattle.
650 $aBeef cattle
650 $aLinkage disequilibrium
650 $aSingle nucleotide polymorphism
650 $aGado de corte
653 $aComposite
653 $aDesequilíbrio de ligação
653 $aGenome wide association studies
653 $aHalplotype block
653 $aLinjage disequilibirium
653 $aPolimorfismo de nucleotídeo único
700 1 $aBUZANSKAS, M. E.
700 1 $aMUDADU, M. de A.
700 1 $aGROSSI, D. do A.
700 1 $aHIGA, R. H.
700 1 $aVENTURA, R. V.
700 1 $aLIMA, A. O. de
700 1 $aSARGOLZAEI, M.
700 1 $aMEIRELLES, S. L. C.
700 1 $aSCHENKEL, F. S.
700 1 $aSILVA, M. V. G. B.
700 1 $aNICIURA, S. C. M.
700 1 $aALENCAR, M. M. de
700 1 $aMINARI, D. P.
700 1 $aREGITANO, L. C. de A.
773 $tBMC Genomics, London$gv. 15, S6, p. 1-9, 2014.
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Embrapa Gado de Leite (CNPGL) |
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