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| Registros recuperados : 98 | |
| 61. |  | OLIVEIRA, F. A. de; VIGNA, B. B. Z.; SILVA, C. C. da; FAVERO, A. P.; MATTA, F. de P.; AZEVEDO, A. L. S.; SOUZA, A. P. de. Coexpression and transcriptome analyses identify active apomixis-related genes in Paspalum notatum leaves. BMC Genomics, v. 21, n. 78, 2020. 15 p.| Biblioteca(s): Embrapa Gado de Leite; Embrapa Pecuária Sudeste. |
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| 62. | | MARCOS. M. F.; JANK, L.; MORI, I. K.; PEREIRA, E. dos S.; SOUZA, F. H. D. de; MATTA, F. de P. Estabelecimento de Acessos de Paspalum ssp. para gramados. In: INTERNATIONAL SYMPOSIUM ON FORAGE BREEDING, 3., 2011, Bonito, MS. Breeding forage for climate change adaptation and mitigation - eco-efficient animal produtction: proceedings. [Campo Grande, MS: Embrapa Gado de Corte], 2011. 195-198 1 CD-ROM| Biblioteca(s): Embrapa Gado de Corte. |
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| 63. | | MARCOS. M. F.; JANK, L.; MORI, I. K.; PEREIRA, E. dos S.; SOUZA, F. H. D. de; MATTA, F. de P. Estabelecimento de Acessos de Paspalum ssp. para gramados. In: INTERNATIONAL SYMPOSIUM ON FORAGE BREEDING, 3., 2011, Bonito, MS. Breeding forage for climate change adaptation and mitigation - eco-efficient animal produtction: proceedings. [Campo Grande, MS: Embrapa Gado de Corte], 2011. 195-198 1 CD-ROM| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 64. | | MAGRINI, V.; DIAS, M.; COSTA, A. C. da S.; SOUZA, G. B. de; MATTA, F. de P.; VIGNA, B. B. Z.; FAVERO, A. P. A espectroscopia de refletância no infravermelho próximo e a interação genótipo x ambiente. In: ENCONTRO LATINO AMERICANO DE INICIAÇÃO CIENTÍFICA, 17.; ENCONTRO LATINO AMERICANO DE PÓS GRADUAÇÃO, 13.; ENCONTRO LATINO AMERICANO DE INICIAÇÃO CIENTÍFICA JÚNIOR,7.; ENCONTRO DE INICIAÇÃO À DOCÊNCIA, 3., 2013., São José dos Campos. Anais... São José dos Campos: UNIVAP, 2013.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 65. | | VIGNA, B. B. Z.; MATTA, F. de P.; OLIVEIRA, F. A. de; SOUZA, A. P. de; FAVERO, A. P.; GUSMAO, M. R.; SOUZA, F. H. D. de. Caracterização morfológica e molecular de 20 acessos de Paspalum notatum com potencial de uso como gramados. In: CONGRESSO BRASILEIRO DE RECURSOS GENÉTICOS, 4., 2016, Curitiba, PR. Anais... Curitiba, PR: SBZ, 2016. p. 285.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 68. | | SANTOS, L. N. S. dos; ALVES, F. R.; BELAN, L. L.; CABRAL, P. D. S.; MATTA, F. de P.; JESUS JÚNIOR, W. C. de; MORAES, W. B. de. Damage quantification and reaction of bean genotypes (Phaseolus vulgaris L.) to Meloidogyne incognita race 3 and M. javanica. Summa Phytopathology, Botucatu, v. 38, n. 1, p. 24-29, mar. 2012.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 70. | | OLIVEIRA F. A. DE; AONO, A. H.; VIGNA, B. B. Z.; FAVERO, A. P.; MATTA, F. de P.; SOUZA, A. P. DE. Deciphering the molecular mechanisms of apomixis in polyploid Paspalum species with a SNP-based approach. In: BRAZILIAN CONGRESS OF GENETICS, 66.; SIMPÓSIO DE CITOGENÉTICA E GENÉTICAS DE PEIXES, 19.; REUNIÃO DE GENÉTICA DE MICRORGANISMOS, 32.; CONGRESSO LATINO-AMERICANO DE GENÉTICA PARA CONSERVAÇÃO, 2., 2021. [Abstracts]. Ribeirão Preto: Sociedade Brasileira de Genética, 2021. p. 463.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 71. | | MARCOS, M. F.; JANK, L.; MORI, I. K.; PEREIRA, E. DOS S.; SOUZA, F. H. D. de; MATTA, F. de P. Avaliação de acessos de Paspalum ssp. para estabelecimento de gramados. In: JORNADA CIENTÍFICA EMBRAPA GADO DE CORTE, 7., 2011, CAMPO GRANDE, MS. [Anais da]... Campo Grande, MS: Embrapa Gado de Corte, 2011.| Biblioteca(s): Embrapa Gado de Corte. |
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| 72. | | SOUZA, F. H. D. de; GUSMAO, M. R.; MATTA, F. de P.; CASTRO, A. C. R. de; MITTELMANN, A.; FAVERO, A. P.; JANK, L. Atributos desejáveis para gramados a serem cultivados sob condições brasileiras: uma proposta. Ornamental Horticulture, v. 22, n. 2, p. 154-165, 2016.| Biblioteca(s): Embrapa Agroindústria Tropical; Embrapa Gado de Corte; Embrapa Gado de Leite; Embrapa Pecuária Sudeste. |
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| 73. | | VIGNA, B. B. Z.; FAVERO, A. P.; OLIVEIRA, F. R. de; AZEVEDO, A. L. S.; RUSCITO, M. M.; GUSMAO, M. R.; MATTA, F. de P. Conteúdo de DNA, tamanho e número de estômatos de seis acessos de Paspalum Notatum Flüggé (Poaceae). In: CONGRESSO NACIONAL DE BOTÂNICA, 66., 2015, Santos. Botânica em transformação: livro de resumos. Brasília, DF: Sociedade Botânica do Brasil, 2015. p.805| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 74. | | COSTA, N. V. S.; GOMES, M. L. M.; SASSI, F.; CIOFFI, M. DE B.; MATTA, F. de P.; CAVALLARI, M. M.; FAVERO, A. P. Caracterização citogenética de genótipos de Paspalum L. promissores para o programa de melhoramento. In: Congresso Brasileiro de Recursos Genéticos, 7., 2022. Multifuncionalidade e Qualidade de Vida: anais. Brasília, DF: Sociedade Brasileira de Recursos Genéticos, 2022.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 77. | | TESK, C. R. M.; ABREU, J. G. de; PEREIRA, D. H.; SOLLENBERGER, L. E.; MATTA, F. de P.; PEDREIRA, B. C. e. Herbage accumulation, canopy characteristics, and nutritive value of tropical grasses in the Amazon biome. Crop Science, v. 60, n. 5, p. 2782-2791, 2020.| Biblioteca(s): Embrapa Agrossilvipastoril; Embrapa Pecuária Sudeste. |
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| 78. | | AMARAL, M. B.; RIBEIRO, T. G.; ALVES, G. C.; COELHO, M. R. R.; MATTA, F. de P.; BALDANI, J. I.; BALDANI, V. L. D. The occurrence of rhizobacteria from Paspalum genotypes and their effects on plant growth. Scientia Agricola, v. 79, n. 2, e20200240, 2022.| Biblioteca(s): Embrapa Agrobiologia; Embrapa Pecuária Sudeste. |
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| 79. | | CABRAL, P. D. S.; SOARES, T. C. B.; GONÇALVES, L. S. A.; AMARAL JUNIOR A. T. do; LIMA, A. B. P.; RODRIGUES, R.; MATTA, F. de P. Quantification of the diversity among common bean accessions using Ward-MLM strategy. Pesquisa Agropecuária Brasileira, Brasília, DF, v. 45, n. 10, p. 1124-1132, nov. 2010 Título em português: Quantificação da diversidade entre acessos de feijoeiro?comum com uso da estratégia Ward?MLM.| Biblioteca(s): Embrapa Unidades Centrais. |
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| 80. | | GUSMAO, M. R.; VALERIO, J. R.; MATTA, F. de P.; SOUZA, F. H. D. de; VIGNA, B. B. Z.; FAVERO, A. P.; BARIONI JUNIOR, W.; INÁCIO, G. R. Warm-Season (C4) Turfgrass Genotypes Resistant to Spittlebugs (Hemiptera: Cercopidae). Journal of Economic Entomology, v. 109, n. 4, p. 1914–1921, August 2016| Biblioteca(s): Embrapa Gado de Corte; Embrapa Pecuária Sudeste. |
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| Registros recuperados : 98 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Gado de Leite; Embrapa Pecuária Sudeste. |
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Data corrente: |
06/04/2020 |
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Data da última atualização: |
20/04/2020 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
OLIVEIRA, F. A. de; VIGNA, B. B. Z.; SILVA, C. C. da; FAVERO, A. P.; MATTA, F. de P.; AZEVEDO, A. L. S.; SOUZA, A. P. de. |
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Afiliação: |
Fernanda A. de Oliveira, UNICAMP; BIANCA BACCILI ZANOTTO VIGNA, CPPSE; Carla C. da Silva, UNICAMP; ALESSANDRA PEREIRA FAVERO, CPPSE; FREDERICO DE PINA MATTA, CPPSE; ANA LUISA SOUSA AZEVEDO, CNPGL; Anete P. de Souza, UNICAMP. |
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Título: |
Coexpression and transcriptome analyses identify active apomixis-related genes in Paspalum notatum leaves. |
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Ano de publicação: |
2020 |
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Fonte/Imprenta: |
BMC Genomics, v. 21, n. 78, 2020. |
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Páginas: |
15 p. |
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DOI: |
https://doi.org/10.1186/s12864-020-6518-z |
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Idioma: |
Inglês |
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Conteúdo: |
Background - Paspalum notatum exhibits both sexual and apomictic cytotypes and, thus, is considered a good model for studies of apomixis because it facilitates comparative approaches. In this work, transcriptome sequencing was used to compare contrasting P. notatum cytotypes to identify differential expression patterns and candidate genes involved in the regulation of expression of this trait. Results - We built a comprehensive transcriptome using leaf and inflorescence from apomictic tetraploids and sexual diploids/tetraploids and a coexpression network based on pairwise correlations between transcript expression profiles. We identified genes exclusively expressed in each cytotype and genes differentially expressed between pairs of cytotypes. Gene Ontology enrichment analyses were performed to better interpret the data. We de novo assembled 114,306 reference transcripts. In total, 536 candidate genes possibly associated with apomixis were detected through statistical analyses of the differential expression data, and several interacting genes potentially linked to the apomixis-controlling region, genes that have already been reported in the literature, and their neighbors were transcriptionally related in the coexpression network. Conclusions - Apomixis is a highly desirable trait in modern agriculture due to the maintenance of the characteristics of the mother plant in the progeny. The reference transcriptome, candidate genes and their coexpression network identified in this work represent rich resources for future grass breeding programs. MenosBackground - Paspalum notatum exhibits both sexual and apomictic cytotypes and, thus, is considered a good model for studies of apomixis because it facilitates comparative approaches. In this work, transcriptome sequencing was used to compare contrasting P. notatum cytotypes to identify differential expression patterns and candidate genes involved in the regulation of expression of this trait. Results - We built a comprehensive transcriptome using leaf and inflorescence from apomictic tetraploids and sexual diploids/tetraploids and a coexpression network based on pairwise correlations between transcript expression profiles. We identified genes exclusively expressed in each cytotype and genes differentially expressed between pairs of cytotypes. Gene Ontology enrichment analyses were performed to better interpret the data. We de novo assembled 114,306 reference transcripts. In total, 536 candidate genes possibly associated with apomixis were detected through statistical analyses of the differential expression data, and several interacting genes potentially linked to the apomixis-controlling region, genes that have already been reported in the literature, and their neighbors were transcriptionally related in the coexpression network. Conclusions - Apomixis is a highly desirable trait in modern agriculture due to the maintenance of the characteristics of the mother plant in the progeny. The reference transcriptome, candidate genes and their coexpression network identified in thi... Mostrar Tudo |
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Palavras-Chave: |
Differential expression; Gene coexpression network; RNA sequencing. |
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Thesaurus NAL: |
Apomixis; Paspalum. |
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Categoria do assunto: |
X Pesquisa, Tecnologia e Engenharia |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/212171/1/CoexpressionTranscriptomeAnalyses.pdf
https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1129868/1/Coexpression-and-transcriptome-analyses-identify-active-apomixis-related-genes-in-Paspalum.pdf
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Marc: |
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001 2121557
005 2020-04-20
008 2020 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.1186/s12864-020-6518-z$2DOI
100 1 $aOLIVEIRA, F. A. de
245 $aCoexpression and transcriptome analyses identify active apomixis-related genes in Paspalum notatum leaves.$h[electronic resource]
260 $c2020
300 $a15 p.
520 $aBackground - Paspalum notatum exhibits both sexual and apomictic cytotypes and, thus, is considered a good model for studies of apomixis because it facilitates comparative approaches. In this work, transcriptome sequencing was used to compare contrasting P. notatum cytotypes to identify differential expression patterns and candidate genes involved in the regulation of expression of this trait. Results - We built a comprehensive transcriptome using leaf and inflorescence from apomictic tetraploids and sexual diploids/tetraploids and a coexpression network based on pairwise correlations between transcript expression profiles. We identified genes exclusively expressed in each cytotype and genes differentially expressed between pairs of cytotypes. Gene Ontology enrichment analyses were performed to better interpret the data. We de novo assembled 114,306 reference transcripts. In total, 536 candidate genes possibly associated with apomixis were detected through statistical analyses of the differential expression data, and several interacting genes potentially linked to the apomixis-controlling region, genes that have already been reported in the literature, and their neighbors were transcriptionally related in the coexpression network. Conclusions - Apomixis is a highly desirable trait in modern agriculture due to the maintenance of the characteristics of the mother plant in the progeny. The reference transcriptome, candidate genes and their coexpression network identified in this work represent rich resources for future grass breeding programs.
650 $aApomixis
650 $aPaspalum
653 $aDifferential expression
653 $aGene coexpression network
653 $aRNA sequencing
700 1 $aVIGNA, B. B. Z.
700 1 $aSILVA, C. C. da
700 1 $aFAVERO, A. P.
700 1 $aMATTA, F. de P.
700 1 $aAZEVEDO, A. L. S.
700 1 $aSOUZA, A. P. de
773 $tBMC Genomics$gv. 21, n. 78, 2020.
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