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| Registros recuperados : 177 | |
| 101. |  | PINTO, M. de O.; BELICUAS, S. N. J.; MAGALHAES, J. V. de; PARRELLA, R. A. da C.; SCHAFFERT, R. E.; MENEZES, C. B. de. Identificação de marcadores moleculares microssatélites associados à restauração da fertilidade em sorgo. In: CONGRESSO NACIONAL DE MILHO E SORGO, 29., 2012, Águas de Lindóia. Diversidade e inovações na era dos transgênicos: resumos expandidos. Campinas: Instituto Agronômico; Sete Lagoas: Associação Brasileira de Milho e Sorgo, 2012. p. 53-59. 1 CD-ROM.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 102. | | ROCHA, D. D. D.; BERNARDINO, K. da C.; SILVA, L. F.; MOURA, L. M.; SOUZA, L. F. de; MAGALHAES, J. V. de; PASTINA, M. M.; SCHAFFERT, R. E. Identificação de QTLs associados ao teor de umidade e a cor de nervura em linhagens endogâmicas recombinantes em sorgo. In: CONGRESSO BRASILEIRO DE MELHORAMENTO DE PLANTAS, 8., 2015, Goiânia. O melhoramento de plantas, o futuro da agricultura e a soberania nacional: anais. Goiânia: UFG: SBMP, 2015.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 103. | | PINTO, M. de O.; ROCHA, D. D. D.; SILVA, L. F.; BERNARDINO, K. C.; PASTINA, M. M.; MAGALHAES, J. V. de; SCHAFFERT, R. E. Identification of QTLS associated with percentage of dry matter and midrib color in sorghum. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 6., 2017, Ouro Preto. Resumos... Ribeirão Preto: Sociedade Brasileira de Genética, 2017.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 104. | | MAGALHAES, J. V. de; ALVES, V. M. C.; NOVAIS, R. F.; MOSQUIM, P. R.; MAGALHAES, J. R.; BAHIA FILHO, A. F. C.; HUBER, D. M. Influence of phosphorus stress on Ammonium uptake by maize. Journal of Plant Nutrition, v.23, n.2, p.263-273, 2000. Produção científica/2000/CENARGEN.| Biblioteca(s): Embrapa Milho e Sorgo; Embrapa Recursos Genéticos e Biotecnologia. |
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| 105. | | APOLINÁRIO, L. da C.; PINTO, M. de O.; BARROS, B. de A.; GUIMARAES, L. J. M.; MAGALHAES, J. V. de; GUIMARÃES, C. T. Obtenção de linhagens-elites de milho introgredidas com o gene ZmMATE1 que confere tolerância ao alumínio. In: SEMINÁRIO DE INICIAÇÃO CIENTÍFICA PIBIC/CNPq, 13., 2018, Sete Lagoas. [Trabalhos apresentados]. Sete Lagoas: Embrapa Milho e Sorgo, 2018.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 106. | | TINOCO, C. F. da S.; MAGALHAES, J. V. de; LANA, U. G. de P.; BELICUAS, S. N. J.; PARENTONI, S. N.; GUIMARAES, L. J. M.; GUIMARAES, C. T. Obtenção de linhagens isogênicas para QTLs de tolerância ao alumínio em milho utilizando retrocruzamento assistido por marcadores. In: CONGRESSO NACIONAL DE MILHO E SORGO, 28.; SIMPÓSIO BRASILEIRO SOBRE A LAGARTA DO CARTUCHO, 4., 2010, Goiânia. Potencialidades, desafios e sustentabilidade: resumos expandidos... Sete Lagoas: ABMS, 2010. 1 CD-ROM.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 107. | | CAMPOS, L. J. M.; PRATES, H. T.; QUEIROZ, C. G. de S.; MAGALHAES, J. V. de; PITTA, G. V. E.; SCHAFFERT, R. E.; ALVES, V. M. C. Physiological assessment of the actual role of aluminum exclusion conferred by citrate release as an aluminum tolerance mechanism in maize. In: CONGRESSO NACIONAL DE MILHO E SORGO, 25.; SIMPOSIO BRASILEIRO SOBRE A LAGARTA-DO-CARTUCHO, SPODOPTERA FRUGIPERDA, 1., 2004, Cuiabá, MT. Da agricultura familiar ao agronegócio: tecnologia, competitividade e sustentabilidade: [resumos expandidos]. Sete Lagoas: ABMS: Embrapa Milho e Sorgo; Cuiabá: Empaer, 2004. 1 CD-ROM.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 108. | | SANTANA, P. A.; PINTO, M. de O.; SANTOS, C. V. dos; MENEZES, C. B. de; MAGALHAES, J. V. de; SCHAFFERT, R. E. Seleção assistida por marcadores moleculares para o desenvolvimento de sorgo sacarino tolerante ao alumínio. In: CONGRESSO NACIONAL DE MILHO E SORGO, 30.; SIMPÓSIO SOBRE LEPDÓPTEROS COMUNS A MILHO, SOJA E ALGODÃO, 1., 2014, Salvador. Eficiência nas cadeias produtivas e o abastecimento global: resumos expandidos. Sete Lagoas: Associação Brasileira de Milho e Sorgo, 2014. 1 CD-ROM.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 109. | | BARROS, V.; CHANDNANI, R.; SOUSA, S. M. de; MACIEL, L. S.; TOKIZAWA, M.; GUIMARÃES, C. T.; MAGALHAES, J. V. de; KOCHIAN, L. Root adaptation via common genetic factors conditioning tolerance to multiple stresses for crops cultivated on acidic tropical soils. Frontiers in Plant Science, v. 11, article 565339, 2020.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 110. | | PORTALUPPI, R.; BRAMMER, S. P.; MAGALHAES, J. V. de; COSTA, C. T. da; CAIERÃO, E.; NASCIMENTO JUNIOR, A. do; SILVA JUNIOR, J. P. da. Tolerância de genótipos de cereais de inverno ao alumínio em cultivo hidropônico e em campo. Pesquisa Agropecuária Brasileira, Brasília, DF, v. 45, n. 2, p. 178-185, fev. 2010.| Biblioteca(s): Embrapa Milho e Sorgo; Embrapa Trigo; Embrapa Unidades Centrais. |
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| 111. | | ALVES, V. M. C.; PITTA, G. V. E.; PARENTONI, S. N.; SCHAFFERT, R. E.; COELHO, A. M.; MAGALHAES, J. V. de. Toxidez por alumínio e hidrogênio no crescimento de raízes de milho. Revista Brasileira de Milho e Sorgo, Sete Lagoas, v. 3, n. 2, p. 311-318, 2004.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 112. | | PINTO, V. B.; FERREIRA, P. G.; VIDIGAL, P. M. P.; MENDES, T. A. de O.; DAL-BIANCO, M.; MAGALHAES, J. V. de; VIANA, J. M. S. Uncovering the transcriptional response of popcorn (Zea mays L. var. everta) under long-term aluminum toxicity. Scientific Reports, v. 11, 19644, 2021.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 113. | | MARON, L. G.; PIÑEROS, M. A.; GUIMARAES, C. T.; MAGALHAES, J. V. de; PLEIMAN, J. K.; MAO, C.; SHAFF, J.; BELICUAS, S. N. J; KOCHIAN, L. V. Two functionally distinct members of the MATE (multi-drug and toxic compound extrusion) family of transporters potentially underlie two major aluminum tolerance QTLs in maize. The Plant Journal, Oxford, v. 61, n. 5, p. 728-740, 2010.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 114. | | CARNEIRO, A. A.; BRANDÃO, R. L.; COELHO, G. T. P. C.; SCHAFFERT, R. E.; MAGALHAES, J. V. de; SILVA, L. R.; CARNEIRO, N. P. Transformação genética de sorgo com gene de tolerância ao alumínio ALMT1 isolado de trigo. In: CONGRESSO NACIONAL DE MILHO E SORGO, 27.; SIMPOSIO BRASILEIRO SOBRE A LAGARTA-DO-CARTUCHO, SPODOPTERA FRUGIPERDA, 3.; WORKSHOP SOBRE MANEJO E ETIOLOGIA DA MANCHA BRANCA DO MILHO, 2008, Londrina. Agroenergia, produção de alimentos e mudanças climáticas: desafios para milho e sorgo: trabalhos e palestras. [Londrina]: IAPAR; [Sete Lagoas]: Embrapa Milho e Sorgo, 2008. 1 CD-ROM.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 115. | | VALICENTE, F. H.; CARNEIRO, N. P.; UTIDA, R. H.; GUIMARAES, C. T.; MAGALHAES, J. V. de; PAIVA, E.; CARNEIRO, A. A. Transformation of maize Elite lines with cry1ca of Bacillus thuringiensis to control Spodoptera frugiperda. In: PACIFIC RIM CONFERENCE ON BIOTECHNOLOGY OF BACILLUS THURINGIENSIS AND ITS ENVIRONMENT IMPACT, 6., 2005, Victoria. Proceedings. Victoria: Biocontrol Network of Canada: Réseau Biocontrôle du Canada, 2007. p. 81-83.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 116. | | XAVIER, N. G.; SIMEONE, M. L. F.; QUEIROZ, V. A. V.; SILVA, C. B. da; MAGALHAES, J. V. de; PASTINA, M. M. Using multispectral images to assess bioactive compounds in sorghum. In: INTERNATIONAL WORKSHOP ON HYPERSPECTRAL IMAGING, 1., 2021, Campinas. Resumos. Campinas: Universidade Estadual de Campinas, 2021.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 117. | | VASCONCELOS, M. J. V. de; PARENTONI, S. N.; COELHO, A. M.; GUIMARAES, C. T.; MAGALHAES, J. V. de; ALVES, V. M. C.; SCHAFFERT, R. E.; MARRIEL, I. E.; GOMES, E. A. Abordagem genética, fisiológica e molecular no sistema solo-planta para a eficiência no uso de fósforo. In: SIMPÓSIO SOBRE INOVAÇÃO E CRIATIVIDADE CIENTÍFICA NA EMBRAPA, 1., 2008, Brasília, DF. Resumos... Brasília, DF: Embrapa, 2008.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 118. | | CHANDNANI, R.; QIN, T.; YE, H.; HU, H.; PANJVANI, K.; TOKIZAWA, M.; MACIAS, J. M.; MEDINA, A. A.; BERNARDINO, K. C.; PRADIER, P.-L.; BANIK, P.; MOONEY, A.; MAGALHAES, J. V. de; NGUYEN, H. T.; KOCHIAN, L. V. Application of an improved 2-dimensional high-throughput soybean root phenotyping platform to identify novel genetic variants regulating root architecture traits. Plant Phenomics, v. 5, article 97, 2023.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 119. | | LIGEYO, D. O.; GUDU, S.; OBURA, P.; OKALEBO, J. R.; OTHIENO, C. O.; OMBAKHO, G. A.; SCHAFFERT, R. E.; ALVES, V. M. C.; MAGALHAES, J. V. de; GAMA, E. E. G. e. Improvement of Kenyan maize germplasm for adaptability to low soil pH. In: GRANTEE CONFERENCE FROM PARTNERSHIPS TO COMMUNITY: THE ARC OF CHANGE IN THE CCRP, 2004, Vaals, The Netherlands. [Proceedings]. [Minneapolis]: The McKnight Foundation, 2004.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 120. | | MELO, J. O.; LANA, U. G. de P.; PIÑEROS, M. A.; ALVES, V. M. C.; GUIMARAES, C. T.; LIU, J.; ZHENG, Y.; ZHONG, S.; FEI, Z.; MARON, L. G.; SCHAFFERT, R. E.; KOCHIAN, L. V.; MAGALHAES, J. V. de. Incomplete transfer of accessory loci influencing SbMATE expression underlies genetic background effects for aluminum tolerance in sorghum. The Plant Journal, Oxford, v. 73, p. 276-288, Jan. 2013.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| Registros recuperados : 177 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Milho e Sorgo. |
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Data corrente: |
05/10/2023 |
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Data da última atualização: |
09/10/2023 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
CHANDNANI, R.; QIN, T.; YE, H.; HU, H.; PANJVANI, K.; TOKIZAWA, M.; MACIAS, J. M.; MEDINA, A. A.; BERNARDINO, K. C.; PRADIER, P.-L.; BANIK, P.; MOONEY, A.; MAGALHAES, J. V. de; NGUYEN, H. T.; KOCHIAN, L. V. |
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Afiliação: |
RAHUL CHANDNANI, UNIVERSITY OF SASKATCHEWAN; TONGFEI QIN, UNIVERSITY OF SASKATCHEWAN; HENG YE, UNIVERSITY OF MISSOURI; HAIFEI HU, UNIVERSITY OF WESTERN AUSTRALIA; KARIM PANJVANI, UNIVERSITY OF SASKATCHEWAN; MUTSUTOMO TOKIZAWA, UNIVERSITY OF SASKATCHEWAN; JAVIER MORA MACIAS, UNIVERSITY OF SASKATCHEWAN; ALMA ARMENTA MEDINA, UNIVERSITY OF SASKATCHEWAN; KARINE C. BERNARDINO; PIERRE-LUC PRADIER UNIVERSITY OF SASKATCHEWAN, UNIVERSITY OF SASKATCHEWAN; PANKAJ BANIK, UNIVERSITY OF SASKATCHEWAN; ASHLYN MOONEY, UNIVERSITY OF SASKATCHEWAN; JURANDIR VIEIRA DE MAGALHAES, CNPMS; HENRY T. NGUYEN, UNIVERSITY OF MISSOURI; LEON V. KOCHIAN, UNIVERSITY OF SASKATCHEWAN. |
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Título: |
Application of an improved 2-dimensional high-throughput soybean root phenotyping platform to identify novel genetic variants regulating root architecture traits. |
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Ano de publicação: |
2023 |
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Fonte/Imprenta: |
Plant Phenomics, v. 5, article 97, 2023. |
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DOI: |
https://doi.org/10.34133/plantphenomics.0097 |
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Idioma: |
Inglês |
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Conteúdo: |
Nutrient-efficient root system architecture (RSA) is becoming an important breeding objective for generating crop varieties with improved nutrient and water acquisition efficiency. Genetic variants shaping soybean RSA is key in improving nutrient and water acquisition. Here, we report on the use of an improved 2-dimensional high-throughput root phenotyping platform that minimizes background noise by imaging pouch-grown root systems submerged in water. We also developed a background image cleaning Python pipeline that computationally removes images of small pieces of debris and filter paper fibers, which can be erroneously quantified as root tips. This platform was used to phenotype root traits in 286 soybean lines genotyped with 5.4 million single-nucleotide polymorphisms. There was a substantially higher correlation in manually counted number of root tips with computationally quantified root tips (95% correlation), when the background was cleaned of nonroot materials compared to root images without the background corrected (79%). Improvements in our RSA phenotyping pipeline significantly reduced overestimation of the root traits influenced by the number of root tips. Genome-wide association studies conducted on the root phenotypic data and quantitative gene expression analysis of candidate genes resulted in the identification of 3 putative positive regulators of root system depth, total root length and surface area, and root system volume and surface area of thicker roots (DOF1-like zinc finger transcription factor, protein of unknown function, and C2H2 zinc finger protein). We also identified a putative negative regulator (gibberellin 20 oxidase 3) of the total number of lateral roots. MenosNutrient-efficient root system architecture (RSA) is becoming an important breeding objective for generating crop varieties with improved nutrient and water acquisition efficiency. Genetic variants shaping soybean RSA is key in improving nutrient and water acquisition. Here, we report on the use of an improved 2-dimensional high-throughput root phenotyping platform that minimizes background noise by imaging pouch-grown root systems submerged in water. We also developed a background image cleaning Python pipeline that computationally removes images of small pieces of debris and filter paper fibers, which can be erroneously quantified as root tips. This platform was used to phenotype root traits in 286 soybean lines genotyped with 5.4 million single-nucleotide polymorphisms. There was a substantially higher correlation in manually counted number of root tips with computationally quantified root tips (95% correlation), when the background was cleaned of nonroot materials compared to root images without the background corrected (79%). Improvements in our RSA phenotyping pipeline significantly reduced overestimation of the root traits influenced by the number of root tips. Genome-wide association studies conducted on the root phenotypic data and quantitative gene expression analysis of candidate genes resulted in the identification of 3 putative positive regulators of root system depth, total root length and surface area, and root system volume and surface area of thicker roots (... Mostrar Tudo |
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Thesagro: |
Genética Vegetal; Raiz; Seleção Fenótipa; Soja. |
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Categoria do assunto: |
G Melhoramento Genético |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1157100/1/Application-of-an-improved-2-dimensional-high-throughput-soybean-root.pdf
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Marc: |
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245 $aApplication of an improved 2-dimensional high-throughput soybean root phenotyping platform to identify novel genetic variants regulating root architecture traits.$h[electronic resource]
260 $c2023
520 $aNutrient-efficient root system architecture (RSA) is becoming an important breeding objective for generating crop varieties with improved nutrient and water acquisition efficiency. Genetic variants shaping soybean RSA is key in improving nutrient and water acquisition. Here, we report on the use of an improved 2-dimensional high-throughput root phenotyping platform that minimizes background noise by imaging pouch-grown root systems submerged in water. We also developed a background image cleaning Python pipeline that computationally removes images of small pieces of debris and filter paper fibers, which can be erroneously quantified as root tips. This platform was used to phenotype root traits in 286 soybean lines genotyped with 5.4 million single-nucleotide polymorphisms. There was a substantially higher correlation in manually counted number of root tips with computationally quantified root tips (95% correlation), when the background was cleaned of nonroot materials compared to root images without the background corrected (79%). Improvements in our RSA phenotyping pipeline significantly reduced overestimation of the root traits influenced by the number of root tips. Genome-wide association studies conducted on the root phenotypic data and quantitative gene expression analysis of candidate genes resulted in the identification of 3 putative positive regulators of root system depth, total root length and surface area, and root system volume and surface area of thicker roots (DOF1-like zinc finger transcription factor, protein of unknown function, and C2H2 zinc finger protein). We also identified a putative negative regulator (gibberellin 20 oxidase 3) of the total number of lateral roots.
650 $aGenética Vegetal
650 $aRaiz
650 $aSeleção Fenótipa
650 $aSoja
700 1 $aQIN, T.
700 1 $aYE, H.
700 1 $aHU, H.
700 1 $aPANJVANI, K.
700 1 $aTOKIZAWA, M.
700 1 $aMACIAS, J. M.
700 1 $aMEDINA, A. A.
700 1 $aBERNARDINO, K. C.
700 1 $aPRADIER, P.-L.
700 1 $aBANIK, P.
700 1 $aMOONEY, A.
700 1 $aMAGALHAES, J. V. de
700 1 $aNGUYEN, H. T.
700 1 $aKOCHIAN, L. V.
773 $tPlant Phenomics$gv. 5, article 97, 2023.
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Embrapa Milho e Sorgo (CNPMS) |
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