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| Registros recuperados : 29 | |
| 3. |  | SILVA, D. A.; MULLER, B. V.; KUIASKI, E. C.; ELOY, E.; BEHLING, A.; COLAÇO, C. M. Propriedades da madeira de Eucalyptus benthamii para produção de energia. Pesquisa Florestal Brasileira, Colombo, v. 35, n. 84, p. 481-485, out./dez. 2015. Nota científica.| Biblioteca(s): Embrapa Florestas. |
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| 5. | | SUPERTI, B. F. V.; SOUZA, A. P. de; MÜLLER, B. C.; SILVA, Z. da; ZANELLA, R.; ZANELLA, E. L.; MARQUES, M. G. Comparison of different surgical procedures to prepare teaser boars. In: ANNUAL MEETING OF THE BRAZILIAN EMBRYO TECHNOLOGY SOCIETY, 31., 2017, Cabo de Santo Agostinho, PE. Proceedings... Belo Horizonte: Colégio Brasileiro de Reprodução Animal, 2017. p. 809.| Biblioteca(s): Embrapa Suínos e Aves. |
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| 6. | | MÜLLER, B. S. F.; PAPPAS JUNIOR, G. J.; PEREIRA, M.; GUIMARÃES, C. M.; ZAMBUZZI-CARVALHO, P. F.; SILVEIRA, R. D. D.; BRONDANI, C.; BRONDANI, R. P. V. Análise de genes diferencialmente expressos em Phaseolus vulgaris sob condições de déficit hídrico. In: CONGRESSO BRASILEIRO DE GENÉTICA, 56., 2010, Guarujá. Resumos... Ribeirão Preto: Sociedade Brasileira de Genética, 2010. p. 259.| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 7. | | SUPERTI, B. F. V.; SOUZA, A. P. de; MÜLLER, B. C.; SILVA, Z. da; ZANELLA, E. L.; ZANELLA, R.; MARQUES, M. G. Development of effective and minimally invasive surgical techniques for the preparation of intact, sterile boars. Journal of Swine Health and Production, v. 20, n. 5, p. 253-260, 2021.| Biblioteca(s): Embrapa Suínos e Aves. |
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| 8. | | GRATTAPAGLIA, D.; RESENDE, R.; MÜLLER, B.; LIMA, B.; TAN, B.; TAKAHASHI, E.; ESTOPA, R.; GARCIA, C.; ROSSE, L.; SILVA JUNIOR, O. Genomic prediction of complex traits: genomics and quantitative genetics converge to innovate Eucalyptus breeding in Brazil. Pesquisa Florestal Brasileira, Colombo, v. 39, (nesp), e201902043, 2019. p. 174. Edição especial dos resumos do IUFRO World Congress, 25., 2019, Curitiba.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 9. | | ESTOPA, R. A.; PALUDETO, J. G. Z.; MÜLLER, B. S. F.; OLIVEIRA, R. A. de; AZEVEDO, C. F.; RESENDE, M. D. V. de; TAMBARUSSI, E. V.; GRATTAPAGLIA, D. Genomic prediction of growth and wood quality traits in Eucalyptus benthamii using different genomic models and variable SNP genotyping density. New Forests, 54, 2023.| Biblioteca(s): Embrapa Café; Embrapa Recursos Genéticos e Biotecnologia. |
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| 10. | | MÜLLER, B. S. F.; NEVES, L. G.; RESENDE JÚNIOR, M. F. R.; MUÑOZ, P. R.; KIRST, M.; SANTOS, P. E. T. dos; PALUDZYSZYN FILHO, E.; GRATTAPAGLIA, D. Genomic selection for growth traits in Eucalyptus benthamii and E. pellita populations using a genome-wide Eucalyptus 60K SNPs chip. In: IUFRO TREE BIOTECHNOLOGY CONFERENCE, 2015, Florence. Forests: the importance to the planet and society. [S.l.]: IBBR: ICCOM, 2015.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 11. | | MÜLLER, B. S. F.; NEVES, L. G.; RESENDE JÚNIOR, M. F. R.; MUÑOZ, P. R.; KIRST, M.; SANTOS, P. E. T. dos; PALUDZYSZYN FILHO, E.; GRATTAPAGLIA, D. Genomic selection for growth traits in Eucalyptus benthamii and E. pellita populations using a genome-wide Eucalyptus 60K SNPs chip. In: IUFRO TREE BIOTECHNOLOGY CONFERENCE, 2015, Florence. Forests: the importance to the planet and society. [S.l.]: IBBR: ICCOM, 2015. Pen-drive.| Biblioteca(s): Embrapa Florestas. |
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| 12. | | MÜLLER, B. S. F.; GUIMARÃES, C. M.; SILVEIRA, R. D. D.; ABREU, E. M.; SANCHES, B. A.; ZAMBUZZI-CARVALHO, P. F.; BRONDANI, C.; BRONDANI, R. P. V. Desenvolvimento de banco ESTs para feijão comum enriquecido para genes de resposta ao estresse hídrico. In: SEMINÁRIO JOVENS TALENTOS, 4., 2010, Santo Antônio de Goiás. Resumos apresentados. Santo Antônio de Goiás: Embrapa Arroz e Feijão, 2010. p. 13. (Embrapa Arroz e Feijão. Documentos, 257).| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 13. | | GRATTAPAGLIA, D.; SILVA JUNIOR, O. B. da; RESENDE, R. T.; CAPPA, E. P.; MÜLLER, B. S. F.; TAN, B.; ISIK, F.; RATCLIFFE, B.; EL-KASSABY, Y. A. Quantitative genetics and genomics converge to accelerate forest tree breeding. Frontiers in Plant Science, v. 9, article 1693, 2018. Na publicação: Orzenil B. Silva-Junior.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 14. | | MÜLLER, B. S. de F.; SAKAMOTO, T.; MENEZES, I. P. P. de; PRADO, G. S.; MARTINS, W. S.; BRONDANI, C.; BARROS, E. G. de; VIANELLO, R. P. Analysis of BAC-end sequences in common bean (Phaseolus vulgaris L.) towards the development and characterization of long motifs SSRs. Plant Molecular Biology, Dordrecht, v. 86, n. 4/5, p. 455-470, Nov. 2014.| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 15. | | AGUIAR, A. V. de; LOPES, M. T. G.; GAIOTTO, F. A.; BITTENCOURT, F.; DERVINIS, C.; MULLER, B. S. F.; SANTOS, R. F. dos; QUISEN, R. C.; KIRST, M. Transcriptome analysis of Euterpe edulis and identification of microsatellite markers. In: IUFRO GENOMICS & FOREST TREE GENETICS, 2016, Arcachon. Book of abstracts. [S.l.]: IUFRO, 2016. p. 90-91.| Biblioteca(s): Embrapa Amazônia Ocidental. |
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| 16. | | AGUIAR, A. V. de; LOPES, M. T. G.; GAIOTTO, F. A.; BITTENCOURT, F.; DERVINIS, C.; MULLER, B. S. F.; SANTOS, R. F. dos; QUISEN, R. C.; KIRST, M. Transcriptome analysis of Euterpe edulis and identification of microsatellite markers. In: IUFRO GENOMICS & FOREST TREE GENETICS, 2016, Arcachon. Book of abstracts. [S.l.]: IUFRO, 2016. p. 90-91.| Biblioteca(s): Embrapa Florestas. |
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| 17. | | SUPERTI, B. F. V.; SOUZA, A. P. de; MÜLLER, B. C.; SILVA, Z. da; ZANELLA, R.; ZANELLA, E. L.; MARQUES, M. G. Técnicas cirúrgicas para preparo de rufiões suínos. Suinocultura Industrial, Itu, ed. 281, ano 40, n. 02, p. 14-17, 2018.| Biblioteca(s): Embrapa Suínos e Aves. |
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| 18. | | MULLER, B. S. F.; NEVES, L. G.; LIMA, B. M.; GARCIA, C. C.; MISSIAGGIA, A.; AGUIAR, A. M.; TAKAHASHI, E. K.; SILVA JUNIOR, O. B. da; KIRST, M.; GRATTAPAGLIA, D. Joint GWAS analysis for growth traits across four Eucalyptus breeding populations. In: PLANT AND ANIMAL GENOME CONFERENCE, 25., 2017, San Diego. [Abstracts...]. San Diego, CA: [s.n.], 2017. W338.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 19. | | MÜLLER, B. S. F.; PAPPAS JUNIOR, G. J.; COSTA, M. M. C.; PEREIRA, M.; GUIMARÃES, C. M.; ZAMBUZZI-CARVALHO, P. F.; SILVEIRA, R. D. D.; BRONDANI, C.; BRONDANI, R. P. V. Análise do transcriptoma de Phaseolus vulgaris em resposta ao déficit hídrico. In: CONGRESSO DE PESQUISA, ENSINO E EXTENSÃO, 7., 2010, Goiânia. Conhecimento e desenvolvimento sustentável: anais... Goiânia: UFG, 2010. p. 4248-4252. Conpeex 2010.| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 20. | | LOPES, M. T. G.; GAIOTTO, F. A.; AGUIAR, A. V. de; FAHRENKROG, A.; BITTENCOURT, F.; DERVINIS, C.; MULLER, B. S. F.; SANTOS, R. F. dos; QUISEN, R. C.; KIRST, M. Next-generation transcriptome assembly of an Amazon palm (Euterpe precatoria). In: IUFRO GENOMICS & FOREST TREE GENETICS, 2016, Arcachon. Book of abstracts. [S.l.]: IUFRO, 2016. p. 90.| Biblioteca(s): Embrapa Amazônia Ocidental. |
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| Registros recuperados : 29 | |
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 | Acesso ao texto completo restrito à biblioteca da Embrapa Arroz e Feijão. Para informações adicionais entre em contato com cnpaf.biblioteca@embrapa.br. |
Registro Completo
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Biblioteca(s): |
Embrapa Arroz e Feijão. |
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Data corrente: |
03/03/2017 |
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Data da última atualização: |
04/10/2021 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
B - 1 |
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Autoria: |
VALDISSER, P. A. M. R.; PAPPAS JUNIOR, G. J.; MENEZES, I. P. P. de; MÜLLER, B. S. F.; PEREIRA, W. J.; NARCISO, M. G.; BRONDANI, C.; SOUZA, T. L. P. O.; BORBA, T. C. O.; VIANELLO, R. P. |
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Afiliação: |
PAULA ARIELLE M RIBEIRO VALDISSER, CNPAF; GEORGIOS J. PAPPAS JUNIOR, UNB; IVANDILSON P. P. DE MENEZES, INSTITUTO FEDERAL GOIANO, Urutaí-GO; BARBARA S. F. MULLER, UNB; WENDELL J. PEREIRA, UFG; MARCELO GONCALVES NARCISO, CNPAF; CLAUDIO BRONDANI, CNPAF; THIAGO LIVIO PESSOA OLIV DE SOUZA, CNPAF; TEREZA CRISTINA DE OLIVEIRA BORBA, CNPAF; ROSANA PEREIRA VIANELLO, CNPAF. |
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Título: |
SNP discovery in common bean by restriction-associated DNA (RAD) sequencing for genetic diversity and population structure analysis. |
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Ano de publicação: |
2016 |
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Fonte/Imprenta: |
Molecular Genetics and Genomics, v. 291, n. 3, p. 1277-1291, June 2016. |
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ISSN: |
1617-4623 |
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DOI: |
10.1007/s00438-016-1182-3 |
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Idioma: |
Inglês |
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Conteúdo: |
Researchers have made great advances into the development and application of genomic approaches for common beans, creating opportunities to driving more real and applicable strategies for sustainable management of the genetic resource towards plant breeding. This work provides useful polymorphic single-nucleotide polymorphisms (SNPs) for high-throughput common bean genotyping developed by RAD (restriction site-associated DNA) sequencing. The RAD tags were generated from DNA pooled from 12 common bean genotypes, including breeding lines of different gene pools and market classes. The aligned sequences identified 23,748 putative RAD-SNPs, of which 3357 were adequate for genotyping; 1032 RADSNPs with the highest ADT (assay design tool) score are presented in this article. The RAD-SNPs were structurally annotated in different coding (47.00 %) and non-coding (53.00 %) sequence components of genes. A subset of 384 RAD-SNPs with broad genome distribution was used to genotype a diverse panel of 95 common bean germplasms and revealed a successful amplification rate of 96.6 %, showing 73 % of polymorphic SNPs within the Andean group and 83 % in the Mesoamerican group. A slightly increased He (0.161, n = 21) value was estimated for the Andean gene pool, compared to the Mesoamerican group (0.156, n = 74). For the linkage disequilibrium (LD) analysis, from a group of 580 SNPs (289 RAD-SNPs and 291 BARC-SNPs) genotyped for the same set of genotypes, 70.2 % were in LD, decreasing to 0.10 %in the Andean group and 0.77 % in the Mesoamerican group. Haplotype patterns spanning 310 Mb of the genome (60 %) were characterized in samples from different origins. However, the haplotype frameworks were under-represented for the Andean (7.85 %) and Mesoamerican (5.55 %) gene pools separately. In conclusion, RAD sequencing allowed the discovery of hundreds of useful SNPs for broad genetic analysis of common bean germplasm. From now, this approach provides an excellent panel of molecular tools for whole genome analysis, allowing integrating and better exploring the common bean breeding practices. MenosResearchers have made great advances into the development and application of genomic approaches for common beans, creating opportunities to driving more real and applicable strategies for sustainable management of the genetic resource towards plant breeding. This work provides useful polymorphic single-nucleotide polymorphisms (SNPs) for high-throughput common bean genotyping developed by RAD (restriction site-associated DNA) sequencing. The RAD tags were generated from DNA pooled from 12 common bean genotypes, including breeding lines of different gene pools and market classes. The aligned sequences identified 23,748 putative RAD-SNPs, of which 3357 were adequate for genotyping; 1032 RADSNPs with the highest ADT (assay design tool) score are presented in this article. The RAD-SNPs were structurally annotated in different coding (47.00 %) and non-coding (53.00 %) sequence components of genes. A subset of 384 RAD-SNPs with broad genome distribution was used to genotype a diverse panel of 95 common bean germplasms and revealed a successful amplification rate of 96.6 %, showing 73 % of polymorphic SNPs within the Andean group and 83 % in the Mesoamerican group. A slightly increased He (0.161, n = 21) value was estimated for the Andean gene pool, compared to the Mesoamerican group (0.156, n = 74). For the linkage disequilibrium (LD) analysis, from a group of 580 SNPs (289 RAD-SNPs and 291 BARC-SNPs) genotyped for the same set of genotypes, 70.2 % were in LD, decreasing to 0.10 %... Mostrar Tudo |
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Thesagro: |
DNA; Feijão; Phaseolus vulgaris. |
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Thesaurus NAL: |
Beans; Fabaceae; Genetic variation; Haplotypes; Linkage disequilibrium; Single nucleotide polymorphism. |
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Categoria do assunto: |
S Ciências Biológicas |
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Marc: |
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100 1 $aVALDISSER, P. A. M. R.
245 $aSNP discovery in common bean by restriction-associated DNA (RAD) sequencing for genetic diversity and population structure analysis.$h[electronic resource]
260 $c2016
520 $aResearchers have made great advances into the development and application of genomic approaches for common beans, creating opportunities to driving more real and applicable strategies for sustainable management of the genetic resource towards plant breeding. This work provides useful polymorphic single-nucleotide polymorphisms (SNPs) for high-throughput common bean genotyping developed by RAD (restriction site-associated DNA) sequencing. The RAD tags were generated from DNA pooled from 12 common bean genotypes, including breeding lines of different gene pools and market classes. The aligned sequences identified 23,748 putative RAD-SNPs, of which 3357 were adequate for genotyping; 1032 RADSNPs with the highest ADT (assay design tool) score are presented in this article. The RAD-SNPs were structurally annotated in different coding (47.00 %) and non-coding (53.00 %) sequence components of genes. A subset of 384 RAD-SNPs with broad genome distribution was used to genotype a diverse panel of 95 common bean germplasms and revealed a successful amplification rate of 96.6 %, showing 73 % of polymorphic SNPs within the Andean group and 83 % in the Mesoamerican group. A slightly increased He (0.161, n = 21) value was estimated for the Andean gene pool, compared to the Mesoamerican group (0.156, n = 74). For the linkage disequilibrium (LD) analysis, from a group of 580 SNPs (289 RAD-SNPs and 291 BARC-SNPs) genotyped for the same set of genotypes, 70.2 % were in LD, decreasing to 0.10 %in the Andean group and 0.77 % in the Mesoamerican group. Haplotype patterns spanning 310 Mb of the genome (60 %) were characterized in samples from different origins. However, the haplotype frameworks were under-represented for the Andean (7.85 %) and Mesoamerican (5.55 %) gene pools separately. In conclusion, RAD sequencing allowed the discovery of hundreds of useful SNPs for broad genetic analysis of common bean germplasm. From now, this approach provides an excellent panel of molecular tools for whole genome analysis, allowing integrating and better exploring the common bean breeding practices.
650 $aBeans
650 $aFabaceae
650 $aGenetic variation
650 $aHaplotypes
650 $aLinkage disequilibrium
650 $aSingle nucleotide polymorphism
650 $aDNA
650 $aFeijão
650 $aPhaseolus vulgaris
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700 1 $aBRONDANI, C.
700 1 $aSOUZA, T. L. P. O.
700 1 $aBORBA, T. C. O.
700 1 $aVIANELLO, R. P.
773 $tMolecular Genetics and Genomics$gv. 291, n. 3, p. 1277-1291, June 2016.
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