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| Registros recuperados : 72 | |
| 23. |  | AGUIAR, E.; LOBO, F. P.; OLMO, R.; FERREIRA, F.; OLIVEIRA, G.; HULTMAN, K.; JAFARI, N.; CARTHEW, R.; MARQUES, J. Understanding innate immune responses to DNA viruses using the Drosophila melanogaster model. In: INTERNATIONAL CONFERENCE OF THE BRAZILIAN ASSOCIATION FOR BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 8., 2012, Campinas. Abstract book... Ribeirão Preto: AB3C, 2012. Não paginado. X-MEETING 2012.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 24. | | CINTRA, L. C.; ZERLOTINI, A.; SILVA, F. R. da; LOBO, F. P.; YAMAGISHI, M. E. B.; KUSER-FALCÃO, P. R. K.; GIACHETTO, P. F. Embrapa Bioinformatic Multi-user laboratory. In: INTERNATIONAL PLANT & ANIMAL GENOME, 21., 2013, San Diego. [Abstracts...]. [S.l.: s.n.], 2013. Não paginado. Pôster 1017.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 25. | | KUSER-FALCÃO, P. R.; YAMAGISHI, M. E. B.; GIACHETTO, P. F.; SILVA, F. R.; LOBO, F. P.; CINTRA, L. C.; ZERLOTINI, A.; HIGA, R.; VIEIRA, F. Embrapa Bioinformatics Multi-Users Laboratory - LMB. In: INTERNATIONAL CONFERENCE OF THE BRAZILIAN ASSOCIATION FOR BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 8., 2012, Campinas. Abstract book... Ribeirão Preto: AB3C, 2012. Não paginado. X-MEETING 2012.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 26. | | LOBO, F. P.; RODRIGUES, M. R.; RODRIGUES, G. O. L.; HILÁRIO, H. O.; SOUZA, R. A.; TAUCH, A.; MIYOSHI, A.; FRANCO, G. C.; AZEVEDO, V.; FRANCO, G. R. KOMODO: a web tool for detecting and visualizing biased distribution of groups of homologous genes in monophyletic taxa. Nucleic Acids Research, Oxford, v. 40, p. W491-W497, 2012.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 27. | | CARNEIRO, N.; NODA, R.; MAGALHÃES, P.; MENEZES, C.; SCHAFFERT, R.; BARROS, B.; GUIMARÃES, C.; LOBO, F. P.; ZERLOTINI, A.; MAGALHÃES, J. Association of differentially expressed genes with drought tolerant sorghum using computer analysis. In: ANNUAL INTERNATIONAL CONFERENCE ON INTELLIGENT SYSTEMS FOR MOLECULAR BIOLOGY, 21.; EUROPEAN CONFERENCE ON COMPUTATIONAL BIOLOGY, 12., 2013, Berlin. Posters... Berlin: ISCB, 2013. Pôster F52.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Milho e Sorgo. |
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| 28. | | LOBO, F. P.; CINTRA, L. C.; VARELA, E. S.; ALVES, A. L.; VILLELA, L. C. V.; SILVA, N. M. A. da; PAIVA, S. R.; CAETANO, A. R. de novo genome assembly of the South American freshwater fish Tambaqui (Colossoma macropomum). In: PLANT & ANIMAL GENOME CONFERENCE, 23., 2015, San Diego, CA. [Abstracts...]. San Diego: [s.n.], 2015. não paginado. Pôster P0231.| Biblioteca(s): Embrapa Pesca e Aquicultura. |
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| 29. | | LOBO, F. P.; CINTRA, L. C.; VARELA, E. S.; ALVES, A. L.; VILLELA, L. C. V.; SILVA, N. M. A. da; PAIVA, S. R.; CAETANO, A. R. de novo genome assembly of the South American freshwater fish Tambaqui (Colossoma macropomum). In: PLANT & ANIMAL GENOME CONFERENCE, 23., 2015, San Diego, CA. [Abstracts...]. San Diego: [s.n.], 2015. não paginado. PAG 2015. Pôster P0231.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 30. | | MOURÃO, M. M.; BITAR, M. L.; LOBO, F. P.; GRYNBERG, P.; BORONI, M.; WAISBERG, M.; MACEDO, A. M.; MACHADO, C. R.; FRANCO, G. R. Revealing new perspectives on the regulation of gene expression by the trans-splicing mechanism in Shistosoma mansoni. In: INTERNATIONAL CONFERENCE OF THE BRAZILIAN ASSOCIATION FOR BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 7.; INTERNATIONAL CONFERENCE OF THE IBEROAMERICAN SOCIETY FOR BIOINFORMATICS, 3., 2011, Florianópolis. Proceedings... Florianópolis: Associação Brasileira de Bioinformática e Biologia Computacional, 2011. Não paginado. X-MEETING 2011.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 31. | | MENDES, T. A. O.; LOBO, F. P.; RODRIGUES, T. S.; RODRIGUES-LUIZ, G. F.; ROCHA, W. D. da; FUJIWARA, R. T.; TEIXEIRA, S. M. R.; BARTHOLOMEU, D. C. Repeat-enriched proteins are related to host cell invasion and immune evasion in parasitic protozoa. Molecular Biology and Evolution, Chicago, v. 30, n. 4, p. 951-963, 2013.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 32. | | GERHARDT, I. R.; GIACHETTO, P. F.; YAMAGISHI, M. E. B.; LOBO, F. P.; PENCHEL, R. M.; MISSIAGGIA, A. A.; ZERLOTINI, A.; SILVA, F. R. da. RNA-seq analysis of Eucalyptus genotypes that differ in carbon allocation. In: ANNUAL INTERNATIONAL CONFERENCE ON INTELLIGENT SYSTEMS FOR MOLECULAR BIOLOGY; STRUCTURAL BIOINFORMATICS AND COMPUTATIONAL BIOPHYSICS CONFERENCE MEETING, 8., 2012, Long Beach, California. Abstracts. 1 Pôster. Poster G19.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Florestas. |
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| 33. | | GERHARDT, I. R.; GIACHETTO, P. F.; YAMAGISHI, M. E. B.; LOBO, F. P.; PENCHEL, R. M.; MISSIAGGIA, A. A.; ZERTOLINI, A.; SILVA, F. R. da. RNA-Seq Analysis of Eucalyptus Genotypes that Differ in Carbon Allocation. In: INTERNATIONAL CONFERENCE OF THE BRAZILIAN ASSOCIATION FOR BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 8., 2012, Campinas. Abstract book. [S.l.: s.n.], 2012.| Biblioteca(s): Embrapa Florestas. |
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| 34. | | LOBO, F. P.; CINTRA, L. C.; VARELA, E. S.; ALVES, A. L.; SILVA, N. M. A. da; IANELLA, P.; PAIVA, S. R.; CAETANO, A. R. Genome Sequencing and de novo assembly of the South American Tiger Catfish (Pseudoplatystoma punctifer). In: PLANT & ANIMAL GENOME CONFERENCE, 24., 2016, San Diego, CA. [Abstracts...]. San Diego: [s. n.], 2016. Não paginado. PAG 2016. Pôster P0481.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 35. | | LOBO, F. P.; CINTRA, L. C.; VARELA, E. S.; ALVES, A. L.; SILVA, N. M. A. da; IANELLA, P.; PAIVA, S. R.; CAETANO, A. R. Genome sequencing and de novo assembly of the South American Tiger Catfish (Pseudoplatystoma punctifer). In: PLANT & ANIMAL GENOME CONFERENCE, 24., 2016, San Diego, CA. [Abstracts...]. San Diego: [s. n.], 2016. Não paginado. PAG 2016. Pôster P0481.| Biblioteca(s): Embrapa Pesca e Aquicultura. |
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| 36. | | LOBO, F. P.; CINTRA, L. C.; VARELA, E. S.; ALVES, A. L.; SILVA, N. M. A. da; IANELLA, P.; PAIVA, S. R.; CAETANO, A. R. Genome Sequencing and de novo assembly of the South American Tiger Catfish (Pseudoplatystoma punctifer). In: PLANT & ANIMAL GENOME CONFERENCE, 24., 2016, San Diego, CA. [Abstracts...]. San Diego: [s.n.], 2016. Não paginado. PAG 2016. Pôster P0481.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 37. | | ZERLOTINI NETO, A.; LOBO, F. P.; CINTRA, L. C.; YAMAGISHI, M. E. B.; VARELA, E. S.; PAIVA, S. R.; IANELLA, P.; CAETANO, A. R. Genome sequencing and de novo assembly of the South American tiger catfish (Pseudoplatystoma Punctifer) using 10X sequencing data. In: PLANT AND ANIMAL GENOME CONFERENCE, 27., 2019, San Diego. Plant and animal genome abstracts. Livingston, NJ: Scherago, 2019. PO0249| Biblioteca(s): Embrapa Pesca e Aquicultura. |
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| 38. | | ZERLOTINI NETO, A.; LOBO, F. P.; CINTRA, L. C.; YAMAGISHI, M. E. B.; VARELA, E. S.; PAIVA, S. R.; IANELLA, P.; CAETANO, A. R. Genome sequencing and de novo assembly of the South American tiger catfish (Pseudoplatystoma Punctifer) using 10X sequencing data. In: PLANT AND ANIMAL GENOME CONFERENCE, 27., 2019, San Diego. Abstracts... [S.l.: s.n.], 2019. Na publicação: Adhemar Zerlotini. PAG 2019. PO0249.| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Recursos Genéticos e Biotecnologia. |
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| 39. | | CAETANO, A. R.; IANELLA, P.; VARELA, E. S.; PAIVA, S. R.; LOBO, F. P.; CINTRA, L. C.; ZERLOTINI NETO, A.; YAMAGISHI, M. E. B. Genome sequencing and de novo assembly of tambaqui (Colossoma macropomum). In: AQUACULTURE, 2019, New Orleans. Aquaculture: the big choice! abstracts. [S.l.: s.n.], 2019. p. 182.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 40. | | CAETANO, A. R.; IANELLA, P.; VARELA, E. S.; PAIVA, S. R.; LOBO, F. P.; CINTRA, L. C.; ZERLOTINI NETO, A.; YAMAGISHI, M. E. B. Genome sequencing and de novo assembly of tambaqui (Colossoma macropomum). In: AQUACULTURE, 2019, New Orleans. Abstracts. [S.l.]: Word Aquaculture Society, 2019.| Biblioteca(s): Embrapa Pesca e Aquicultura; Embrapa Recursos Genéticos e Biotecnologia. |
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| Registros recuperados : 72 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Agricultura Digital. |
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Data corrente: |
06/12/2011 |
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Data da última atualização: |
24/01/2020 |
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Tipo da produção científica: |
Resumo em Anais de Congresso |
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Autoria: |
MOURÃO, M. M.; BITAR, M. L.; LOBO, F. P.; GRYNBERG, P.; BORONI, M.; WAISBERG, M.; MACEDO, A. M.; MACHADO, C. R.; FRANCO, G. R. |
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Afiliação: |
MARINA MORAES MOURÃO, FIOCRUZ; MAINÁ LAST BITAR, UFMG, NUBIO; FRANCISCO PEREIRA LOBO, CNPTIA; PRISCILA GRYNBERG, UFMG; MARIANA BORONI, UFMG; MICHAEL WAISBERG, NIH; ANDRÉA MARA MACEDO, UFMG; CARLOS RENATO MACHADO, UFMG; GLÓRIA REGINA FRANCO, UFMG. |
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Título: |
Revealing new perspectives on the regulation of gene expression by the trans-splicing mechanism in Shistosoma mansoni. |
|
Ano de publicação: |
2011 |
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Fonte/Imprenta: |
In: INTERNATIONAL CONFERENCE OF THE BRAZILIAN ASSOCIATION FOR BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 7.; INTERNATIONAL CONFERENCE OF THE IBEROAMERICAN SOCIETY FOR BIOINFORMATICS, 3., 2011, Florianópolis. Proceedings... Florianópolis: Associação Brasileira de Bioinformática e Biologia Computacional, 2011. |
|
Páginas: |
Não paginado. |
|
Idioma: |
Inglês |
|
Notas: |
X-MEETING 2011. |
|
Conteúdo: |
Schistosomiasis is the second most prevalent neglected tropical disease caused by a Trematode flatworm from the genus Schistosoma. Schistosomes possess a complex life cycle requiring numerous and intricate mechanisms to rule transcriptional and post-transcriptional gene regulation. Thus, it is believed that spliced leader (SL) trans-splicing could play an important role in the parasite biology. The purpose of this study was is to shed light on the function of the trans-splicing mechanism in S. mansoni by searching gene categories that could be target of this process and attempting to silence transcripts harboring the SL sequence. Here, we analyze different life stages cDNA libraries enriched on SL-transcripts of S. mansoni. Our results show that, contrary to previous hypothesis, trans-spliced transcripts are associated to specific gene categories, such as carbohydrate metabolic process, RNA metabolism and DNA repair. Several trans-spliced transcripts were verified in at least two different stages of the S. mansoni life cycle. The marjority of the SL-transcripts are shared among males, females and mixed-sex adults, being followed by SL-transcripts shared by all adults and schistosomula. Among the analyzed life stages, the one presenting the lower number of shared genes is the egg. The results also reveal a set of SL-transcripts that are observed only in one stage of the life cycle and could represent transcripts that undergo stage-specific trans-splicing. Finally, we demonstrated that trans-splicing knockdown in sprocysts caused a reduction on the levels of all tested trans-spliced transcripts, but surprisingly the only phenotypic effect observed was a diminished larvae size. Financial support: CNPq, FAPEMIG MenosSchistosomiasis is the second most prevalent neglected tropical disease caused by a Trematode flatworm from the genus Schistosoma. Schistosomes possess a complex life cycle requiring numerous and intricate mechanisms to rule transcriptional and post-transcriptional gene regulation. Thus, it is believed that spliced leader (SL) trans-splicing could play an important role in the parasite biology. The purpose of this study was is to shed light on the function of the trans-splicing mechanism in S. mansoni by searching gene categories that could be target of this process and attempting to silence transcripts harboring the SL sequence. Here, we analyze different life stages cDNA libraries enriched on SL-transcripts of S. mansoni. Our results show that, contrary to previous hypothesis, trans-spliced transcripts are associated to specific gene categories, such as carbohydrate metabolic process, RNA metabolism and DNA repair. Several trans-spliced transcripts were verified in at least two different stages of the S. mansoni life cycle. The marjority of the SL-transcripts are shared among males, females and mixed-sex adults, being followed by SL-transcripts shared by all adults and schistosomula. Among the analyzed life stages, the one presenting the lower number of shared genes is the egg. The results also reveal a set of SL-transcripts that are observed only in one stage of the life cycle and could represent transcripts that undergo stage-specific trans-splicing. Finally, we demonstr... Mostrar Tudo |
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Palavras-Chave: |
Expressão gênica. |
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Thesagro: |
Schistosoma Mansoni. |
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Thesaurus NAL: |
Gene expression. |
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Categoria do assunto: |
S Ciências Biológicas |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/49484/1/Shistosoma.pdf
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|
Marc: |
LEADER 02792nam a2200265 a 4500
001 1908752
005 2020-01-24
008 2011 bl uuuu u00u1 u #d
100 1 $aMOURÃO, M. M.
245 $aRevealing new perspectives on the regulation of gene expression by the trans-splicing mechanism in Shistosoma mansoni.$h[electronic resource]
260 $aIn: INTERNATIONAL CONFERENCE OF THE BRAZILIAN ASSOCIATION FOR BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 7.; INTERNATIONAL CONFERENCE OF THE IBEROAMERICAN SOCIETY FOR BIOINFORMATICS, 3., 2011, Florianópolis. Proceedings... Florianópolis: Associação Brasileira de Bioinformática e Biologia Computacional$c2011
300 $aNão paginado.
500 $aX-MEETING 2011.
520 $aSchistosomiasis is the second most prevalent neglected tropical disease caused by a Trematode flatworm from the genus Schistosoma. Schistosomes possess a complex life cycle requiring numerous and intricate mechanisms to rule transcriptional and post-transcriptional gene regulation. Thus, it is believed that spliced leader (SL) trans-splicing could play an important role in the parasite biology. The purpose of this study was is to shed light on the function of the trans-splicing mechanism in S. mansoni by searching gene categories that could be target of this process and attempting to silence transcripts harboring the SL sequence. Here, we analyze different life stages cDNA libraries enriched on SL-transcripts of S. mansoni. Our results show that, contrary to previous hypothesis, trans-spliced transcripts are associated to specific gene categories, such as carbohydrate metabolic process, RNA metabolism and DNA repair. Several trans-spliced transcripts were verified in at least two different stages of the S. mansoni life cycle. The marjority of the SL-transcripts are shared among males, females and mixed-sex adults, being followed by SL-transcripts shared by all adults and schistosomula. Among the analyzed life stages, the one presenting the lower number of shared genes is the egg. The results also reveal a set of SL-transcripts that are observed only in one stage of the life cycle and could represent transcripts that undergo stage-specific trans-splicing. Finally, we demonstrated that trans-splicing knockdown in sprocysts caused a reduction on the levels of all tested trans-spliced transcripts, but surprisingly the only phenotypic effect observed was a diminished larvae size. Financial support: CNPq, FAPEMIG
650 $aGene expression
650 $aSchistosoma Mansoni
653 $aExpressão gênica
700 1 $aBITAR, M. L.
700 1 $aLOBO, F. P.
700 1 $aGRYNBERG, P.
700 1 $aBORONI, M.
700 1 $aWAISBERG, M.
700 1 $aMACEDO, A. M.
700 1 $aMACHADO, C. R.
700 1 $aFRANCO, G. R.
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