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| Registros recuperados : 14 | |
| 5. |  | FASANELLA, C. C.; DIAS, A. C. F.; MELO, I. S. de; LUVIZOTTO, D.; PIZZIRANI-KLEINER, A. A.; DINI-ANDREOTE, F. Diversidade e funcionalidade fúngica na biorremediação de manguezais contaminados com petróleo. In: CONGRESSO BRASILEIRO DE MICROBIOLOGIA, 26., 2011, Foz do Iguaçu. Anais... Foz do Iguaçu: Sociedade Brasileira de Microbiologia, 2011. Resumo 417-1.| Biblioteca(s): Embrapa Meio Ambiente. |
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| 6. | | DIAS, A. C. F.; DINI-ANDREOTE, F.; TAKETANI, R. G.; TSAI, S. M.; AZEVEDO, J. L.; MELO, I. S. de; ANDREOTE, F. D. Archaeal communities in the sediments of three contrasting mangroves. Journal of Soils and Sediments, Berlin, v. 11, n. 8, p. 1466-1476, 2011.| Biblioteca(s): Embrapa Meio Ambiente. |
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| 7. | | SANTOS, S. N.; FERRARIS, F. K.; KAVAMURA, V.; TAKETANI, R. G.; LANÇONI, M. D.; DINI-ANDREOTE, F.; HENRRIQUES, M. das G. M. O.; MELO, I. S. de. Atividade antitumoral de biomoléculas obtidas de Fusarium oxysporum, um endofítico de Combretum leprosum, planta nativa do semiárido brasileiro. In: CONGRESSO BRASILEIRO DE MICROBIOLOGIA, 26., 2011, Foz do Iguaçu. Anais... Foz do Iguaçu: Sociedade Brasileira de Microbiologia, 2011. Resumo 1270-1.| Biblioteca(s): Embrapa Meio Ambiente. |
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| 8. | | MARCON, J.; TAKETANI, R. G.; DINI-ANDREOTE, F.; MAZZERO, G. I.; SOARES JUNIOR, F. L.; MELO, I. S. de; AZEVEDO, J. L.; ANDREOTE, F. D. Draft genome sequence of Bacillus thuringiensis strain BrMgv02-JM63, a chitinolytic bacterium isolated from oil-contaminated mangrove soil in Brazil. Genome Announcements, Washington DC, v. 2, n. 1, p. e01264-13, 2014.| Biblioteca(s): Embrapa Meio Ambiente. |
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| 9. | | DIAS, A. C. F.; ANDREOTE, F. D.; DINI-ANDREOTE, F.; LACAVA, P. T.; SÁ, A. L. B.; MELO, I. S. de; AZEVEDO, J. L.; ARAUJO, W. L. Diversity and biotechnological potential of culturable bacteria from Brazilian mangrove sediment. World Journal of Microbiology and Biotechnology, v. 25, n. 7, p. 1305-1311, 2009.| Biblioteca(s): Embrapa Meio Ambiente. |
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| 10. | | LIMA, A. B.; CANNAVAN, F. de S.; GERMANO, M. G.; DINI-ANDREOTE, F.; FRANCHINI, J. C.; PAULA, A. M. de; TEIXEIRA, W. G.; TSAI, S. M. Effects of vegetation and seasonality on bacterial communities in Amazonian dark earth and adjacent soils. African Journal of Microbiology Research, v. 9, n. 40, p. 2119-2134, Oct. 2015.| Biblioteca(s): Embrapa Solos. |
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| 11. | | MONTEIRO, D. A.; CUSTER, G. F.; MARTINS, L. F.; BALIEIRO, F. de C.; DINI-ANDREOTE, F.; RACHID, C. T. C. da C. Effects of soil type and salinity levels on the performance and bacteriome of the halophyte Atriplex nummularia (old man saltbush). Plant and Soil, v. 499, n. 1/2, p. 621-637, 2024.| Biblioteca(s): Embrapa Solos. |
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| 12. | | KAVAMURA, V. N.; SANTOS, S. N.; SÁBER, M. L.; SILVA, J. L. da; PARMA, M. M.; DINI-ANDREOTE, F.; MELO, I. S. de. Screening de bactérias tolerantes à seca associadas a cactáceas da Caatinga. In: CONGRESSO BRASILEIRO DE MICROBIOLOGIA, 26., 2011, Foz do Iguaçu. Anais... Foz do Iguaçu: Sociedade Brasileira de Microbiologia, 2011. Resumo 244-2.| Biblioteca(s): Embrapa Meio Ambiente. |
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| 13. | | DURRER, A.; LOPEZ, M. V.; DIAS, A. C. F.; FASANELLA, C. C.; TAKETANI, R. G.; MELO, I. S. de; DINI-ANDREOTE, F. The sulfur-processing community of mangroves under distinct historic of contamination in Brazil. In: CONGRESSO BRASILEIRO DE MICROBIOLOGIA, 26., 2011, Foz do Iguaçu. Anais... Foz do Iguaçu: Sociedade Brasileira de Microbiologia, 2011. Resumo 791-1.| Biblioteca(s): Embrapa Meio Ambiente. |
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| 14. | | ANDREOTE, F. D.; JIMENEZ, D. J.; CHAVES, D.; DIAS, A. C. F.; LUVIZOTTO, D. M.; DINI-ANDREOTE, F.; FASANELLA, C. C.; VARON LOPEZ, M.; BAENA, S.; TAKETANI, R. G.; MELO, I. S. de. The microbiome of brazilian mangrove sediments as revealed by metagenomics. Plos One, v. 7, n. 6, 14 p., 2012.| Biblioteca(s): Embrapa Meio Ambiente. |
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| Registros recuperados : 14 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Meio Ambiente. |
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Data corrente: |
21/12/2012 |
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Data da última atualização: |
21/12/2012 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
ANDREOTE, F. D.; JIMENEZ, D. J.; CHAVES, D.; DIAS, A. C. F.; LUVIZOTTO, D. M.; DINI-ANDREOTE, F.; FASANELLA, C. C.; VARON LOPEZ, M.; BAENA, S.; TAKETANI, R. G.; MELO, I. S. de. |
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Afiliação: |
FERNANDO DINI ANDREOTE, ESALQ-USP; DIEGO JAVIER JIMENEZ, Pontificia UNiversidad Javeriana; DIEOGO CHAVES, Colombian Center for Genomic and Bioinformatics from Extreme Environments; ARMANDO CAVALCANTE FRANCO DIAS, ESALQ-USP; DANICE MAZZER LUVIZOTTO, ESALQ-USP; FRANCISCO DINI-ANDREOTE, ESALQ-USP; CRISTIANE CIPOLA FASANELLA, ESALQ-USP; MARYEIMY VARON LOPEZ, ESALQ-USP; SANDRA BAENA, Pontificia Universidad Javeriana; RODRIGO GOUVÊA TAKETANI; ITAMAR SOARES DE MELO, CNPMA. |
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Título: |
The microbiome of brazilian mangrove sediments as revealed by metagenomics. |
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Ano de publicação: |
2012 |
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Fonte/Imprenta: |
Plos One, v. 7, n. 6, 14 p., 2012. |
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Idioma: |
Inglês |
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Conteúdo: |
ABSTRACT: Here we embark in a deep metagenomic survey that revealed the taxonomic and potential metabolic pathways aspects of mangrove sediment microbiology. The extraction of DNA from sediment samples and the direct application of pyrosequencing resulted in approximately 215 Mb of data from four distinct mangrove areas (BrMgv01 to 04) in Brazil. The taxonomic approaches applied revealed the dominance of Deltaproteobacteria and Gammaproteobacteria in the samples. Paired statistical analysis showed higher proportions of specific taxonomic groups in each dataset. The metabolic reconstruction indicated the possible occurrence of processes modulated by the prevailing conditions found in mangrove sediments. In terms of carbon cycling, the sequences indicated the prevalence of genes involved in the metabolism of methane, formaldehyde, and carbon dioxide. With respect to the nitrogen cycle, evidence for sequences associated with dissimilatory reduction of nitrate, nitrogen immobilization, and denitrification was detected. Sequences related to the production of adenylsulfate, sulfite, and H2S were relevant to the sulphur cycle. These data indicate that the microbial core involved in methane, nitrogen, and sulphur metabolism consists mainly of Burkholderiaceae, Planctomycetaceae, Rhodobacteraceae, and Desulfobacteraceae. Comparison of our data to datasets from soil and sea samples resulted in the allotment of the mangrove sediments between those samples. The results of this study add valuable data about the composition of microbial communities in mangroves and also shed light on possible transformations promoted by microbial organisms in mangrove sediments. MenosABSTRACT: Here we embark in a deep metagenomic survey that revealed the taxonomic and potential metabolic pathways aspects of mangrove sediment microbiology. The extraction of DNA from sediment samples and the direct application of pyrosequencing resulted in approximately 215 Mb of data from four distinct mangrove areas (BrMgv01 to 04) in Brazil. The taxonomic approaches applied revealed the dominance of Deltaproteobacteria and Gammaproteobacteria in the samples. Paired statistical analysis showed higher proportions of specific taxonomic groups in each dataset. The metabolic reconstruction indicated the possible occurrence of processes modulated by the prevailing conditions found in mangrove sediments. In terms of carbon cycling, the sequences indicated the prevalence of genes involved in the metabolism of methane, formaldehyde, and carbon dioxide. With respect to the nitrogen cycle, evidence for sequences associated with dissimilatory reduction of nitrate, nitrogen immobilization, and denitrification was detected. Sequences related to the production of adenylsulfate, sulfite, and H2S were relevant to the sulphur cycle. These data indicate that the microbial core involved in methane, nitrogen, and sulphur metabolism consists mainly of Burkholderiaceae, Planctomycetaceae, Rhodobacteraceae, and Desulfobacteraceae. Comparison of our data to datasets from soil and sea samples resulted in the allotment of the mangrove sediments between those samples. The results of this study add... Mostrar Tudo |
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Palavras-Chave: |
Metagenômica. |
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Thesagro: |
Bactéria; Mangue; Sedimento. |
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Thesaurus NAL: |
Delta-Proteobacteria; Gamma-Proteobacteria; Mangrove forests; Metagenomics; Sediments. |
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Categoria do assunto: |
S Ciências Biológicas |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/72747/1/2012AP59.pdf
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Marc: |
LEADER 02611naa a2200349 a 4500
001 1943451
005 2012-12-21
008 2012 bl uuuu u00u1 u #d
100 1 $aANDREOTE, F. D.
245 $aThe microbiome of brazilian mangrove sediments as revealed by metagenomics.$h[electronic resource]
260 $c2012
520 $aABSTRACT: Here we embark in a deep metagenomic survey that revealed the taxonomic and potential metabolic pathways aspects of mangrove sediment microbiology. The extraction of DNA from sediment samples and the direct application of pyrosequencing resulted in approximately 215 Mb of data from four distinct mangrove areas (BrMgv01 to 04) in Brazil. The taxonomic approaches applied revealed the dominance of Deltaproteobacteria and Gammaproteobacteria in the samples. Paired statistical analysis showed higher proportions of specific taxonomic groups in each dataset. The metabolic reconstruction indicated the possible occurrence of processes modulated by the prevailing conditions found in mangrove sediments. In terms of carbon cycling, the sequences indicated the prevalence of genes involved in the metabolism of methane, formaldehyde, and carbon dioxide. With respect to the nitrogen cycle, evidence for sequences associated with dissimilatory reduction of nitrate, nitrogen immobilization, and denitrification was detected. Sequences related to the production of adenylsulfate, sulfite, and H2S were relevant to the sulphur cycle. These data indicate that the microbial core involved in methane, nitrogen, and sulphur metabolism consists mainly of Burkholderiaceae, Planctomycetaceae, Rhodobacteraceae, and Desulfobacteraceae. Comparison of our data to datasets from soil and sea samples resulted in the allotment of the mangrove sediments between those samples. The results of this study add valuable data about the composition of microbial communities in mangroves and also shed light on possible transformations promoted by microbial organisms in mangrove sediments.
650 $aDelta-Proteobacteria
650 $aGamma-Proteobacteria
650 $aMangrove forests
650 $aMetagenomics
650 $aSediments
650 $aBactéria
650 $aMangue
650 $aSedimento
653 $aMetagenômica
700 1 $aJIMENEZ, D. J.
700 1 $aCHAVES, D.
700 1 $aDIAS, A. C. F.
700 1 $aLUVIZOTTO, D. M.
700 1 $aDINI-ANDREOTE, F.
700 1 $aFASANELLA, C. C.
700 1 $aVARON LOPEZ, M.
700 1 $aBAENA, S.
700 1 $aTAKETANI, R. G.
700 1 $aMELO, I. S. de
773 $tPlos One$gv. 7, n. 6, 14 p., 2012.
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Embrapa Meio Ambiente (CNPMA) |
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