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Registro Completo |
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Biblioteca(s): |
Embrapa Cerrados. |
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Data corrente: |
28/10/1994 |
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Data da última atualização: |
28/10/1994 |
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Autoria: |
SILVA, D. B. da; GOMES, A. C. |
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Título: |
Estudos de populacao de plantas para o trigo irrigado na regiao dos cerrados. |
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Ano de publicação: |
1991 |
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Fonte/Imprenta: |
In: EMBRAPA. Centro de Pesquisa Agropecuaria dos Cerrados (Planaltina, DF). Relatorio tecnico anual do Centro de Pesquisa Agropecuaria dos Cerrados 1985/1987. Planaltina, 1991. |
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Páginas: |
p.195-199. |
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Idioma: |
Português |
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Palavras-Chave: |
Cultura anual; Plant population; Wheats. |
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Thesagro: |
Cerrado; Irrigação; População de Planta; Trigo; Triticum Aestivum. |
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Thesaurus Nal: |
annuals; irrigation. |
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Categoria do assunto: |
-- |
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Marc: |
LEADER 00801naa a2200253 a 4500
001 1549549
005 1994-10-28
008 1991 bl uuuu u00u1 u #d
100 1 $aSILVA, D. B. da
245 $aEstudos de populacao de plantas para o trigo irrigado na regiao dos cerrados.
260 $c1991
300 $ap.195-199.
650 $aannuals
650 $airrigation
650 $aCerrado
650 $aIrrigação
650 $aPopulação de Planta
650 $aTrigo
650 $aTriticum Aestivum
653 $aCultura anual
653 $aPlant population
653 $aWheats
700 1 $aGOMES, A. C.
773 $tIn: EMBRAPA. Centro de Pesquisa Agropecuaria dos Cerrados (Planaltina, DF). Relatorio tecnico anual do Centro de Pesquisa Agropecuaria dos Cerrados 1985/1987. Planaltina, 1991.
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Registro original: |
Embrapa Cerrados (CPAC) |
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Registro Completo
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Biblioteca(s): |
Embrapa Pecuária Sudeste. |
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Data corrente: |
29/11/2019 |
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Data da última atualização: |
13/03/2023 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
BERNARDES; NASCIMENTO, G. B. do; SAVEGNAGO, R. P.; BUZANSKAS, M. E.; WATANABE, R. N.; REGITANO, L. C. de A.; COUTINHO, L. L.; GONDRO, C.; MUNARI, D. P. |
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Afiliação: |
Priscila Arrigucci Bernardes, UNESP; Guilherme Batista do Nascimento, Centro Universitário de Adamantina; Rodrigo Pelicioni Savegnago, Instituto de Zootecnia; Marcos Eli Buzanskas, Universidade Federal da Paraiba; Rafael Nakamura Watanabe, UNESP; LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE; Luiz Lehmann Coutinho, USP; Cedric Gondro, Michigan State University; Danísio Prado Munari, UNESP. |
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Título: |
Evaluation of imputation accuracy using the combination of two high-density panels in nelore beef cattle. |
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Ano de publicação: |
2019 |
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Fonte/Imprenta: |
Scientific Reports, v. 9, 17920, 2019. |
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DOI: |
doi.org/10.1038/s41598-019-54382-w |
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Idioma: |
Inglês |
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Conteúdo: |
this study compared imputation from lower-density commercial and customized panels to high-density panels and a combined panel (Illumina and Affymetrix) in Nelore beef cattle. Additionally, linkage disequilibrium and haplotype block conformation were estimated in individual high-density panels and compared with corresponding values in the combined panel after imputation. Overall, 814 animals were genotyped using BovineHD BeadChip (IllumHD), and 93 of these animals were also genotyped using the Axion Genome-Wide BOS 1 Array Plate (AffyHD). In general, customization considering linkage disequilibrium and minor allele frequency had the highest accuracies. The IllumHD panel had higher values of linkage disequilibrium for short distances between SNPs than AffyHD and the combined panel. The combined panel had an increased number of small haplotype blocks. The use of a combined panel is recommended due to its increased density and number of haplotype blocks, which in turn increase the probability of a marker being close to a quantitative trait locus of interest. Considering common SNPs between IllumHD and AffyHD for the customization of a low-density panel increases the imputation accuracy for IllumHD, AffyHD and the combined panel. |
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Thesagro: |
Bovino; Gado de Corte. |
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Thesaurus NAL: |
Animal breeding; Beef cattle. |
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Categoria do assunto: |
L Ciência Animal e Produtos de Origem Animal |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/205859/1/Arrigucci-et-al-2019EvaluationOfImputationAccuracy.pdf
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Marc: |
LEADER 02062naa a2200277 a 4500
001 2115563
005 2023-03-13
008 2019 bl uuuu u00u1 u #d
024 7 $adoi.org/10.1038/s41598-019-54382-w$2DOI
100 1 $aBERNARDES
245 $aEvaluation of imputation accuracy using the combination of two high-density panels in nelore beef cattle.$h[electronic resource]
260 $c2019
520 $athis study compared imputation from lower-density commercial and customized panels to high-density panels and a combined panel (Illumina and Affymetrix) in Nelore beef cattle. Additionally, linkage disequilibrium and haplotype block conformation were estimated in individual high-density panels and compared with corresponding values in the combined panel after imputation. Overall, 814 animals were genotyped using BovineHD BeadChip (IllumHD), and 93 of these animals were also genotyped using the Axion Genome-Wide BOS 1 Array Plate (AffyHD). In general, customization considering linkage disequilibrium and minor allele frequency had the highest accuracies. The IllumHD panel had higher values of linkage disequilibrium for short distances between SNPs than AffyHD and the combined panel. The combined panel had an increased number of small haplotype blocks. The use of a combined panel is recommended due to its increased density and number of haplotype blocks, which in turn increase the probability of a marker being close to a quantitative trait locus of interest. Considering common SNPs between IllumHD and AffyHD for the customization of a low-density panel increases the imputation accuracy for IllumHD, AffyHD and the combined panel.
650 $aAnimal breeding
650 $aBeef cattle
650 $aBovino
650 $aGado de Corte
700 1 $aNASCIMENTO, G. B. do
700 1 $aSAVEGNAGO, R. P.
700 1 $aBUZANSKAS, M. E.
700 1 $aWATANABE, R. N.
700 1 $aREGITANO, L. C. de A.
700 1 $aCOUTINHO, L. L.
700 1 $aGONDRO, C.
700 1 $aMUNARI, D. P.
773 $tScientific Reports$gv. 9, 17920, 2019.
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Registro original: |
Embrapa Pecuária Sudeste (CPPSE) |
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