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 | Acesso ao texto completo restrito à biblioteca da Embrapa Amazônia Ocidental. Para informações adicionais entre em contato com cpaa.biblioteca@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Amazônia Ocidental. |
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Data corrente: |
07/02/2024 |
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Data da última atualização: |
07/02/2024 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
ZUFFA, S.; SCHMID, R.; BAUERMEISTER, A.; GOMES, P. W. P.; CARABALLO-RODRIGUEZ, A. M.; EL ABIEAD, Y.; ARON, A. T.; GENTRY, E. C.; ZEMLIN, J.; MEEHAN, M. J.; AVALON, N. E.; CICHEWICZ, R. H.; BUZUN, E.; CARRILLO TERRAZAS, M.; HSU, C. Y.; OLES, R.; AYALA, A. V.; ZHAO, J.; CHU, H.; KUIJPERS, M. C. M.; JACKREL, S. L.; TUGIZIMANA, F.; NEPHALI, L. P.; DUBERY, I. A.; MADALA, N. E.; MOREIRA, E. A.; COSTA-LOTUFO, L. V.; LOPES, N. P.; REZENDE-TEIXEIRA, P.; JIMENEZ, P. C.; RIMAL, B.; PATTERSON, A. D.; TRAXLER, M. F.; PESSOTTI, R. de C.; ALVARADO-VILLALOBOS, D.; TAMAYO-CASTILLO, G.; CHAVERRI, P.; ESCUDERO-LEYVA, E.; QUIROS-GUERRERO, L. M.; BORY, A. J.; JOUBERT, J.; RUTZ, A.; WOLFENDER, J. L.; ALLARD, P. M.; SICHERT, A.; PONTRELLI, S.; PULLMAN, B. S.; BANDEIRA, N.; GERWICK, W. H.; GINDRO, K.; MASSANA-CODINA, J.; WAGNER, B. C.; FORCHHAMMER, K.; PETRAS, D.; AIOSA, N.; GARG, N.; LIEBEKE, M.; BOURCEAU, P.; KANG, K. B.; GADHAVI, H.; CARVALHO, L. P. S. de; SANTOS, M. S. dos; PÉREZ-LORENTE, A. I.; MOLINA-SANTIAGO, C.; ROMERO, D.; FRANKE, R.; BRÖNSTRUP, M.; PONCE DE LEÓN, A. V.; POPE, P. B.; LA ROSA, S. L.; LA BARBERA, G.; ROAGER, H. M.; LAURSEN, M. F.; HAMMERLE, F.; SIEWERT, B.; PEINTNER, U.; LICONA-CASSANI, C.; RODRIGUEZ-ORDUÑA, L.; RAMPLER, E.; HILDEBRAND, F.; KOELLENSPERGER, G.; SCHOENY, H.; HOHENWALLNER, K.; PANZENBOECK, L.; GREGOR, R.; O'NEILL, E. C.; ROXBOROUGH, E. T.; ODOI, J.; BALE, N. J.; DING, S.; DAMSTÉ, J. S. S.; GUAN, X. L.; CUI, J. J.; JU, K. S.; SILVA, D. B.; SILVA, F. M. R.; SILVA, G. F. da; KOOLEN, H. H. F.; GRUNDMANN, C.; CLEMENT, J. A.; MOHIMANI, H.; BRODERS, K.; McPHAIL, K. L.; OBER-SINGLETON, S. E.; RATH, C. M.; McDONALD, D.; KNIGHT, R.; WANG, M.; DORRESTEIN, P. C. |
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Afiliação: |
SIMONE ZUFFA, UNIVERSITY OF CALIFORNIA SAN DIEGO; ROBIN SCHMID, UNIVERSITY OF CALIFORNIA SAN DIEGO; ANELIZE BAUERMEISTER, UNIVERSITY OF CALIFORNIA SAN DIEGO; PAULO WENDER P. GOMES, UNIVERSITY OF CALIFORNIA SAN DIEGO; ANDRES M. CARABALLO-RODRIGUEZ, UNIVERSITY OF CALIFORNIA SAN DIEGO; YASIN EL ABIEAD, UNIVERSITY OF CALIFORNIA SAN DIEGO; ALLEGRA T. ARON, UNIVERSITY OF DENVER; EMILY C. GENTRY, DEPARTMENT OF CHEMISTRY, VIRGINIA TECH; JASMINE ZEMLIN, UNIVERSITY OF CALIFORNIA SAN DIEGO; MICHAEL J. MEEHAN, UNIVERSITY OF CALIFORNIA SAN DIEGO; NICOLE E. AVALON, UNIVERSITY OF CALIFORNIA SAN DIEGO; ROBERT H. CICHEWICZ, UNIVERSITY OF OKLAHOMA; EKATERINA BUZUN, UNIVERSITY OF CALIFORNIA SAN DIEGO; MARVIC CARRILLO TERRAZAS, UNIVERSITY OF CALIFORNIA SAN DIEGO; CHIA-YUN HSU, UNIVERSITY OF CALIFORNIA SAN DIEGO; RENEE OLES, UNIVERSITY OF CALIFORNIA SAN DIEGO; ADRIANA VASQUEZ AYALA, UNIVERSITY OF CALIFORNIA SAN DIEGO; JIAQI ZHAO, UNIVERSITY OF CALIFORNIA SAN DIEGO; HIUTUNG CHU, UNIVERSITY OF CALIFORNIA SAN DIEGO; MIRTE C. M. KUIJPERS, UNIVERSITY OF CALIFORNIA SAN DIEGO; SARA L. JACKREL, UNIVERSITY OF CALIFORNIA SAN DIEGO; FIDELE TUGIZIMANA, UNIVERSITY OF JOHANNESBURG; LERATO PERTUNIA NEPHALI, UNIVERSITY OF JOHANNESBURG; IAN A. DUBERY, UNIVERSITY OF JOHANNESBURG; NTAKADZENI EDWIN MADALA, UNIVERSITY OF VENDA; EDUARDA ANTUNES MOREIRA, UNIVERSIDADE DE SÃO PAULO; LETICIA VERAS COSTA-LOTUFO, UNIVERSIDADE DE SÃO PAULO; NORBERTO PEPORINE LOPES, UNIVERSIDADE DE SÃO PAULO; PAULA REZENDE-TEIXEIRA, UNIVERSIDADE DE SÃO PAULO; PAULA C. JIMENEZ, UNIVERSIDADE DE SÃO PAULO; BIPIN RIMAL, PENNSYLVANIA STATE UNIVERSITY; ANDREW D. PATTERSON, PENNSYLVANIA STATE UNIVERSITY; MATTHEW F. TRAXLER, UNIVERSITY OF CALIFORNIA BERKELEY; RITA DE CASSIA PESSOTTI, UNIVERSITY OF CALIFORNIA BERKELEY; DANIEL ALVARADO-VILLALOBOS, UNIVERSIDAD DE COSTA RICA; GISELLE TAMAYO-CASTILLO, UNIVERSIDAD DE COSTA RICA; PRISCILA CHAVERRI, UNIVERSIDAD DE COSTA RICA; EFRAIN ESCUDERO-LEYVA, UNIVERSIDAD DE COSTA RICA; LUIS-MANUEL QUIROS-GUERRERO, UNIVERSITY OF GENEVA; ALEXANDRE JEAN BORY, UNIVERSITY OF GENEVA; JULIETTE JOUBERT, UNIVERSITY OF GENEVA; ADRIANO RUTZ, UNIVERSITY OF GENEVA; JEAN-LUC WOLFENDER, UNIVERSITY OF GENEVA; PIERRE-MARIE ALLARD, UNIVERSITY OF GENEVA; ANDREAS SICHERT, INSTITUTE OF MOLECULAR SYSTEMS BIOLOGY; SAMMY PONTRELLI, INSTITUTE OF MOLECULAR SYSTEMS BIOLOGY; BENJAMIN S. PULLMAN, UNIVERSITY OF CALIFORNIA SAN DIEGO; NUNO BANDEIRA, UNIVERSITY OF CALIFORNIA SAN DIEGO; WILLIAM H. GERWICK, UNIVERSITY OF CALIFORNIA SAN DIEGO; KATIA GINDRO, PLANT PROTECTION, MYCOLOGY GROUP; JOSEP MASSANA-CODINA, PLANT PROTECTION, MYCOLOGY GROUP; BERENIKE C. WAGNER, UNIVERSITY OF TUEBINGEN; KARL FORCHHAMMER, UNIVERSITY OF TUEBINGEN; DANIEL PETRAS, UNIVERSITY OF TUEBINGEN; NICOLE AIOSA, GEORGIA INSTITUTE OF TECHNOLOGY; NEHA GARG, GEORGIA INSTITUTE OF TECHNOLOGY; MANUEL LIEBEKE, MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY; PATRIC BOURCEAU, MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY; KYO BIN KANG, SOOKMYUNG WOMEN’S UNIVERSITY; HENNA GADHAVI, THE FRANCIS CRICK INSTITUTE; LUIZ PEDRO SORIO DE CARVALHO, THE FRANCIS CRICK INSTITUTE; MARIANA SILVA DOS SANTOS, THE FRANCIS CRICK INSTITUTE; ALICIA ISABEL PÉREZ-LORENTE, UNIVERSIDAD DE MÁLAGA-CONSEJO SUPERIOR DE INVESTIGACIONES CIENTÍFICAS; CARLOS MOLINA-SANTIAGO, UNIVERSIDAD DE MÁLAGA-CONSEJO SUPERIOR DE INVESTIGACIONES CIENTÍFICAS; DIEGO ROMERO, UNIVERSIDAD DE MÁLAGA-CONSEJO SUPERIOR DE INVESTIGACIONES CIENTÍFICAS; RAIMO FRANKE, HELMHOLTZ CENTRE FOR INFECTION RESEARCH; MARK BRÖNSTRUP, HELMHOLTZ CENTRE FOR INFECTION RESEARCH; ARTURO VERA PONCE DE LEÓN, NORWEGIAN UNIVERSITY OF LIFE SCIENCES; PHILLIP BYRON POPE, NORWEGIAN UNIVERSITY OF LIFE SCIENCES; SABINA LEANTI LA ROSA, NORWEGIAN UNIVERSITY OF LIFE SCIENCES; GIORGIA LA BARBERA, UNIVERSITY OF COPENHAGEN; HENRIK M. ROAGER, UNIVERSITY OF COPENHAGEN; MARTIN FREDERIK LAURSEN, UNIVERSITY OF DENMARK; FABIAN HAMMERLE, UNIVERSITY OF INNSBRUCK; BIANKA SIEWERT, UNIVERSITY OF INNSBRUCK; URSULA PEINTNER, UNIVERSITY OF INNSBRUCK; CUAUHTEMOC LICONA-CASSANI, CENTRO DE BIOTECNOLOGÍA FEMSA, TECNOLOGICO DE MONTERREY; LORENA RODRIGUEZ-ORDUÑA, CENTRO DE BIOTECNOLOGÍA FEMSA, TECNOLOGICO DE MONTERREY; EVELYN RAMPLER, UNIVERSITY OF VIENNA; FELINA HILDEBRAND, UNIVERSITY OF VIENNA; GUNDA KOELLENSPERGER, UNIVERSITY OF VIENNA; HARALD SCHOENY, UNIVERSITY OF VIENNA; KATHARINA HOHENWALLNER, UNIVERSITY OF VIENNA; LISA PANZENBOECK, UNIVERSITY OF VIENNA; RACHEL GREGOR, MASSACHUSETTS INSTITUTE OF TECHNOLOGY; ELLIS CHARLES O'NEILL, UNIVERSITY OF NOTTINGHAM; EVE TALLULAH ROXBOROUGH, UNIVERSITY OF NOTTINGHAM; JANE ODOI, UNIVERSITY OF NOTTINGHAM; NICOLE J. BALE, NETHERLANDS INSTITUTE FOR SEA RESEARCH; SU DING, NETHERLANDS INSTITUTE FOR SEA RESEARCH; JAAP S. SINNINGHE DAMSTÉ, NETHERLANDS INSTITUTE FOR SEA RESEARCH; XUE LI GUAN, NANYANG TECHNOLOGICAL UNIVERSITY; JERRY J. CUI, THE OHIO STATE UNIVERSITY; KOU-SAN JU, THE OHIO STATE UNIVERSITY; DENISE BRENTAN SILVA, UNIVERSIDADE DO MATO GROSSO DO SUL; FERNANDA MOTTA RIBEIRO SILVA, UNIVERSIDADE DO MATO GROSSO DO SUL; GILVAN FERREIRA DA SILVA, CPAA; HECTOR H. F. KOOLEN, UNIVERSIDADE DO ESTADO DO AMAZONAS; CARLISMARI GRUNDMANN, UNIVERSIDADE DE SÃO PAULO; JASON A. CLEMENT, BARUCH S. BLUMBERG INSTITUTE; HOSEIN MOHIMANI, CARNEGIE MELLON UNIVERSITY; KIRK BRODERS, OREGON STATE UNIVERSITY; KERRY L. MCPHAIL, OREGON STATE UNIVERSITY; SIDNEE E. OBER-SINGLETON, UNIVERSITY OF OREGON; CHRISTOPHER M. RATH, UNIVERSITY OF CALIFORNIA SAN DIEGO; DANIEL MCDONALD, UNIVERSITY OF CALIFORNIA SAN DIEGO; ROB KNIGHT, UNIVERSITY OF CALIFORNIA SAN DIEGO; MINGXUN WANG, UNIVERSITY OF CALIFORNIA RIVERSIDE; PIETER C. DORRESTEIN, UNIVERSITY OF CALIFORNIA SAN DIEGO. |
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Título: |
MicrobeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data. |
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Ano de publicação: |
2024 |
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Fonte/Imprenta: |
Nature Microbiology, v. 9, p. 336-345, Feb. 2024. |
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DOI: |
https://doi.org/10.1038/s41564-023-01575-9 |
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Idioma: |
Inglês |
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Conteúdo: |
microbeMASST, a taxonomically informed mass spectrometry (MS) search tool, tackles limited microbial metabolite annotation in untargeted metabolomics experiments. Leveraging a curated database of >60,000 microbial monocultures, users can search known and unknown MS/MS spectra and link them to their respective microbial producers via MS/MS fragmentation patterns. Identifcation of microbe-derived metabolites and relative producers without a priori knowledge will vastly enhance the understanding of microorganisms' role in ecology and human health. |
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Palavras-Chave: |
Banco de dados; Ferramenta de pesquisa; Microbial. |
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Thesagro: |
Espectrometria. |
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Thesaurus Nal: |
Microorganisms. |
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Categoria do assunto: |
-- |
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Marc: |
LEADER 04475naa a2201489 a 4500
001 2161733
005 2024-02-07
008 2024 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.1038/s41564-023-01575-9$2DOI
100 1 $aZUFFA, S.
245 $aMicrobeMASST$ba taxonomically informed mass spectrometry search tool for microbial metabolomics data.$h[electronic resource]
260 $c2024
520 $amicrobeMASST, a taxonomically informed mass spectrometry (MS) search tool, tackles limited microbial metabolite annotation in untargeted metabolomics experiments. Leveraging a curated database of >60,000 microbial monocultures, users can search known and unknown MS/MS spectra and link them to their respective microbial producers via MS/MS fragmentation patterns. Identifcation of microbe-derived metabolites and relative producers without a priori knowledge will vastly enhance the understanding of microorganisms' role in ecology and human health.
650 $aMicroorganisms
650 $aEspectrometria
653 $aBanco de dados
653 $aFerramenta de pesquisa
653 $aMicrobial
700 1 $aSCHMID, R.
700 1 $aBAUERMEISTER, A.
700 1 $aGOMES, P. W. P.
700 1 $aCARABALLO-RODRIGUEZ, A. M.
700 1 $aEL ABIEAD, Y.
700 1 $aARON, A. T.
700 1 $aGENTRY, E. C.
700 1 $aZEMLIN, J.
700 1 $aMEEHAN, M. J.
700 1 $aAVALON, N. E.
700 1 $aCICHEWICZ, R. H.
700 1 $aBUZUN, E.
700 1 $aCARRILLO TERRAZAS, M.
700 1 $aHSU, C. Y.
700 1 $aOLES, R.
700 1 $aAYALA, A. V.
700 1 $aZHAO, J.
700 1 $aCHU, H.
700 1 $aKUIJPERS, M. C. M.
700 1 $aJACKREL, S. L.
700 1 $aTUGIZIMANA, F.
700 1 $aNEPHALI, L. P.
700 1 $aDUBERY, I. A.
700 1 $aMADALA, N. E.
700 1 $aMOREIRA, E. A.
700 1 $aCOSTA-LOTUFO, L. V.
700 1 $aLOPES, N. P.
700 1 $aREZENDE-TEIXEIRA, P.
700 1 $aJIMENEZ, P. C.
700 1 $aRIMAL, B.
700 1 $aPATTERSON, A. D.
700 1 $aTRAXLER, M. F.
700 1 $aPESSOTTI, R. de C.
700 1 $aALVARADO-VILLALOBOS, D.
700 1 $aTAMAYO-CASTILLO, G.
700 1 $aCHAVERRI, P.
700 1 $aESCUDERO-LEYVA, E.
700 1 $aQUIROS-GUERRERO, L. M.
700 1 $aBORY, A. J.
700 1 $aJOUBERT, J.
700 1 $aRUTZ, A.
700 1 $aWOLFENDER, J. L.
700 1 $aALLARD, P. M.
700 1 $aSICHERT, A.
700 1 $aPONTRELLI, S.
700 1 $aPULLMAN, B. S.
700 1 $aBANDEIRA, N.
700 1 $aGERWICK, W. H.
700 1 $aGINDRO, K.
700 1 $aMASSANA-CODINA, J.
700 1 $aWAGNER, B. C.
700 1 $aFORCHHAMMER, K.
700 1 $aPETRAS, D.
700 1 $aAIOSA, N.
700 1 $aGARG, N.
700 1 $aLIEBEKE, M.
700 1 $aBOURCEAU, P.
700 1 $aKANG, K. B.
700 1 $aGADHAVI, H.
700 1 $aCARVALHO, L. P. S. de
700 1 $aSANTOS, M. S. dos
700 1 $aPÉREZ-LORENTE, A. I.
700 1 $aMOLINA-SANTIAGO, C.
700 1 $aROMERO, D.
700 1 $aFRANKE, R.
700 1 $aBRÖNSTRUP, M.
700 1 $aPONCE DE LEÓN, A. V.
700 1 $aPOPE, P. B.
700 1 $aLA ROSA, S. L.
700 1 $aLA BARBERA, G.
700 1 $aROAGER, H. M.
700 1 $aLAURSEN, M. F.
700 1 $aHAMMERLE, F.
700 1 $aSIEWERT, B.
700 1 $aPEINTNER, U.
700 1 $aLICONA-CASSANI, C.
700 1 $aRODRIGUEZ-ORDUÑA, L.
700 1 $aRAMPLER, E.
700 1 $aHILDEBRAND, F.
700 1 $aKOELLENSPERGER, G.
700 1 $aSCHOENY, H.
700 1 $aHOHENWALLNER, K.
700 1 $aPANZENBOECK, L.
700 1 $aGREGOR, R.
700 1 $aO'NEILL, E. C.
700 1 $aROXBOROUGH, E. T.
700 1 $aODOI, J.
700 1 $aBALE, N. J.
700 1 $aDING, S.
700 1 $aDAMSTÉ, J. S. S.
700 1 $aGUAN, X. L.
700 1 $aCUI, J. J.
700 1 $aJU, K. S.
700 1 $aSILVA, D. B.
700 1 $aSILVA, F. M. R.
700 1 $aSILVA, G. F. da
700 1 $aKOOLEN, H. H. F.
700 1 $aGRUNDMANN, C.
700 1 $aCLEMENT, J. A.
700 1 $aMOHIMANI, H.
700 1 $aBRODERS, K.
700 1 $aMcPHAIL, K. L.
700 1 $aOBER-SINGLETON, S. E.
700 1 $aRATH, C. M.
700 1 $aMcDONALD, D.
700 1 $aKNIGHT, R.
700 1 $aWANG, M.
700 1 $aDORRESTEIN, P. C.
773 $tNature Microbiology$gv. 9, p. 336-345, Feb. 2024.
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Registro original: |
Embrapa Amazônia Ocidental (CPAA) |
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Biblioteca |
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Origem |
Tipo/Formato |
Classificação |
Cutter |
Registro |
Volume |
Status |
URL |
Voltar
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Registro Completo
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Biblioteca(s): |
Embrapa Pantanal. |
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Data corrente: |
17/09/2007 |
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Data da última atualização: |
29/01/2018 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
Internacional - C |
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Autoria: |
LEITE, K. C. E.; COLLEVATTI, R. G.; MENEGASSO, T. R.; TOMAS, W. M.; DUARTE, J. M. L. |
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Afiliação: |
K. C. E. Leite, Universidade Católica de Brasília; R. G. Collevatti, Universidade Católica de Brasília; T. R. Menegasso, Universidade Estadual Paulista; Walfrido Moraes Tomas, Embrapa Pantanal; J. M. B. Duarte, Universidade Estadual Paulista. |
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Título: |
Transferability of microsatellite loci from Cervidae species to the endangered Brazilian marsh deer, Blastocerus dichotomus. |
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Ano de publicação: |
2007 |
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Fonte/Imprenta: |
Genetics and Molecular Research, v.6, n.2, p.325-330, 2007. |
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Idioma: |
Inglês |
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Conteúdo: |
Blastocerus dichotomus, the marsh deer, is the largest Brazilian Cervidae species. The species is endangered because of hunting and loss of its natural habitat, i.e., flood plain areas, because of hydroeletric power station construction and agricultural land expansion. In the present study we tested 38 microsatellite loci from four Cervidae species: Odocoileus virginianus (7), Rangifer tarandus (17), Capreolus capreolus (7), and Mazama bororo (7). Eleven loci showed clear amplification, opening a new perspective for the generation of fundamental population genetic data dor devising conservation strategies for B. dichtomus. |
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Thesagro: |
Blastocerus Dichotomus. |
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Thesaurus NAL: |
Cervidae. |
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Categoria do assunto: |
L Ciência Animal e Produtos de Origem Animal |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/171785/1/Tomas.pdf
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Marc: |
LEADER 01255naa a2200193 a 4500
001 1812435
005 2018-01-29
008 2007 bl uuuu u00u1 u #d
100 1 $aLEITE, K. C. E.
245 $aTransferability of microsatellite loci from Cervidae species to the endangered Brazilian marsh deer, Blastocerus dichotomus.$h[electronic resource]
260 $c2007
520 $aBlastocerus dichotomus, the marsh deer, is the largest Brazilian Cervidae species. The species is endangered because of hunting and loss of its natural habitat, i.e., flood plain areas, because of hydroeletric power station construction and agricultural land expansion. In the present study we tested 38 microsatellite loci from four Cervidae species: Odocoileus virginianus (7), Rangifer tarandus (17), Capreolus capreolus (7), and Mazama bororo (7). Eleven loci showed clear amplification, opening a new perspective for the generation of fundamental population genetic data dor devising conservation strategies for B. dichtomus.
650 $aCervidae
650 $aBlastocerus Dichotomus
700 1 $aCOLLEVATTI, R. G.
700 1 $aMENEGASSO, T. R.
700 1 $aTOMAS, W. M.
700 1 $aDUARTE, J. M. L.
773 $tGenetics and Molecular Research$gv.6, n.2, p.325-330, 2007.
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Embrapa Pantanal (CPAP) |
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