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Registro Completo |
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Biblioteca(s): |
Embrapa Mandioca e Fruticultura. |
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Data corrente: |
30/03/2009 |
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Data da última atualização: |
20/01/2011 |
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Tipo da produção científica: |
Resumo em Anais de Congresso |
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Autoria: |
MACHADO, M. A.; AMARAL, A. M. do; BASTIANEL, M.; BOSCARIOL-CAMARGO, R. L.; CARLOS, E. F.; DELLA COLETTA FILHO, H.; CRISTOFANI-YALY, M.; FREITAS-ASTÚA, J.; LOCALI-FABRIS, E. C.; NOVELLI, V. M.; PERONI, L. A.; SILVA-PINHATI, A. C.; SOUZA, A. A.; STACH-MACHADO, D. R.; TAKITA, M. A.; TARGON, M. L. P. N.; REIS, M. da S. |
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Afiliação: |
Marcos Antonio Machado, APTA; Alexandre Morais do Amaral, APTA -CENARGEN; Marines Bastianel, APTA; Raquel Luciana Boscariol-Camargo, APTA; Eduardo Fermino Carlos, APTA; Helvecio Della Coletta Filho, APTA; Mariangela Cristofani-Yaly, APTA; Juliana Freitas-Ástua, CNPMF; Eliane Cristina Locali-Fabris, APTA; Valdenice Moreira Novelli, APTA; Luis Antonio Peroni, UNICAMP; Ana Carla Silva-Pinhati, APTA; Alessandra Alves Souza, APTA; Dagmar Ruth Stach-Machado, UNICAMP; Marco Aurélio Takita, APTA; Maria Luisa PN Targon, APTA; Marcelo da Silva Reis, APTA. |
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Título: |
Expressed citrus sequence (CitEST) database in Brazil: features and tools. |
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Ano de publicação: |
2008 |
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Fonte/Imprenta: |
In: THE INTERNATIONAL CONFERENCE ON THE STATUS OF PLANT & ANIMAL GENOME RESEARCH, 16., 2008, San Diego. Final abstracts guide. San Diego: Illumina, 2008. |
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Idioma: |
Inglês |
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Notas: |
W105 |
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Conteúdo: |
In a network effort of sequencing and annotation by several laboratories, the citrus ESTs database (CitEST) was concluded in 2007 in Brazil. The database include over than 280.000 ESTs of sweet orange (126.660), mandarin (59.484), Poncirus trifoliata (38.976), rangpur lime (15.455), sour orange (9. 600), Tahiti lime (9.600), key lime (9.600), and Sunki mandarin (7.584). The libraries were constructed with tissues under stress conditions aiming to increase the probability to sequence genes expressed in response of pathogenes or water stress. Besides survey of expressed genes of different citrus species, the project had the goal to estabilish molecular marker based on expressed sequences supporting genetic mapping approaches. The assembled and annotated sequences of all species include more than 90.000 unigenes, which has been extensively compared within the set and with other species. The tools available in the database include UniGene Editor, in silico hybridization (Northem digital), analysis of codon usage and single sequence repeats, comparative genomes features, clustering using gene ontology, MIPS and Pfam. All the services and informations will be available at http://biotecnologia.centrodecitricultura.br. |
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Thesagro: |
Fruta Cítrica; Gene. |
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Categoria do assunto: |
-- |
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Marc: |
LEADER 02300naa a2200349 a 4500
001 1655632
005 2011-01-20
008 2008 bl --- 0-- u #d
100 1 $aMACHADO, M. A.
245 $aExpressed citrus sequence (CitEST) database in Brazil$bfeatures and tools.
260 $c2008
500 $aW105
520 $aIn a network effort of sequencing and annotation by several laboratories, the citrus ESTs database (CitEST) was concluded in 2007 in Brazil. The database include over than 280.000 ESTs of sweet orange (126.660), mandarin (59.484), Poncirus trifoliata (38.976), rangpur lime (15.455), sour orange (9. 600), Tahiti lime (9.600), key lime (9.600), and Sunki mandarin (7.584). The libraries were constructed with tissues under stress conditions aiming to increase the probability to sequence genes expressed in response of pathogenes or water stress. Besides survey of expressed genes of different citrus species, the project had the goal to estabilish molecular marker based on expressed sequences supporting genetic mapping approaches. The assembled and annotated sequences of all species include more than 90.000 unigenes, which has been extensively compared within the set and with other species. The tools available in the database include UniGene Editor, in silico hybridization (Northem digital), analysis of codon usage and single sequence repeats, comparative genomes features, clustering using gene ontology, MIPS and Pfam. All the services and informations will be available at http://biotecnologia.centrodecitricultura.br.
650 $aFruta Cítrica
650 $aGene
700 1 $aAMARAL, A. M. do
700 1 $aBASTIANEL, M.
700 1 $aBOSCARIOL-CAMARGO, R. L.
700 1 $aCARLOS, E. F.
700 1 $aDELLA COLETTA FILHO, H.
700 1 $aCRISTOFANI-YALY, M.
700 1 $aFREITAS-ASTÚA, J.
700 1 $aLOCALI-FABRIS, E. C.
700 1 $aNOVELLI, V. M.
700 1 $aPERONI, L. A.
700 1 $aSILVA-PINHATI, A. C.
700 1 $aSOUZA, A. A.
700 1 $aSTACH-MACHADO, D. R.
700 1 $aTAKITA, M. A.
700 1 $aTARGON, M. L. P. N.
700 1 $aREIS, M. da S.
773 $tIn: THE INTERNATIONAL CONFERENCE ON THE STATUS OF PLANT & ANIMAL GENOME RESEARCH, 16., 2008, San Diego. Final abstracts guide. San Diego: Illumina, 2008.
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Registro original: |
Embrapa Mandioca e Fruticultura (CNPMF) |
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| Registros recuperados : 3 | |
| 3. |  | MACHADO, M. A.; AMARAL, A. M. do; BASTIANEL, M.; BOSCARIOL-CAMARGO, R. L.; CARLOS, E. F.; DELLA COLETTA FILHO, H.; CRISTOFANI-YALY, M.; FREITAS-ASTÚA, J.; LOCALI-FABRIS, E. C.; NOVELLI, V. M.; PERONI, L. A.; SILVA-PINHATI, A. C.; SOUZA, A. A.; STACH-MACHADO, D. R.; TAKITA, M. A.; TARGON, M. L. P. N.; REIS, M. da S. Expressed citrus sequence (CitEST) database in Brazil: features and tools. In: THE INTERNATIONAL CONFERENCE ON THE STATUS OF PLANT & ANIMAL GENOME RESEARCH, 16., 2008, San Diego. Final abstracts guide. San Diego: Illumina, 2008. W105| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Mandioca e Fruticultura. |
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| Registros recuperados : 3 | |
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| Nenhum registro encontrado para a expressão de busca informada. |
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