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Registro Completo |
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Biblioteca(s): |
Embrapa Mandioca e Fruticultura. |
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Data corrente: |
16/11/2021 |
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Data da última atualização: |
16/11/2021 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
CHABI-JESUS, C.; RAMOS-GONZÁLEZ, P. L.; POSTCLAM-BARRO, M.; FONTENELE, RA. S.; HARAKAVA, R.; BASSANEZI, R. B.; MOREIRA, A. S.; KITAJIMA, E. W.; VARSANI, A.; ASTUA, J. de F. |
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Afiliação: |
CAMILA CHABI-JESUS, ESALQ; PEDRO L. RAMOS-GONZÁLEZ, Instituto Biológico/IB; MATHEUS POSTCLAM-BARRO, Instituto Biológico/IB; RAFAELA SALGADO FONTENELE, Arizona State University; RICARDO HARAKAVA, Instituto Biológico/IB; RENATO B. BASSANEZI, Fundo de Defesa da Citricultura; ALECIO SOUZA MOREIRA, CNPMF; ELLIOT W. KITAJIMA, Instituto Biológico/IB; ARVIND VARSANI, Arizona State University; JULIANA DE FREITAS ASTUA, CNPMF. |
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Título: |
Molecular epidemiology of Citrus Leprosis Virus C: a new viral lineage and phylodynamic of the main viral subpopulations in the Americas. |
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Ano de publicação: |
2021 |
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Fonte/Imprenta: |
Frontiers in Microbiology, V. 12, 2021. |
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Idioma: |
Inglês |
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Conteúdo: |
Despite the importance of viral strains/variants as agents of emerging diseases, genetic and evolutionary processes affecting their ecology are not fully understood. To get insight into this topic, we assessed the population and spatial dynamic parameters of citrus leprosis virus C (CiLV-C, genus Cilevirus, family Kitaviridae). CiLV-C is the etiological agent of citrus leprosis disease, a non-systemic infection considered the main viral disorder affecting citrus orchards in Brazil. Overall, we obtained 18 complete or near-complete viral genomes, 123 complete nucleotide sequences of the open reading frame (ORF) encoding the putative coat protein, and 204 partial nucleotide sequences of the ORF encoding the movement protein, from 430 infected Citrus spp. samples collected between 1932 and 2020. A thorough examination of the collected dataset suggested that the CiLV-C population consists of the major lineages CRD and SJP, unevenly distributed, plus a third one called ASU identified in this work, which is represented by a single isolate found in an herbarium sample collected in Asuncion, Paraguay, in 1937. Viruses from the three lineages share about 85% nucleotide sequence identity and show signs of inter-clade recombination events. Members of the lineage CRD were identified both in commercial and non-commercial citrus orchards. However, those of the lineages SJP were exclusively detected in samples collected in the citrus belt of São Paulo and Minas Gerais, the leading Brazilian citrus production region, after 2015. The most recent common ancestor of viruses of the three lineages dates back to, at least, ?1500 years ago. Since citrus plants were introduced in the Americas by the Portuguese around the 1520s, the Bayesian phylodynamic analysis suggested that the ancestors of the main CiLV-C lineages likely originated in contact with native vegetation of South America. The intensive expansion of CRD and SJP lineages in Brazil started probably linked to the beginning of the local citrus industry. The high prevalence of CiLV-C in the citrus belt of Brazil likely ensues from the intensive connectivity between orchards, which represents a potential risk toward pathogen saturation across the region. MenosDespite the importance of viral strains/variants as agents of emerging diseases, genetic and evolutionary processes affecting their ecology are not fully understood. To get insight into this topic, we assessed the population and spatial dynamic parameters of citrus leprosis virus C (CiLV-C, genus Cilevirus, family Kitaviridae). CiLV-C is the etiological agent of citrus leprosis disease, a non-systemic infection considered the main viral disorder affecting citrus orchards in Brazil. Overall, we obtained 18 complete or near-complete viral genomes, 123 complete nucleotide sequences of the open reading frame (ORF) encoding the putative coat protein, and 204 partial nucleotide sequences of the ORF encoding the movement protein, from 430 infected Citrus spp. samples collected between 1932 and 2020. A thorough examination of the collected dataset suggested that the CiLV-C population consists of the major lineages CRD and SJP, unevenly distributed, plus a third one called ASU identified in this work, which is represented by a single isolate found in an herbarium sample collected in Asuncion, Paraguay, in 1937. Viruses from the three lineages share about 85% nucleotide sequence identity and show signs of inter-clade recombination events. Members of the lineage CRD were identified both in commercial and non-commercial citrus orchards. However, those of the lineages SJP were exclusively detected in samples collected in the citrus belt of São Paulo and Minas Gerais, the leading Brazilia... Mostrar Tudo |
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Thesaurus Nal: |
Cilevirus; Citrus leprosis virus C; Plant diseases and disorders. |
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Categoria do assunto: |
-- |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/227810/1/fmicb-12-641252.pdf
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Marc: |
LEADER 03057naa a2200265 a 4500
001 2136190
005 2021-11-16
008 2021 bl uuuu u00u1 u #d
100 1 $aCHABI-JESUS, C.
245 $aMolecular epidemiology of Citrus Leprosis Virus C$ba new viral lineage and phylodynamic of the main viral subpopulations in the Americas.$h[electronic resource]
260 $c2021
520 $aDespite the importance of viral strains/variants as agents of emerging diseases, genetic and evolutionary processes affecting their ecology are not fully understood. To get insight into this topic, we assessed the population and spatial dynamic parameters of citrus leprosis virus C (CiLV-C, genus Cilevirus, family Kitaviridae). CiLV-C is the etiological agent of citrus leprosis disease, a non-systemic infection considered the main viral disorder affecting citrus orchards in Brazil. Overall, we obtained 18 complete or near-complete viral genomes, 123 complete nucleotide sequences of the open reading frame (ORF) encoding the putative coat protein, and 204 partial nucleotide sequences of the ORF encoding the movement protein, from 430 infected Citrus spp. samples collected between 1932 and 2020. A thorough examination of the collected dataset suggested that the CiLV-C population consists of the major lineages CRD and SJP, unevenly distributed, plus a third one called ASU identified in this work, which is represented by a single isolate found in an herbarium sample collected in Asuncion, Paraguay, in 1937. Viruses from the three lineages share about 85% nucleotide sequence identity and show signs of inter-clade recombination events. Members of the lineage CRD were identified both in commercial and non-commercial citrus orchards. However, those of the lineages SJP were exclusively detected in samples collected in the citrus belt of São Paulo and Minas Gerais, the leading Brazilian citrus production region, after 2015. The most recent common ancestor of viruses of the three lineages dates back to, at least, ?1500 years ago. Since citrus plants were introduced in the Americas by the Portuguese around the 1520s, the Bayesian phylodynamic analysis suggested that the ancestors of the main CiLV-C lineages likely originated in contact with native vegetation of South America. The intensive expansion of CRD and SJP lineages in Brazil started probably linked to the beginning of the local citrus industry. The high prevalence of CiLV-C in the citrus belt of Brazil likely ensues from the intensive connectivity between orchards, which represents a potential risk toward pathogen saturation across the region.
650 $aCilevirus
650 $aCitrus leprosis virus C
650 $aPlant diseases and disorders
700 1 $aRAMOS-GONZÁLEZ, P. L.
700 1 $aPOSTCLAM-BARRO, M.
700 1 $aFONTENELE, RA. S.
700 1 $aHARAKAVA, R.
700 1 $aBASSANEZI, R. B.
700 1 $aMOREIRA, A. S.
700 1 $aKITAJIMA, E. W.
700 1 $aVARSANI, A.
700 1 $aASTUA, J. de F.
773 $tFrontiers in Microbiology, V. 12, 2021.
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Embrapa Mandioca e Fruticultura (CNPMF) |
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| 1. |  | CHABI-JESUS, C.; RAMOS-GONZÁLEZ, P. L.; POSTCLAM-BARRO, M.; FONTENELE, RA. S.; HARAKAVA, R.; BASSANEZI, R. B.; MOREIRA, A. S.; KITAJIMA, E. W.; VARSANI, A.; ASTUA, J. de F. Molecular epidemiology of Citrus Leprosis Virus C: a new viral lineage and phylodynamic of the main viral subpopulations in the Americas. Frontiers in Microbiology, V. 12, 2021.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
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