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Registro Completo |
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Biblioteca(s): |
Embrapa Agricultura Digital. |
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Data corrente: |
09/02/2011 |
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Data da última atualização: |
24/01/2020 |
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Tipo da produção científica: |
Resumo em Anais de Congresso |
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Autoria: |
NESHICH, G. |
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Afiliação: |
GORAN NESHICH, CNPTIA. |
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Título: |
Multiple Structures - Selected Parameter (MSSP) 2D Plot. |
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Ano de publicação: |
2010 |
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Fonte/Imprenta: |
In: EMBO WORKSHOP ON VISUALIZING BIOLOGICAL DATA, 2010, Germany. Posters. |
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Páginas: |
2 p. |
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Idioma: |
Inglês |
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Notas: |
T25. VIZBI 2010. |
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Conteúdo: |
The Multiple Structures - Single Parameter 2D module allows a user to compare, in a simple yet intuitive 2D plot, any one of the 150 different sequence, structure, function and stability parameters / descriptors, stored in STING_DB, for any protein structure deposited in the PDB. The 2D plot shows (for a selected parameter / descriptor) the numerical values in the Y-axis and the sequence residue numbers for structurally aligned proteins, in the X-axis. The MSSP module is a part of the improved Blue Star STING protein structure analysis computer interface and DB (which contains per-residue-reported descriptors (available for display both numerically and graphically) for either the public protein data base (the PDB)) or local files. The MSSP allows a user to select a parameter and to compare its values at corresponding 3d location in structurally aligned proteins. As a consequence, a user may observe / compare characteristics of nano-environment within macromolecular 3D constellation. A user may also evaluate how good is the 3D alignment based on synchrony in physical chemical characteristics of corresponding 3D locations in proteins previously aligned structurally. http://www.cbi.cnptia.embrapa.br/SMS/ |
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Palavras-Chave: |
Estrutura de proteínas; Sting. |
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Thesaurus Nal: |
Protein structure. |
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Categoria do assunto: |
X Pesquisa, Tecnologia e Engenharia |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/32525/1/t25.pdf
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Marc: |
LEADER 01729nam a2200169 a 4500
001 1876488
005 2020-01-24
008 2010 bl uuuu u00u1 u #d
100 1 $aNESHICH, G.
245 $aMultiple Structures - Selected Parameter (MSSP) 2D Plot.$h[electronic resource]
260 $aIn: EMBO WORKSHOP ON VISUALIZING BIOLOGICAL DATA, 2010, Germany. Posters.$c2010
300 $a2 p.
500 $aT25. VIZBI 2010.
520 $aThe Multiple Structures - Single Parameter 2D module allows a user to compare, in a simple yet intuitive 2D plot, any one of the 150 different sequence, structure, function and stability parameters / descriptors, stored in STING_DB, for any protein structure deposited in the PDB. The 2D plot shows (for a selected parameter / descriptor) the numerical values in the Y-axis and the sequence residue numbers for structurally aligned proteins, in the X-axis. The MSSP module is a part of the improved Blue Star STING protein structure analysis computer interface and DB (which contains per-residue-reported descriptors (available for display both numerically and graphically) for either the public protein data base (the PDB)) or local files. The MSSP allows a user to select a parameter and to compare its values at corresponding 3d location in structurally aligned proteins. As a consequence, a user may observe / compare characteristics of nano-environment within macromolecular 3D constellation. A user may also evaluate how good is the 3D alignment based on synchrony in physical chemical characteristics of corresponding 3D locations in proteins previously aligned structurally. http://www.cbi.cnptia.embrapa.br/SMS/
650 $aProtein structure
653 $aEstrutura de proteínas
653 $aSting
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Embrapa Agricultura Digital (CNPTIA) |
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