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Registro Completo |
Biblioteca(s): |
Embrapa Gado de Leite. |
Data corrente: |
24/01/2015 |
Data da última atualização: |
05/02/2024 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Autoria: |
O'BRIEN, A. M. P.; UTSUNOMIYA, Y. T.; MÉSZÁROS, G.; BICKHART, D. M.; LIU, G. E.; TASSEL, C. P. V.; SONSTEGARD, T. S.; SILVA, M. V. G. B.; GARCIA, J. F.; SÖLKNER, J. |
Afiliação: |
ANA M. PÉREZ O'BRIEN, University of Natural Resources and Life Sciences, Vienna; YURI T. UTSUNOMIYA, UNESP; GÁBOR MÉSZÁROS, University of Natural Resources and Life Sciences, Vienna; DEREK M BICKHART, ARS-USDA, USA; GEORGE E. LIU, ARS-USDA, USA; CURTIS P. VAN TASSEL, ARS-USDA, USA; TAD S. SONSTEGARD, ARS-USDA, USA; MARCOS VINICIUS GUALBERTO B SILVA, CNPGL; JOSÉ F. GARCIA, UNESP; JOHANN SÖLKNER, University of Natural Resources and Life Sciences, Vienna. |
Título: |
Assessing signatures of selection through variation in linkage disequilibrium between taurine and indicine cattle. |
Ano de publicação: |
2014 |
Fonte/Imprenta: |
Genetics Selection Evolution, v. 46, n. 19, 2014. |
Páginas: |
14 p. |
Idioma: |
Inglês |
Conteúdo: |
Signatures of selection are regions in the genome that have been preferentially increased in frequency and fixed in a population because of their functional importance in specific processes. These regions can be detected because of their lower genetic variability and specific regional linkage disequilibrium (LD) patterns. By comparing the differences in regional LD variation between dairy and beef cattle types, and between indicine and taurine subspecies, we aim at finding signatures of selection for production and adaptation in cattle breeds. The VarLD method was applied to compare the LD variation in the autosomal genome between breeds, including Angus and Brown Swiss, representing taurine breeds, and Nelore and Gir, representing indicine breeds. The conclusions are that VarLD method is a powerful tool to identify differences in linkage disequilibrium between cattle populations and putative signatures of selection with potential adaptive and productive importance. |
Palavras-Chave: |
Indicine; Minor allele frequency. |
Thesaurus Nal: |
Genetic improvement; Linkage disequilibrium; Taurine. |
Categoria do assunto: |
G Melhoramento Genético |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/116426/1/Cnpgl-2014-Genetics-Selection-Evolution-Assessing-signatures-of-selection.pdf
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Marc: |
LEADER 01864naa a2200301 a 4500 001 2006605 005 2024-02-05 008 2014 bl uuuu u00u1 u #d 100 1 $aO'BRIEN, A. M. P. 245 $aAssessing signatures of selection through variation in linkage disequilibrium between taurine and indicine cattle.$h[electronic resource] 260 $c2014 300 $a14 p. 520 $aSignatures of selection are regions in the genome that have been preferentially increased in frequency and fixed in a population because of their functional importance in specific processes. These regions can be detected because of their lower genetic variability and specific regional linkage disequilibrium (LD) patterns. By comparing the differences in regional LD variation between dairy and beef cattle types, and between indicine and taurine subspecies, we aim at finding signatures of selection for production and adaptation in cattle breeds. The VarLD method was applied to compare the LD variation in the autosomal genome between breeds, including Angus and Brown Swiss, representing taurine breeds, and Nelore and Gir, representing indicine breeds. The conclusions are that VarLD method is a powerful tool to identify differences in linkage disequilibrium between cattle populations and putative signatures of selection with potential adaptive and productive importance. 650 $aGenetic improvement 650 $aLinkage disequilibrium 650 $aTaurine 653 $aIndicine 653 $aMinor allele frequency 700 1 $aUTSUNOMIYA, Y. T. 700 1 $aMÉSZÁROS, G. 700 1 $aBICKHART, D. M. 700 1 $aLIU, G. E. 700 1 $aTASSEL, C. P. V. 700 1 $aSONSTEGARD, T. S. 700 1 $aSILVA, M. V. G. B. 700 1 $aGARCIA, J. F. 700 1 $aSÖLKNER, J. 773 $tGenetics Selection Evolution$gv. 46, n. 19, 2014.
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Embrapa Gado de Leite (CNPGL) |
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Registros recuperados : 5 | |
3. | | O'BRIEN, A. M. P.; MÉSZÁROS, G.; UTSUNOMIYA, Y. T.; SONSTEGARD, T. S.; GARCIA, J. F.; TASSEL, C. P. V.; CARVALHEIRO, R.; SILVA, M. V. G. B.; SÖLKNER, J. Linkage disequilibrium levels in Bos indicus and Bos taurus cattle using medium and high density SNP chip data and different minor allele frequency distributions. Livestock Science, v. 166, p. 121-132, 2014.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
Biblioteca(s): Embrapa Gado de Leite. |
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4. | | O'BRIEN, A. M. P.; UTSUNOMIYA, Y. T.; MÉSZÁROS, G.; BICKHART, D. M.; LIU, G. E.; TASSEL, C. P. V.; SONSTEGARD, T. S.; SILVA, M. V. G. B.; GARCIA, J. F.; SÖLKNER, J. Assessing signatures of selection through variation in linkage disequilibrium between taurine and indicine cattle. Genetics Selection Evolution, v. 46, n. 19, 2014. 14 p.Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 4 |
Biblioteca(s): Embrapa Gado de Leite. |
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5. | | UTSUNOMIYA, Y. T.; CARMO, A. S. do; CARVALHEIRO, R.; NEVES, H. H. R.; MATOS, M. C.; ZAVAREZ, L. B.; O'BRIEN, A. M. P.; SÖLKNER, J.; McEWAN, J. C.; COLE, J. B.; TASSEL, C. P. V.; SCHENKEL, F. S.; SILVA, M. V. G. B.; PORTO NETO, L. R.; SONSTEGARD, T. S.; GARCIA, J. F. Genome-wide association study for birth weight in Nellore cattle points to previously described orthologous genes affecting human and bovine height. BMC Genetics, London, v. 14, article 52, 2013.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Gado de Leite. |
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Registros recuperados : 5 | |
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