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Registro Completo |
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Biblioteca(s): |
Embrapa Soja. |
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Data corrente: |
29/12/2014 |
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Data da última atualização: |
07/04/2022 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
BENCKE-MALATO, M.; CABREIRA, C.; WIEBKE-STROHM, B.; BÜCKER-NETO, L.; MANCINI, E.; OSORIO, M. B.; HOMRICH, M. S.; TURCHETTO-ZOLET, A. C.; CARVALHO, M. C. C. G. de; STOLF, R.; WEBER, R. L. M.; WESTERGAARD, G.; CASTAGNARO, A. P.; ABDELNOOR, R. V.; MARCELINO-GUIMARÃES, F. C.; MARGIS-PINHEIRO, M.; BODANESE-ZANETTINI, M. H. |
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Afiliação: |
MARTA BENCKE-MALATO, UFRGS; CAROLINE CABREIRA, UFRGS; BEATRIZ WIEBKE-STROHM, UFRGS; LAURO BÜCKER-NETO, UFRGS; ESTEFANIA MANCINI, Instituto de Agrobiotecnologia Rosario SA; MARINA B. OSORIO, UFRGS; MILENA S. HOMRICH, UFRGS; ANDREIA CARINA TURCHETTO-ZOLET, UFRGS; MAYRA C. C. G. DE CARVALHO, CNPSO - estagiária; RENATA STOLF, CNPSO - estagiària; RICARDO L. M. WEBER, UFRGS; GASTÓN WESTERGAARD, Instituto de Agrobiotecnologia Rosario SA; ATÍLIO P. CASTAGNARO, Estación Experimental Agroindustrial Obispo Colombres (EEAOC); RICARDO VILELA ABDELNOOR, CNPSO; FRANCISMAR CORREA MARCELINO-GUIMARÃES, CNPSO; MÁRCIA MARGIS-PINHEIRO, UFRGS; MARIA HELENA BODANESE-ZANETTINI, UFRGS. |
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Título: |
Genome-wide annotation of the soybean WRKY family and functional characterization of genes involved in response to Phakopsora pachyrhizi infection. |
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Ano de publicação: |
2014 |
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Fonte/Imprenta: |
BMC Plant Biology, v. 14, n. 1, article 236, Sept. 2014. |
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Páginas: |
18 p. |
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ISSN: |
1471-2229 |
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DOI: |
10.1186/s12870-014-0236-0 |
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Idioma: |
Inglês |
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Conteúdo: |
Background: Many previous studies have shown that soybean WRKY transcription factors are involved in the plant response to biotic and abiotic stresses. Phakopsora pachyrhizi is the causal agent of Asian Soybean Rust, one of the most important soybean diseases. There are evidences that WRKYs are involved in the resistance of some soybean genotypes against that fungus. The number of WRKY genes already annotated in soybean genome was underrepresented. In the present study, a genome-wide annotation of the soybean WRKY family was carried out and members involved in the response to P. pachyrhizi were identified. Results: As a result of a soybean genomic databases search, 182 WRKY-encoding genes were annotated and 33 putative pseudogenes identified. Genes involved in the response to P. pachyrhizi infection were identified using superSAGE, RNA-Seq of microdissected lesions and microarray experiments. Seventy-five genes were differentially expressed during fungal infection. The expression of eight WRKY genes was validated by RT-qPCR. The expression of these genes in a resistant genotype was earlier and/or stronger compared with a susceptible genotype in response to P. pachyrhizi infection. Soybean somatic embryos were transformed in order to overexpress or silence WRKY genes. Embryos overexpressing a WRKY gene were obtained, but they were unable to convert into plants. When infected with P. pachyrhizi, the leaves of the silenced transgenic line showed a higher number of lesions than the wild-type plants. Conclusions: The present study reports a genome-wide annotation of soybean WRKY family. The participation of some members in response to P. pachyrhizi infection was demonstrated. The results contribute to the elucidation of gene function and suggest the manipulation of WRKYs as a strategy to increase fungal resistance in soybean plants. MenosBackground: Many previous studies have shown that soybean WRKY transcription factors are involved in the plant response to biotic and abiotic stresses. Phakopsora pachyrhizi is the causal agent of Asian Soybean Rust, one of the most important soybean diseases. There are evidences that WRKYs are involved in the resistance of some soybean genotypes against that fungus. The number of WRKY genes already annotated in soybean genome was underrepresented. In the present study, a genome-wide annotation of the soybean WRKY family was carried out and members involved in the response to P. pachyrhizi were identified. Results: As a result of a soybean genomic databases search, 182 WRKY-encoding genes were annotated and 33 putative pseudogenes identified. Genes involved in the response to P. pachyrhizi infection were identified using superSAGE, RNA-Seq of microdissected lesions and microarray experiments. Seventy-five genes were differentially expressed during fungal infection. The expression of eight WRKY genes was validated by RT-qPCR. The expression of these genes in a resistant genotype was earlier and/or stronger compared with a susceptible genotype in response to P. pachyrhizi infection. Soybean somatic embryos were transformed in order to overexpress or silence WRKY genes. Embryos overexpressing a WRKY gene were obtained, but they were unable to convert into plants. When infected with P. pachyrhizi, the leaves of the silenced transgenic line showed a higher number of lesions than ... Mostrar Tudo |
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Thesagro: |
Soja. |
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Thesaurus Nal: |
Soybeans. |
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Categoria do assunto: |
X Pesquisa, Tecnologia e Engenharia |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/114583/1/Genome-wide-annotation-of-the-soybean-WRKY-family-and-functional-characterization-of-genes-involved-in-response-to-Phakopsora-pachyrhizi-infection.pdf
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Marc: |
LEADER 02998naa a2200373 a 4500
001 2003866
005 2022-04-07
008 2014 bl uuuu u00u1 u #d
022 $a1471-2229
024 7 $a10.1186/s12870-014-0236-0$2DOI
100 1 $aBENCKE-MALATO, M.
245 $aGenome-wide annotation of the soybean WRKY family and functional characterization of genes involved in response to Phakopsora pachyrhizi infection.$h[electronic resource]
260 $c2014
300 $a18 p.
520 $aBackground: Many previous studies have shown that soybean WRKY transcription factors are involved in the plant response to biotic and abiotic stresses. Phakopsora pachyrhizi is the causal agent of Asian Soybean Rust, one of the most important soybean diseases. There are evidences that WRKYs are involved in the resistance of some soybean genotypes against that fungus. The number of WRKY genes already annotated in soybean genome was underrepresented. In the present study, a genome-wide annotation of the soybean WRKY family was carried out and members involved in the response to P. pachyrhizi were identified. Results: As a result of a soybean genomic databases search, 182 WRKY-encoding genes were annotated and 33 putative pseudogenes identified. Genes involved in the response to P. pachyrhizi infection were identified using superSAGE, RNA-Seq of microdissected lesions and microarray experiments. Seventy-five genes were differentially expressed during fungal infection. The expression of eight WRKY genes was validated by RT-qPCR. The expression of these genes in a resistant genotype was earlier and/or stronger compared with a susceptible genotype in response to P. pachyrhizi infection. Soybean somatic embryos were transformed in order to overexpress or silence WRKY genes. Embryos overexpressing a WRKY gene were obtained, but they were unable to convert into plants. When infected with P. pachyrhizi, the leaves of the silenced transgenic line showed a higher number of lesions than the wild-type plants. Conclusions: The present study reports a genome-wide annotation of soybean WRKY family. The participation of some members in response to P. pachyrhizi infection was demonstrated. The results contribute to the elucidation of gene function and suggest the manipulation of WRKYs as a strategy to increase fungal resistance in soybean plants.
650 $aSoybeans
650 $aSoja
700 1 $aCABREIRA, C.
700 1 $aWIEBKE-STROHM, B.
700 1 $aBÜCKER-NETO, L.
700 1 $aMANCINI, E.
700 1 $aOSORIO, M. B.
700 1 $aHOMRICH, M. S.
700 1 $aTURCHETTO-ZOLET, A. C.
700 1 $aCARVALHO, M. C. C. G. de
700 1 $aSTOLF, R.
700 1 $aWEBER, R. L. M.
700 1 $aWESTERGAARD, G.
700 1 $aCASTAGNARO, A. P.
700 1 $aABDELNOOR, R. V.
700 1 $aMARCELINO-GUIMARÃES, F. C.
700 1 $aMARGIS-PINHEIRO, M.
700 1 $aBODANESE-ZANETTINI, M. H.
773 $tBMC Plant Biology$gv. 14, n. 1, article 236, Sept. 2014.
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Registro original: |
Embrapa Soja (CNPSO) |
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| Registros recuperados : 50 | |
| 41. |  | NEPOMUCENO, A. L.; SILVA, J. F. V.; LEMOS, E. G. M.; BINNECK, E.; CARNEIRO, N.; MARIN, S. R. R.; SILVEIRA, C. A.; BASSOI, M. C.; ALMEIDA, A. M. R.; MORALES, A.; BENEVENTI, M. A.; GIACOMINI, N.; STOLF, R.; FUGANTI, R.; NEUMAIER, N.; FARIAS, J. R. B.; ARIAS, C. A. A.; MOLINA, J. C.; WENDLAND, A. Genômica funcional em plantas de soja submetidas a estresses bióticos e abióticos. In: REUNIÃO DE PESQUISA DE SOJA DA REGIÃO CENTRAL DO BRASIL, 25., 2003, Uberaba. Resumos... Londrina: Embrapa Soja: EPAMIG: Fundação Triângulo, 2003. p. 113-114. (Embrapa Soja. Documentos, 209). Organizado por Odilon Ferreira Saraiva, Regina Maria Villas Boas de Campos Leite.| Biblioteca(s): Embrapa Soja. |
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| 42. | | NEPOMUCENO, A. L.; SILVA, J. F. V.; LEMOS, E.; BINNECK, E.; CARNEIRO, N.; MARIN, S. R.; SILVEIRA, C. A.; BASSOI, M. C.; ALMEIDA, A. M.; MORALES, A.; BENEVENTI, M. A.; GIACOMINI, N.; STOLF, R.; FUGANTI, R.; NEUMAIER, N.; FARIAS, J. R. B.; ARIAS, C. A.; MOLINA, J. C.; WENDLAND, A. Genômica Funcional: Tolerância à seca e resistência a nematóides em soja. Brazilian Journal of Plant Physiology, Campinas, v.15, p.80, 2003. Suplemento. Resumo apresentado no IX Congresso Brasileiro de Fisiologia Vegetal, Atibaia, 2003.| Biblioteca(s): Embrapa Soja. |
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| 43. | | STOLF, R.; LEMOS, E. G. de M.; CARARETO-ALVES, L.; PEREIRA, R.; KISHI, L.; MARCONDES, J.; PEREIRA, S. dos S.; ROLLA, A. A. de P.; YAMANAKA, N.; OLIVEIRA, M. C. N. de; BINNECK, E.; ABDELNOOR, R. V.; FARIAS, J. R. B.; NEPOMUCENO, A. L. Identificação de genes de soja diferencialmente expressos durante a seca. In: CONGRESSO BRASILEIRO DE MELHORAMENTO DE PLANTAS, 4., 2007, São Lourenço. Anais... São Lourenço: Sociedade Brasileira de Melhoramento de Plantas, 2007. 1 CD-ROM. Pdf. 411.| Tipo: Artigo em Anais de Congresso / Nota Técnica | Circulação/Nível: -- - -- |
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| 44. | | NEPOMUCENO, A. L.; FARIAS, J. R. B.; YAMAGUCHI-SHINOZAKI, K.; BENEVENTI, M. A.; NEUMAIER, N.; YAMANAKA, N.; NAKASHIMA, K.; BINNECK, E.; MARIN, S. R. R.; STOLF, R.; FUGANTI, R.; SILVEIRA, C. A. da; OLIVEIRA, M. C. N. de; ABDELNOOR, R. V.; ROLLA, A. A. P.; POLIZEL, A. M. Introdução de genes por biobalística em soja visando tolerância à seca. In: SARAIVA, O. F.; LEITE, R. M. V. B. de C. (Ed.). Resultados de pesquisa da Embrapa Soja 2006. Londrina: Embrapa Soja, 2008. p. 109-124. (Embrapa Soja. Documentos, 308).| Tipo: Capítulo em Livro Técnico-Científico |
| Biblioteca(s): Embrapa Soja. |
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| 45. | | BENEVENTI, M. A.; NAKASHIMA, K.; YAMANAKA, N.; BINNECK, E.; FARIAS, J. R. B.; OLIVEIRA, M. C. N.; NEUMAIER, N.; ABDELNOOR, R. V.; MARCELINO, F. C.; MARIN, S. R. R.; SILVEIRA, C. A.; FUGANTI R.; STOLF, R.; SALINET, L.; ROLLA, A. A. P.; POLIZEL, A. M.; YAMAGUCHI-SHINOZAKI, K.; NEPOMUCENO, A. L. Introduction of Arabidopsis thaliana DREB1A/CBF3 transcription factor into soybean improves drought stress tolerance. In: INTERNATIONAL CONFERENCE ON INTEGRATED APPROACHES TO IMPROVE CROP PRODUCTION UNDER DROUGHT-PRONE ENVIRONMENTS, 3., 2009, Shangai. Abstracts... Shangai: Shangai Academy of Agricultural Sciences: Shangai Agrobiological Gene Center, 2009. p. 133, ref. P 4.07. INTERDROUGHT 2009.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Soja. |
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| 46. | | BINNECK, E.; MORALES, A. M. R.; ALMEIDA, A. M. R.; ARIAS, C. A. A.; SILVEIRA, C. A.; SILVA, J. F. V.; FARIAS, J. R. B.; MOLINA, J. C.; PEDROSO, J. C.; BRETON, M. C.; LEMOS, N. G.; NEUMAIER, N.; MARTINS, P. K.; FUGANTI, R.; STOLF, R.; MARIN, S. R. R.; NEPOMUCENO, A. L. A visual system for DNA sequencing quality control. In: INTERNATIONAL CONFERENCE ON BIOINFOMATICS AND COMPUTATION BIOLOGY, 1., 2003, Ribeirão Preto. Resumos... [S.l.]: CBAB - Centro Brasileiro-Argentino de Biotecnologia, 2003. p. 47.| Biblioteca(s): Embrapa Soja. |
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| 47. | | BINNECK, E.; SILVA, J. F. V.; NEUMAIER, N.; FARIAS, J. R. B.; ARIAS, C. A. A.; ALMEIDA, A. M. R.; MARIN, S. R. R.; WENDLAND, A.; SILVEIRA, C. A. da; MOLINA, J. C.; LEMOS, N. G.; FUGANTI, R.; STOLF, R.; NEPOMUCENO, A. L. VSQual: a visual system to assist the DNA sequencing quality control. In: WORLD SOYBEAN RESEARCH CONFERENCE, 7.; INTERNATIONAL SOYBEAN PROCESSING AND UTILIZATION CONFERENCE, 4.; CONGRESSO BRASILEIRO DE SOJA, 3., 2004, Foz do Iguassu. Abstracts of contributed papers and posters. Londrina: Embrapa Soybean, 2004. p. 249-250. (Embrapa Soja. Documentos, 228). Editado por Flávio Moscardi, Clara Beatriz Hoffmann-Campo, Odilon Ferreira Saraiva, Paulo Roberto Galerani, Francisco Carlos Krzyzanowski, Mercedes Concordia Carrão-Panizzi.| Biblioteca(s): Embrapa Soja. |
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| 48. | | SILVA, D. C. G. da; STOLF, R.; MORTEL, M. de van; LEMOS, N. G.; SANTOS, J. V. M. dos; PEREIRA, R. M.; BINNECK, E.; ALMEIDA, A. M. R.; NEPOMUCENO, A. L.; YAMANAKA, N.; MARCELINO, F. C.; BAUM, T. J.; WHITHAM, S. A.; LEMOS, E. G. M.; ABDELNOOR, R. V. Transcritos da soja induzidos durante interação com a ferrugem asiática. In: CONGRESSO BRASILEIRO DE GENÉTICA, 54., 2008, Salvador. Resumos... Salvador: SBG, 2008. p. 319.| Tipo: Resumo em Anais de Congresso |
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| 49. | | WIEBKE-STROHM, B.; PASQUALI, G.; MARGIS-PINHEIRO, M.; BENCKE, M.; BÜCKER-NETO, L.; BECKER-RITT, A. B.; MARTINELLI, A. H. S.; RECHENMACHER, C.; POLACCO, J. C.; STOLF, R.; MARCELINO, F. C.; ABDELNOOR, R. V.; HOMRICH, M. S.; DEL PONTE, E. M.; CARLINI, C. R.; CARVALHO, M. C. C. G. de; BODANESE-ZANETTINI, M. H. Ubiquitous urease affects soybean susceptibility to fungi. Plant Molecular Biology, The Hague, v. 79, n. 1/2, p. 75-87, May 2012.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Soja. |
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| 50. | | WIEBKE-STROHM, B.; PASQUALI, G.; MARGIS-PINHEIRO, M.; BENCKE, M.; BÜCKER-NETO, L.; BECKER-RITT, A. B.; MARTINELLI, A. H. S.; POLACCO, J. C.; STOLF, R.; MARCELINO, F. C.; ABDELNOOR, R. V.; HOMRICH, S. H.; DEL PONTE, E. M.; CARLINI, C. R.; BODANESE-ZANETTINI, M. H. Urease affects soybean susceptibility to fungi. In: BRAZILIAN SYMPOSIUM ON PLANT MOLECULAR BIOLOGY, 3., 2011, Ilhéus. [Abstracts...]. [Ribeirão Preto]: SBG, 2011. 1 p. 1 CD-ROM.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Soja. |
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