| |
|
|
|
Registro Completo |
|
Biblioteca(s): |
Embrapa Agroenergia; Embrapa Soja. |
|
Data corrente: |
08/12/2022 |
|
Data da última atualização: |
08/12/2022 |
|
Tipo da produção científica: |
Artigo em Periódico Indexado |
|
Autoria: |
DUARTE, K E. D.; BASSO, M. F.; OLIVEIRA, N. G. de; SILVA, J. C. F. da; GARCIA, B. de O.; DIAS, B. B. A.; CARDOSO, T. B.; NEPOMUCENO, A. L.; KOBAYASHI, A. K.; SANTIAGO, T. R.; SOUZA, W. R. de; MOLINARI, H. B. C. |
|
Afiliação: |
KAROLINE ESTEFANI DUARTE, Federal University of ABC; MARCOS FERNANDO BASSO, Mato Grosso Cotton Institute; NELSON GERALDO DE OLIVEIRA, EMBRAPA AGROENERGY; JOSÉ CLEYDSON FERREIRA DA SILVA, FEDERAL UNIVERSITY OF VIÇOSA; BRUNO DE OLIVEIRA GARCIA, Federal University of Viçosa; BARBARA ANDRADE DIAS BRITO DA CUNHA, CNPAE; THIAGO BERGAMO CARDOSO, Sempre AGTECH; ALEXANDRE LIMA NEPOMUCENO, CNPSO; ADILSON KENJI KOBAYASHI, CNPAE; THAÍS RIBEIRO SANTIAGO, UNIVERSITY OF BRASÍLIA; WAGNER RODRIGO DE SOUZA, Federal University of ABC; HUGO BRUNO CORREA MOLINARI, Sempre AGTECH. |
|
Título: |
MicroRNAs expression profiles in early responses to different levels of water deficit in Setaria viridis. |
|
Ano de publicação: |
2022 |
|
Fonte/Imprenta: |
Physiology and Molecular Biology of Plants, v. 28, n. 8, p. 1607-1624, 2022. |
|
DOI: |
https://doi.org/10.1007/s12298-022-01226-z |
|
Idioma: |
Inglês |
|
Conteúdo: |
Water deficit is a major constraint for crops of economic importance in almost all agricultural regions. However, plants have an active defense system to adapt to these adverse conditions, acting in the reprogramming of gene expression responsible for encoding microRNAs (miRNAs). These miRNAs promote the regulation to the target gene expression by the post-transcriptional (PTGS) and transcriptional gene silencing (TGS), modulating several pathways including defense response to water deficit. The broader knowledge of the miRNA expression profile and its regulatory networks in response to water deficit can provide evidence for the development of new biotechnological tools for genetic improvement of several important crops. In this study, we used Setaria viridis accession A10.1 as a C4 model plant to widely investigate the miRNA expression profile in early responses to different levels of water deficit. Ecophysiological studies in Setaria viridis under water deficit and after rewatering demonstrated a drought tolerant accession, capable of a rapid recovery from the stress. Deep small RNA sequencing and degradome studies were performed in plants submitted to drought to identify differentially expressed miRNA genes and their predicted targets, using in silico analysis. Our findings showed that several miRNAs were differentially modulated in response to distinctive levels of water deficit and after rewatering. The predicted mRNA targets mainly corresponded to genes related to cell wall remodeling, antioxidant system and drought-related transcription factors, indicating that these genes are rapidly regulated in early responses to drought stress. The implications of these modulations are extensively discussed, and higher-effect miRNAs are suggested as major players for potential use in genetic engineering to improve drought tolerance in economically important crops, such as sugarcane, maize, and sorghum. MenosWater deficit is a major constraint for crops of economic importance in almost all agricultural regions. However, plants have an active defense system to adapt to these adverse conditions, acting in the reprogramming of gene expression responsible for encoding microRNAs (miRNAs). These miRNAs promote the regulation to the target gene expression by the post-transcriptional (PTGS) and transcriptional gene silencing (TGS), modulating several pathways including defense response to water deficit. The broader knowledge of the miRNA expression profile and its regulatory networks in response to water deficit can provide evidence for the development of new biotechnological tools for genetic improvement of several important crops. In this study, we used Setaria viridis accession A10.1 as a C4 model plant to widely investigate the miRNA expression profile in early responses to different levels of water deficit. Ecophysiological studies in Setaria viridis under water deficit and after rewatering demonstrated a drought tolerant accession, capable of a rapid recovery from the stress. Deep small RNA sequencing and degradome studies were performed in plants submitted to drought to identify differentially expressed miRNA genes and their predicted targets, using in silico analysis. Our findings showed that several miRNAs were differentially modulated in response to distinctive levels of water deficit and after rewatering. The predicted mRNA targets mainly corresponded to genes related to cell... Mostrar Tudo |
|
Thesagro: |
Bioenergia; Setária. |
|
Thesaurus Nal: |
Abiotic stress; Bioenergy; Drought; Setaria viridis. |
|
Categoria do assunto: |
--
X Pesquisa, Tecnologia e Engenharia |
|
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1149404/1/MicroRNAs.pdf
|
|
Marc: |
LEADER 02948naa a2200337 a 4500
001 2149404
005 2022-12-08
008 2022 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.1007/s12298-022-01226-z$2DOI
100 1 $aDUARTE, K E. D.
245 $aMicroRNAs expression profiles in early responses to different levels of water deficit in Setaria viridis.$h[electronic resource]
260 $c2022
520 $aWater deficit is a major constraint for crops of economic importance in almost all agricultural regions. However, plants have an active defense system to adapt to these adverse conditions, acting in the reprogramming of gene expression responsible for encoding microRNAs (miRNAs). These miRNAs promote the regulation to the target gene expression by the post-transcriptional (PTGS) and transcriptional gene silencing (TGS), modulating several pathways including defense response to water deficit. The broader knowledge of the miRNA expression profile and its regulatory networks in response to water deficit can provide evidence for the development of new biotechnological tools for genetic improvement of several important crops. In this study, we used Setaria viridis accession A10.1 as a C4 model plant to widely investigate the miRNA expression profile in early responses to different levels of water deficit. Ecophysiological studies in Setaria viridis under water deficit and after rewatering demonstrated a drought tolerant accession, capable of a rapid recovery from the stress. Deep small RNA sequencing and degradome studies were performed in plants submitted to drought to identify differentially expressed miRNA genes and their predicted targets, using in silico analysis. Our findings showed that several miRNAs were differentially modulated in response to distinctive levels of water deficit and after rewatering. The predicted mRNA targets mainly corresponded to genes related to cell wall remodeling, antioxidant system and drought-related transcription factors, indicating that these genes are rapidly regulated in early responses to drought stress. The implications of these modulations are extensively discussed, and higher-effect miRNAs are suggested as major players for potential use in genetic engineering to improve drought tolerance in economically important crops, such as sugarcane, maize, and sorghum.
650 $aAbiotic stress
650 $aBioenergy
650 $aDrought
650 $aSetaria viridis
650 $aBioenergia
650 $aSetária
700 1 $aBASSO, M. F.
700 1 $aOLIVEIRA, N. G. de
700 1 $aSILVA, J. C. F. da
700 1 $aGARCIA, B. de O.
700 1 $aDIAS, B. B. A.
700 1 $aCARDOSO, T. B.
700 1 $aNEPOMUCENO, A. L.
700 1 $aKOBAYASHI, A. K.
700 1 $aSANTIAGO, T. R.
700 1 $aSOUZA, W. R. de
700 1 $aMOLINARI, H. B. C.
773 $tPhysiology and Molecular Biology of Plants$gv. 28, n. 8, p. 1607-1624, 2022.
Download
Esconder MarcMostrar Marc Completo |
|
Registro original: |
Embrapa Agroenergia (CNPAE) |
|
|
Biblioteca |
ID |
Origem |
Tipo/Formato |
Classificação |
Cutter |
Registro |
Volume |
Status |
URL |
Voltar
|
|
|
| Registros recuperados : 255 | |
| 82. |  | SOUZA, R. P.; SOUSA, T. F.; QUEIROZ, C. A.; LOPES, E. F.; YAMAGISHI, M. E. B.; SILVA, G. F. da. Identificação de clusters gênicos biossintéticos relacionados a produção de antibióticos em pool bacteriano isolado de sedimentos de rios amazônicos. In: SIMPÓSIO DE BIOTECNOLOGIA DA UNIVERSIDADE FEDERAL DO AMAZONAS, 1., 2022, Manaus. Anais [recurso eletrônico]: resumos expandidos. Manaus: EDUA, 2022. p. 8.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Agricultura Digital. |
|   |
| 83. | | SOUZA, R. P.; SOUSA, T. F.; QUEIROZ, C. A.; LOPES, E. F.; YAMAGISHI, M. E. B.; SILVA, G. F. da. Identificação de clusters gênicos biossintéticos relacionados a produção de antibióticos em pool bacteriano isolado de sedimentos de rios amazônicos. In: SIMPÓSIO DE BIOTECNOLOGIA DA UNIVERSIDADE FEDERAL DO AMAZONAS, 1., 2022, Manaus. Anais [recurso eletrônico]: resumos expandidos. Manaus: EDUA, 2022. p. 8.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Amazônia Ocidental. |
| |
| 86. | | SILVA, J. M. da; ROMANIUC, A. R.; CAETANO, A. R.; GIACHETTO, P. F.; YAMAGISHI, M. E. B. Java Merging Copy Number Variants (JM-CNV): a new algorithm for identifying Copy Number Variant Regions (CNVR). In: PLANT & ANIMAL GENOME CONFERENCE, 23., 2015, San Diego, CA. [Abstracts...]. San Diego: [s.n.], 2015. Não paginado. PAG 2015. Pôster P1170.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Agricultura Digital. |
|  |
| 88. | | VIEIRA, F. D.; PAIVA, S. R.; YAMAGISHI, M. E. B.; OLIVEIRA, S. R. de M.; HIGA, R. Databases & data integration text mining & information extraction. In: INTERNATIONAL CONFERENCE OF THE BRAZILIAN ASSOCIATION FOR BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 7.; INTERNATIONAL CONFERENCE OF THE IBEROAMERICAN SOCIETY FOR BIOINFORMATICS, 3., 2011, Florianópolis. Proceedings... Florianópolis: Associação Brasileira de Bioinformática e Biologia Computacional, 2011. Não paginado. X-MEETING, 2011.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
|  |
| 89. | | VIEIRA, F. D.; PAIVA, S. R.; YAMAGISHI, M. E. B.; OLIVEIRA, S. R. de M.; HIGA, R. Databases & data integration text mining & information extraction. In: INTERNATIONAL CONFERENCE OF THE BRAZILIAN ASSOCIATION FOR BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 7.; INTERNATIONAL CONFERENCE OF THE IBEROAMERICAN SOCIETY FOR BIOINFORMATICS, 3., 2011, Florianópolis. Proceedings... Florianópolis: Associação Brasileira de Bioinformática e Biologia Computacional, 2011. Não paginado. X-MEETING, 2011.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Agricultura Digital. |
| |
| 90. | | PAIVA, S. R.; LACERDA, T. S.; YAMAGISHI, M.; FARIA, D. A.; MCMANUS, C.; CAETANO, A.; BLACKBURN, H. Desenvolvimento e validação de um painel de baixa densidade de marcadores snp relacionado a prolificade em ovinos. In: CONGRESSO BRASILEIRO DE RECURSOS GENÉTICOS, 4., 2016, Curitiba. Recursos genéticos no Brasil: a base para o desenvolvimento sustentável: anais. Brasília, DF: Sociedade Brasileira de Recursos Genéticos, 2016.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
| |
| 91. | | CAMPOS, C. C. B.; SOUSA, T. F.; SILVA, I. J. da; YAMAGISHI, M. E. B.; SILVA, G. F. da. Diversidade de clusters gênicos biossintéticos em Streptomyces sp. Mad39, isolado com potencial para biocontrole de patógenos de cadeias agrícolas regionais. In: SIMPÓSIO DE BIOTECNOLOGIA DA UNIVERSIDADE FEDERAL DO AMAZONAS, 1., 2022, Manaus. Anais [recurso eletrônico]: resumos expandidos. Manaus: EDUA, 2022. p. 7.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Amazônia Ocidental. |
| |
| 92. | | CAMPOS, C. C. B.; SOUSA, T. F.; SILVA, I. J. da; YAMAGISHI, M. E. B.; SILVA, G. F. da. Diversidade de clusters gênicos biossintéticos em Streptomyces sp. MAD39, isolado com potencial para biocontrole de patógenos de cadeias agrícolas regionais. In: SIMPÓSIO DE BIOTECNOLOGIA DA UNIVERSIDADE FEDERAL DO AMAZONAS, 1., 2022, Manaus. Anais [recurso eletrônico]: resumos expandidos. Manaus: EDUA, 2022. p. 7.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Agricultura Digital. |
| |
| 93. | | GIACHETTO, P. F.; YAMAGISHI, M. E. B.; SANTOS, E. H. dos; IBELLI, A. M. G.; REGITANO, L. C. de A. Transcriptional networks reconstruction: identification of genes involved on cattle response to tick Rhipicephalus (Boophilus) microplus infestation. In: INTERNATIONAL CONFERENCE OF THE BRAZILIAN ASSOCIATION FOR BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 6., 2010, Ouro Preto. Abstracts... [S.l.: s.n.], 2010. p. 154. Na publicação: Regitano, L.C.A. X-meeting 2010.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
| |
| 97. | | LOBO, I.; NASCIMENTO, A.; YAMAGISHI, M. E. B.; GUIGUEN, Y.; SILVA, G. F.; O'SULLIVAN, F. L. A. The tambaqui (Colossoma macropomum) transcriptome at sex differentiation stage. In: INTERNATIONAL SYMPOSIUM ON REPRODUCTIVE PHYSIOLOGY OF FISH, 11., 2018, Manaus. New fromtiers in reproductive diversity in a changing environment: program and abstracts. [S.l.: s.n.], 2018. p. 90. Na publicação: Yamagishi, M., Almeida, F. L. ISRPF 2018.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Agricultura Digital. |
| |
| 99. | | QUEIROS, L. R.; VISOLI, M. C.; YAMAGISHI, M. E. B.; IDE, F. H.; VACARI, I.; SANTOS, A. D. dos; COSTA, I. R. S.; BENITO, N. P. Alelo - Gestor Integrado de Recursos Genéticos - Processo Análise Quarentenária de Germoplasma Vegetal (planejamento, acompanhamento e finalização). Versão 0.32. Campinas: Embrapa Informática Agropecuária, 2012. 1 CD-ROM.| Biblioteca(s): Embrapa Agricultura Digital. |
| |
| Registros recuperados : 255 | |
|
| Nenhum registro encontrado para a expressão de busca informada. |
|
|
