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Registro Completo |
Biblioteca(s): |
Embrapa Agroenergia; Embrapa Soja. |
Data corrente: |
08/12/2022 |
Data da última atualização: |
08/12/2022 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Autoria: |
DUARTE, K E. D.; BASSO, M. F.; OLIVEIRA, N. G. de; SILVA, J. C. F. da; GARCIA, B. de O.; DIAS, B. B. A.; CARDOSO, T. B.; NEPOMUCENO, A. L.; KOBAYASHI, A. K.; SANTIAGO, T. R.; SOUZA, W. R. de; MOLINARI, H. B. C. |
Afiliação: |
KAROLINE ESTEFANI DUARTE, Federal University of ABC; MARCOS FERNANDO BASSO, Mato Grosso Cotton Institute; NELSON GERALDO DE OLIVEIRA, EMBRAPA AGROENERGY; JOSÉ CLEYDSON FERREIRA DA SILVA, FEDERAL UNIVERSITY OF VIÇOSA; BRUNO DE OLIVEIRA GARCIA, Federal University of Viçosa; BARBARA ANDRADE DIAS BRITO DA CUNHA, CNPAE; THIAGO BERGAMO CARDOSO, Sempre AGTECH; ALEXANDRE LIMA NEPOMUCENO, CNPSO; ADILSON KENJI KOBAYASHI, CNPAE; THAÍS RIBEIRO SANTIAGO, UNIVERSITY OF BRASÍLIA; WAGNER RODRIGO DE SOUZA, Federal University of ABC; HUGO BRUNO CORREA MOLINARI, Sempre AGTECH. |
Título: |
MicroRNAs expression profiles in early responses to different levels of water deficit in Setaria viridis. |
Ano de publicação: |
2022 |
Fonte/Imprenta: |
Physiology and Molecular Biology of Plants, v. 28, n. 8, p. 1607-1624, 2022. |
DOI: |
https://doi.org/10.1007/s12298-022-01226-z |
Idioma: |
Inglês |
Conteúdo: |
Water deficit is a major constraint for crops of economic importance in almost all agricultural regions. However, plants have an active defense system to adapt to these adverse conditions, acting in the reprogramming of gene expression responsible for encoding microRNAs (miRNAs). These miRNAs promote the regulation to the target gene expression by the post-transcriptional (PTGS) and transcriptional gene silencing (TGS), modulating several pathways including defense response to water deficit. The broader knowledge of the miRNA expression profile and its regulatory networks in response to water deficit can provide evidence for the development of new biotechnological tools for genetic improvement of several important crops. In this study, we used Setaria viridis accession A10.1 as a C4 model plant to widely investigate the miRNA expression profile in early responses to different levels of water deficit. Ecophysiological studies in Setaria viridis under water deficit and after rewatering demonstrated a drought tolerant accession, capable of a rapid recovery from the stress. Deep small RNA sequencing and degradome studies were performed in plants submitted to drought to identify differentially expressed miRNA genes and their predicted targets, using in silico analysis. Our findings showed that several miRNAs were differentially modulated in response to distinctive levels of water deficit and after rewatering. The predicted mRNA targets mainly corresponded to genes related to cell wall remodeling, antioxidant system and drought-related transcription factors, indicating that these genes are rapidly regulated in early responses to drought stress. The implications of these modulations are extensively discussed, and higher-effect miRNAs are suggested as major players for potential use in genetic engineering to improve drought tolerance in economically important crops, such as sugarcane, maize, and sorghum. MenosWater deficit is a major constraint for crops of economic importance in almost all agricultural regions. However, plants have an active defense system to adapt to these adverse conditions, acting in the reprogramming of gene expression responsible for encoding microRNAs (miRNAs). These miRNAs promote the regulation to the target gene expression by the post-transcriptional (PTGS) and transcriptional gene silencing (TGS), modulating several pathways including defense response to water deficit. The broader knowledge of the miRNA expression profile and its regulatory networks in response to water deficit can provide evidence for the development of new biotechnological tools for genetic improvement of several important crops. In this study, we used Setaria viridis accession A10.1 as a C4 model plant to widely investigate the miRNA expression profile in early responses to different levels of water deficit. Ecophysiological studies in Setaria viridis under water deficit and after rewatering demonstrated a drought tolerant accession, capable of a rapid recovery from the stress. Deep small RNA sequencing and degradome studies were performed in plants submitted to drought to identify differentially expressed miRNA genes and their predicted targets, using in silico analysis. Our findings showed that several miRNAs were differentially modulated in response to distinctive levels of water deficit and after rewatering. The predicted mRNA targets mainly corresponded to genes related to cell... Mostrar Tudo |
Thesagro: |
Bioenergia; Setária. |
Thesaurus Nal: |
Abiotic stress; Bioenergy; Drought; Setaria viridis. |
Categoria do assunto: |
-- X Pesquisa, Tecnologia e Engenharia |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1149404/1/MicroRNAs.pdf
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Marc: |
LEADER 02948naa a2200337 a 4500 001 2149404 005 2022-12-08 008 2022 bl uuuu u00u1 u #d 024 7 $ahttps://doi.org/10.1007/s12298-022-01226-z$2DOI 100 1 $aDUARTE, K E. D. 245 $aMicroRNAs expression profiles in early responses to different levels of water deficit in Setaria viridis.$h[electronic resource] 260 $c2022 520 $aWater deficit is a major constraint for crops of economic importance in almost all agricultural regions. However, plants have an active defense system to adapt to these adverse conditions, acting in the reprogramming of gene expression responsible for encoding microRNAs (miRNAs). These miRNAs promote the regulation to the target gene expression by the post-transcriptional (PTGS) and transcriptional gene silencing (TGS), modulating several pathways including defense response to water deficit. The broader knowledge of the miRNA expression profile and its regulatory networks in response to water deficit can provide evidence for the development of new biotechnological tools for genetic improvement of several important crops. In this study, we used Setaria viridis accession A10.1 as a C4 model plant to widely investigate the miRNA expression profile in early responses to different levels of water deficit. Ecophysiological studies in Setaria viridis under water deficit and after rewatering demonstrated a drought tolerant accession, capable of a rapid recovery from the stress. Deep small RNA sequencing and degradome studies were performed in plants submitted to drought to identify differentially expressed miRNA genes and their predicted targets, using in silico analysis. Our findings showed that several miRNAs were differentially modulated in response to distinctive levels of water deficit and after rewatering. The predicted mRNA targets mainly corresponded to genes related to cell wall remodeling, antioxidant system and drought-related transcription factors, indicating that these genes are rapidly regulated in early responses to drought stress. The implications of these modulations are extensively discussed, and higher-effect miRNAs are suggested as major players for potential use in genetic engineering to improve drought tolerance in economically important crops, such as sugarcane, maize, and sorghum. 650 $aAbiotic stress 650 $aBioenergy 650 $aDrought 650 $aSetaria viridis 650 $aBioenergia 650 $aSetária 700 1 $aBASSO, M. F. 700 1 $aOLIVEIRA, N. G. de 700 1 $aSILVA, J. C. F. da 700 1 $aGARCIA, B. de O. 700 1 $aDIAS, B. B. A. 700 1 $aCARDOSO, T. B. 700 1 $aNEPOMUCENO, A. L. 700 1 $aKOBAYASHI, A. K. 700 1 $aSANTIAGO, T. R. 700 1 $aSOUZA, W. R. de 700 1 $aMOLINARI, H. B. C. 773 $tPhysiology and Molecular Biology of Plants$gv. 28, n. 8, p. 1607-1624, 2022.
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Registro original: |
Embrapa Agroenergia (CNPAE) |
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Registros recuperados : 24 | |
7. | | ROSSATO, M.; SANTIAGO, T. R.; ALVES, A. R.; CARVALHO, I. C. B.; LOPES, C. A. Reaction of chickpea cultivars to bacterial wilt, a new disease to a crop under expansion in Brazil. In: INTERNATIONAL BACTERIAL WILT SYMPOSIUM, 7., 2023, Montevideo. Abstract book. Montevideo: Universidad de la República Uruguay : INIA, 2023. p. 104.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Hortaliças. |
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9. | | RÊGO-MACHADO, C. de M.; DINIZ, F. de A. dos S.; INOUE-NAGATA, A. K.; ANDRADE, E. C. de; SANTIAGO, T. R. Do cossupressão à tecnologia de RNAí: histórico, mecanismo e exemplos de aplicação tópica de RNA para controle de fitopatógenos. In:RIOS, J. A.; ALMEIDA, L. C.; SOUZA, E. B. de (ed.). Resistência de plantas a patógenos. Recife: Universidade Federal Rural de Pernambuco, 2021.Tipo: Capítulo em Livro Técnico-Científico |
Biblioteca(s): Embrapa Hortaliças. |
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10. | | SANTIAGO, T. R.; DUARTE, K. E.; SOUZA, W. R. de; STEINDORFF, A. S.; FORMIGHIERI, E. F.; KOBAYASHI, A. K.; MOLINARI, H. B. C. Divergence of DNA methylation and gene expression in Setaria viridis accessions under drought stress. In: ENCONTRO DE PESQUISA E INOVAÇÃO DA EMBRAPA AGROENERGIA, 5., 2018, Brasília, DF. Anais ... Brasília, DF: Embrapa Agroenergia, 2018. p. 31.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Agroenergia. |
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11. | | SILVA, L. P.; VAZ, G. M. da R.; PUPE, J. M.; CHAFRAN, L. S.; ARAUJO NETO, L. A.; SANTIAGO, T. R.; ARAÚJO, T. F.; POLEZ, V. L. P. Green nanoparticles for biomedical and bioengineering applications. In: SHUKLA, A. (Ed.). Nanoparticles and their biomedical applications. Singapore: Springer, 2020. p. 225-262Tipo: Capítulo em Livro Técnico-Científico |
Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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12. | | SANTIAGO, T. R.; BONATTO, C. C.; ROSSATO, M.; LOPES, C. A. P.; LOPES, C. A.; MIZUBUTI, E. S. G.; SILVA, L. P. Green synthesis of silver nanoparticles using tomato leaf extract and their entrapment in chitosan nanoparticles to control bacterial wilt. Journal of the Science of Food and Agriculture, v. 99, n. 9, p. 4248-4259, 2019.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Hortaliças; Embrapa Recursos Genéticos e Biotecnologia. |
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13. | | PEREIRA, V. M.; DIAS, B. B. A.; SANTIAGO, T. R.; KOBAYASHI, A. K.; MOLINARI, H. B. C.; FAVARO, L. C. de L. Identification and expression of sugarcane culm-specific expansin genes. In: BRAZILIAN BIOENERGY AND TECNOLOGY CONFERENCE - BBEST, 2017, Campos do Jordão, SP. [Resumos ...]. Campinas: SBE, 2017. Não paginado.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Agroenergia. |
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14. | | ROLIM, L.; SANTIAGO, T. R.; REIS JUNIOR, F. B. dos; MENDES, I. de C.; DO VALE, H. M. M.; HUNGRIA, M.; SILVA, L. P. Identification of soybean Bradyrhizobium strains used in commercial inoculants in Brazil by MALDI-TOF mass spectrometry. Brazilian Journal of Microbiology, v. 50, n. 4, p. 905-914, 2019.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia; Embrapa Soja. |
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15. | | SILVA, L. P. da; SILVEIRA, A. P.; BONATTO, C. C.; BARBOSA, E. F.; MEDEIROS, K. A.; VIOL, L. C. de S.; PEREIRA, T. M.; SANTIAGO, T. R.; POLEZ, V. L. P.; LAURIA, V. B. M. Sustainable exploitation of agricultural, forestry, and food residues for green nanotechnology applications. In: THANGADURAI, D.; ISLAM, S.; SANGEETHA, J.; MARTINS, N. (Org.). Biogenic nanomaterials: structural properties and functional applications. Palm Bay: Apple Academic, 2021. Cap. 12, p. 301-345. (Innovations in Biotechnology, 1) Na Publicação: Luciano Paulino Silva.Tipo: Capítulo em Livro Técnico-Científico |
Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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16. | | SANTIAGO, T. R.; PEREIRA, V. M.; SOUZA, W. R.; STEINDORFF, A. S.; DIAS, B. B. A.; GASPAR, M.; FAVARO, L. C. de L.; FORMIGHIERI, E. F.; KOBAYASHI, A. K.; MOLINARI, H. B. C. Genome-wide identification, characterization and expression profile analysis of expansins gene family in sugarcane (Saccharum spp.). PLoS One, v. 13, n. 1, artigo e0191081, 2018.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Agroenergia. |
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17. | | DUARTE, K E. D.; BASSO, M. F.; OLIVEIRA, N. G. de; SILVA, J. C. F. da; GARCIA, B. de O.; DIAS, B. B. A.; CARDOSO, T. B.; NEPOMUCENO, A. L.; KOBAYASHI, A. K.; SANTIAGO, T. R.; SOUZA, W. R. de; MOLINARI, H. B. C. MicroRNAs expression profiles in early responses to different levels of water deficit in Setaria viridis. Physiology and Molecular Biology of Plants, v. 28, n. 8, p. 1607-1624, 2022.Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 1 |
Biblioteca(s): Embrapa Agroenergia; Embrapa Soja. |
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18. | | BASSO, M. F.; DIAS, B. B. A.; RIBEIRO, A. P.; MARTINS, P. K.; SOUZA, W. R.; OLIVEIRA, N. G. DE.; NAKAYAMA, T. J.; CASARI, R. A das C. N.; SANTIAGO, T. R.; VINECKY, F.; JUNGMANN, L.; SOUSA, C. A. F. de; OLIVEIRA, P. A. de; SOUZA, S. A. C. D. de; CANCADO, G. M. de A.; KOBAYASHI, A. K.; MOLINARI, H. B. C. Improved genetic transformation of sugarcane (Saccharum spp.) embryogenic callus mediated by Agrobacterium tumefaciens. Current Protocols in Plant Biology, v. 2, n. 3, p. 221-239, Sept. 2017.Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 5 |
Biblioteca(s): Embrapa Agricultura Digital; Embrapa Agroenergia. |
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19. | | RIBEIRO, A. P.; VINECKY, F.; DUARTE, K. E.; SANTIAGO, T. R.; CASARI, R. A. das C. N.; HELL, A. F.; DIAS, B. B. A.; MARTINS, P. K.; CENTENO, D. da C.; OLIVEIRA, P. A. de; CANÇADO, G. M. de A.; MAGALHAES, J. V. de; KOBAYASHI, A. K.; SOUZA, W. R. de; MOLINARI, H. B. C. Enhanced aluminum tolerance in sugarcane: evaluation of SbMATE overexpression and genome-wide identification of ALMTs in Saccharum spp. BMC Plant Biology, v. 21, p. 1-15, 2021. Article number: 300.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Agricultura Digital; Embrapa Agroenergia; Embrapa Milho e Sorgo. |
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20. | | NAKAYAMA, T. J.; RODRIGUES, F. A.; NEUMAIER, N.; GOMES, J. M.; MOLINARI, H. B. C.; SANTIAGO, T. R.; FORMIGHIERI, E. F.; BASSO, M. F.; FARIAS, J. R. B.; EMYGDIO, B. M.; OLIVEIRA, A. C. B. de; CAMPOS, A. D.; BORÉM, A.; HARMON, F. G.; MERTZ-HENNING, L. M.; NEPOMUCENO, A. L. Insights into soybean transcriptome reconfiguration under hypoxic stress: Functional, regulatory, structural, and compositional characterization. PLoS ONE, v. 12, n. 11, e0187920, 2017.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
Biblioteca(s): Embrapa Soja. |
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Registros recuperados : 24 | |
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