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Registro Completo |
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Biblioteca(s): |
Embrapa Meio Ambiente. |
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Data corrente: |
04/02/2019 |
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Data da última atualização: |
15/02/2019 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
KAVAMURA, V. N.; HAYAT, R.; CLARK, I. M.; ROSSMANN, M.; MENDES, R.; HIRSCH, P. R.; MAUCHLINE, T. H. |
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Afiliação: |
VANESSA NESSNER KAVAMURA, Rothamsted Research; RIFAT HAYAT, PMAS Arid Agriculture University; IAN MICHAEL CLARK, Rothamsted Research; MAIKE ROSSMANN, FAPESP; RODRIGO MENDES, CNPMA; PENNY R HIRSCH, Rothamsted Research; TIM H MAUCHLINE, Rothamsted Research. |
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Título: |
Inorganic nitrogen application affects both taxonomical and predicted functional structure of wheat rhizosphere bacterial communities. |
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Ano de publicação: |
2018 |
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Fonte/Imprenta: |
Frontiers in Microbiology, Lausanne, v. 9, 2018. Article 1074. |
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Páginas: |
15 p. |
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ISSN: |
1664-302X |
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DOI: |
https://doi.org/10.3389/fmicb.2018.01074 |
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Idioma: |
Inglês |
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Conteúdo: |
The effects of fertilizer regime on bulk soil microbial communities have been well studied, but this is not the case for the rhizosphere microbiome. The aim of this work was to assess the impact of fertilization regime on wheat rhizosphere microbiome assembly and 16S rRNA gene-predicted functions with soil from the long term Broadbalk experiment at Rothamsted Research. Soil from four N fertilization regimes (organic N, zero N, medium inorganic N and high inorganic N) was sown with seeds of Triticum aestivum cv. Cadenza. 16S rRNA gene amplicon sequencing was performed with the Illumina platform on bulk soil and rhizosphere samples of 4-week-old and flowering plants (10 weeks). Phylogenetic and 16S rRNA gene-predicted functional analyses were performed. Fertilization regime affected the structure and composition of wheat rhizosphere bacterial communities. Acidobacteria and Planctomycetes were significantly depleted in treatments receiving inorganic N, whereas the addition of high levels of inorganic N enriched members of the phylum Bacteroidetes, especially after 10 weeks. Bacterial richness and diversity decreased with inorganic nitrogen inputs and was highest after organic treatment (FYM). In general, high levels of inorganic nitrogen fertilizers negatively affect bacterial richness and diversity, leading to a less stable bacterial community structure over time, whereas, more stable bacterial communities are provided by organic amendments. 16S rRNA gene-predicted functional structure was more affected by growth stage than by fertilizer treatment, although, some functions related to energy metabolism and metabolism of terpenoids and polyketides were enriched in samples not receiving any inorganic N, whereas inorganic N addition enriched predicted functions related to metabolism of other amino acids and carbohydrates. Understanding the impact of different fertilizers on the structure and dynamics of the rhizosphere microbiome is an important step toward developing strategies for production of crops in a sustainable way. MenosThe effects of fertilizer regime on bulk soil microbial communities have been well studied, but this is not the case for the rhizosphere microbiome. The aim of this work was to assess the impact of fertilization regime on wheat rhizosphere microbiome assembly and 16S rRNA gene-predicted functions with soil from the long term Broadbalk experiment at Rothamsted Research. Soil from four N fertilization regimes (organic N, zero N, medium inorganic N and high inorganic N) was sown with seeds of Triticum aestivum cv. Cadenza. 16S rRNA gene amplicon sequencing was performed with the Illumina platform on bulk soil and rhizosphere samples of 4-week-old and flowering plants (10 weeks). Phylogenetic and 16S rRNA gene-predicted functional analyses were performed. Fertilization regime affected the structure and composition of wheat rhizosphere bacterial communities. Acidobacteria and Planctomycetes were significantly depleted in treatments receiving inorganic N, whereas the addition of high levels of inorganic N enriched members of the phylum Bacteroidetes, especially after 10 weeks. Bacterial richness and diversity decreased with inorganic nitrogen inputs and was highest after organic treatment (FYM). In general, high levels of inorganic nitrogen fertilizers negatively affect bacterial richness and diversity, leading to a less stable bacterial community structure over time, whereas, more stable bacterial communities are provided by organic amendments. 16S rRNA gene-predicted functional ... Mostrar Tudo |
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Palavras-Chave: |
Nitrogênio inorgânico. |
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Thesagro: |
Fertilizante nitrogenado; Impacto ambiental; Rizosfera; Trigo. |
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Thesaurus Nal: |
Bacterial communities; Environmental impact; Functional diversity; Microbiome; Nitrogen fertilizers; Rhizosphere; Sustainable agricultural intensification; Wheat. |
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Categoria do assunto: |
S Ciências Biológicas |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/191990/1/2018AP49.pdf
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Marc: |
LEADER 03228naa a2200385 a 4500
001 2105404
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008 2018 bl uuuu u00u1 u #d
022 $a1664-302X
024 7 $ahttps://doi.org/10.3389/fmicb.2018.01074$2DOI
100 1 $aKAVAMURA, V. N.
245 $aInorganic nitrogen application affects both taxonomical and predicted functional structure of wheat rhizosphere bacterial communities.$h[electronic resource]
260 $c2018
300 $a15 p.
520 $aThe effects of fertilizer regime on bulk soil microbial communities have been well studied, but this is not the case for the rhizosphere microbiome. The aim of this work was to assess the impact of fertilization regime on wheat rhizosphere microbiome assembly and 16S rRNA gene-predicted functions with soil from the long term Broadbalk experiment at Rothamsted Research. Soil from four N fertilization regimes (organic N, zero N, medium inorganic N and high inorganic N) was sown with seeds of Triticum aestivum cv. Cadenza. 16S rRNA gene amplicon sequencing was performed with the Illumina platform on bulk soil and rhizosphere samples of 4-week-old and flowering plants (10 weeks). Phylogenetic and 16S rRNA gene-predicted functional analyses were performed. Fertilization regime affected the structure and composition of wheat rhizosphere bacterial communities. Acidobacteria and Planctomycetes were significantly depleted in treatments receiving inorganic N, whereas the addition of high levels of inorganic N enriched members of the phylum Bacteroidetes, especially after 10 weeks. Bacterial richness and diversity decreased with inorganic nitrogen inputs and was highest after organic treatment (FYM). In general, high levels of inorganic nitrogen fertilizers negatively affect bacterial richness and diversity, leading to a less stable bacterial community structure over time, whereas, more stable bacterial communities are provided by organic amendments. 16S rRNA gene-predicted functional structure was more affected by growth stage than by fertilizer treatment, although, some functions related to energy metabolism and metabolism of terpenoids and polyketides were enriched in samples not receiving any inorganic N, whereas inorganic N addition enriched predicted functions related to metabolism of other amino acids and carbohydrates. Understanding the impact of different fertilizers on the structure and dynamics of the rhizosphere microbiome is an important step toward developing strategies for production of crops in a sustainable way.
650 $aBacterial communities
650 $aEnvironmental impact
650 $aFunctional diversity
650 $aMicrobiome
650 $aNitrogen fertilizers
650 $aRhizosphere
650 $aSustainable agricultural intensification
650 $aWheat
650 $aFertilizante nitrogenado
650 $aImpacto ambiental
650 $aRizosfera
650 $aTrigo
653 $aNitrogênio inorgânico
700 1 $aHAYAT, R.
700 1 $aCLARK, I. M.
700 1 $aROSSMANN, M.
700 1 $aMENDES, R.
700 1 $aHIRSCH, P. R.
700 1 $aMAUCHLINE, T. H.
773 $tFrontiers in Microbiology, Lausanne$gv. 9, 2018. Article 1074.
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Registro original: |
Embrapa Meio Ambiente (CNPMA) |
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| Registros recuperados : 20 | |
| 8. |  | KAVAMURA, V.; HIRSCH, P. R.; CLARK, I.; ROSSMANN, M.; MENDES, R.; MAUCHLINE, T. Impact of long-term fertilisation regimes on wheat rhizosphere bacterial communities and 16S rRNA gene-predicted functions related to nitrogen and phosphorus metabolism in soils. In: SYMPOSIUM ON BACTERIAL GENETICS AND ECOLOGY, 14., 2017, Aberdeen. Annals... Aberdeen: BAGECO, 2017. p. 121.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 12. | | KAVAMURA, V. N.; HAYAT, R.; CLARK, I. M.; ROSSMANN, M.; MENDES, R.; HIRSCH, P. R.; MAUCHLINE, T. H. Inorganic nitrogen application affects both taxonomical and predicted functional structure of wheat rhizosphere bacterial communities. Frontiers in Microbiology, Lausanne, v. 9, 2018. Article 1074. 15 p.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 13. | | COSTA, L. S. A. S.; FARIA, M. R. de; CHIARAMONTE, J. B.; ROSSMANN, M.; BETTIOL, W.; MENDES, R. Wheat rhizosphere bacterial communities and tolerance against root rot caused by Fusarium graminearum. In: PLANT MICROBIOME SYMPOSIUM, 2., 2018, Amsterdam. [Abstracts...] Amsterdam: Netherlands Institute of Ecology (NIOO-KNAW), 2018. Ref. P11.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 14. | | FARIA, M. R. de; COSTA, L. S. A. S.; CHIARAMONTE, J. B.; ROSSMANN, M.; BETTIOL, W.; MENDES, R. Rhizosphere bacterial communities as a strategy in wheat protection against root rot caused by Bipolaris sorokiniana. In: SIMPÓSIO DE MANEJO DE DOENÇAS DE PLANTAS, 18., 2018, Lavras. Biotecnologia aplicada à fitopatologia: anais... Lavras: NEFIT-UFLA, 2018. p. 173.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 15. | | KAVAMURA, V. N.; ROBINSON, R. J.; HAYAT, R.; CLARK, I. M.; HUGHES, D.; ROSSMANN, M.; HIRSCH, P. R.; MENDES, R.; MAUCHLINE, T. H. Land management and microbial seed load effect on rhizosphere and endosphere bacterial community assembly in wheat. Frontiers in Microbiology, Lausanne, v. 10, 2019. Article 2625.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 16. | | KAVAMURA, V. N.; CLARK, I.; HIRSCH, P. R.; CAULFIELD, J.; SARRIA, A. F.; ROSSMANN, M.; BIRKETT, M.; MELO, I. S. de; MENDES, R.; MAUCHLINE, T. Wheat breeding influences root traits and selection of bacterial communities in the rhizosphere. In: PLANT MICROBIOME SYMPOSIUM, 2., 2018, Amsterdam. [Abstracts...] Amsterdam: Netherlands Institute of Ecology (NIOO-KNAW), 2018.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 17. | | KAVAMURA, V. N.; CLARK, I.; HIRSCH, P. R.; SARRIA, A. F.; MELO, I. S. de; ROSSMANN, M.; MENDES, R.; BIRKETT, M.; MAUCHLINE, T. Wheat breeding and its impact on root exudates and rhizosphere bacterial communities. In: INTERNATIONAL SYMPOSIUM ON MICROBIAL ECOLOGY, 16., 2016, Montreal. Proceedings... Wageningen: The International Society for Microbial Ecology (ISME), 2016. p. 1063.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 18. | | KAVAMURA, V. N.; ROBINSON, R. J.; HUGHES, D.; CLARK, I. M.; ROSSMANN, M.; MELO, I. S. de; HIRSCH, P. R.; MENDES, R.; MAUCHLINE, T. H. Wheat dwarfing influences selection of the rhizosphere microbiome. Scientific Reports, v. 10, Article 1452, 2020.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 19. | | ROSSMANN, M.; PÉREZ-JARAMILLO, J. E.; CHIARAMONTE, J. B.; KAVAMURA, V. N.; DUMACK, K.; FIORE-DONNO, A. M.; MENDES, L. W.; BONKOWSKI, M.; MAUCHLINE, T.; RAAIJMAKERS, J. M.; MENDES, R. Back to the roots: revealing beneficial interactions between the rhizosphere microbiome and wild wheat. In: PLANT MICROBIOME SYMPOSIUM, 2., 2018, Amsterdam. [Abstracts...] Amsterdam: Netherlands Institute of Ecology (NIOO-KNAW), 2018. Ref. P56.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 20. | | ROSSMANN, M; PÉREZ-JARAMILLO, J. E.; KAVAMURA, V. N.; CHIARAMONTE, J. B.; DUMACK, K.; FIORE-DONNO, A. M.; MENDES, L. W.; FERREIRA, M. M. C.; BONKOWSKI, M.; RAAIJMAKERS, J. M.; MAUCHLINE, T. H.; MENDES, R. Multitrophic interactions in the rhizosphere microbiome of wheat: from bacteria and fungi to protists. FEMS Microbiology Ecology, v. 96, n. 4, 2020. Article fiaa032.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| Registros recuperados : 20 | |
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