Consulta: (autoria:"RAAIJMAKERS, J. M.")
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RAAIJMAKERS, J. M.; MENDES, R. Metagenomics of the rhizosphere microbiome: understanding the interplay between the good, the bad and the ugly. 28th New Phytologist Symposium at the Aldemar Paradise Mare Hotel, Rhodes, Greece from 18?21 May 2012.
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/item/81846/1/RA-MendesR-28NewPhytologistSymposium...-Grecia-Metagenomics....pdf
Biblioteca(s): Embrapa Meio Ambiente.

MENDES, R.; RAAIJMAKERS, J. M. Cross-kingdom similarities in microbiome functions. The ISME Journal, London, v. 9, n. 9, p. 1905-1907, 2015.
Biblioteca(s): Embrapa Meio Ambiente.

VOORT, M.; MENDES, R.; RAAIJMAKERS, J. M. Impact of soil heat treatment on bacterial community reassembly in the rhizosphere. In: RHIZOSPHERE, 4., 2015, Maastricht. Stretching the interface of life: abstracts. Maastricht: Wageningen University & Research Centre and the Netherlands Institute of Ecology, 2015. Ref. 149. 302
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/item/138815/1/2015RA-069.pdf
Biblioteca(s): Embrapa Meio Ambiente.

MENDES, R.; GARBEVA, P.; RAAIJMAKERS, J. M. The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms. FEMS Microbiology Reviews, Bethesda, v. 37, n. 5, p. 634-663, 2013.
Biblioteca(s): Embrapa Meio Ambiente.

RAAIJMAKERS, J. M.; SIKORA, R. (ed.). Working Group Multitrophic Interactions in Soil and Integrated Control: Proceedings of the meeting at Wageningen (The Netherlands), 5-8 June, 2005. Dijon: International Organization for Biological and Integrated Control of Noxious Animals and Plants, West Palaearctic Regional Section (IOBC/WPRS), 2006. 197 p. (IOBC/WPRS Bulletin, v. 29, n.2, 2006.
Biblioteca(s): Embrapa Meio Ambiente.

LE, C. N.; MENDES, R.; KRUIJT, M.; RAAIJMAKERS, J. M. Genetic and phenotypic diversity of Sclerotium rolfsii in groundnut fields in Central Vietnam. Plant Disease, Saint Paul, v. 96, n. 3, p. 389-397, 2012.
Biblioteca(s): Embrapa Meio Ambiente.

PÉREZ-JARAMILLO, J. E.; MENDES, R.; RAAIJMAKERS, J. M. Impact of plant domestication on rhizosphere microbiome assembly and functions. Plant Molecular Biology, The Hague, v. 90, n. 6, p. 635-644, 2016.
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/item/142034/1/2015AP56.pdf
Biblioteca(s): Embrapa Meio Ambiente.

PÉREZ-JARAMILLO, J. E.; MENDES, R.; RAAIJMAKERS, J. M. Effect of plant domestication on the rhizosphere microbiome of common bean (Phaseolus vulgaris) . In: RHIZOSPHERE, 4., 2015, Maastricht. Stretching the interface of life: abstracts... Maastricht: Wageningen University & Research Centre and the Netherlands Institute of Ecology, 2015. Ref. 118. 282
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/item/138808/1/2015RA-068.pdf
Biblioteca(s): Embrapa Meio Ambiente.

MENDES, L. W.; MENDES, R.; RAAIJMAKERS, J. M.; TSAI, S. M. Breeding for soil-borne pathogen resistance impacts active rhizosphere microbiome of common bean. The ISME Journal, v. 12, n. 12, p. 3038-3042, 2018.
Biblioteca(s): Embrapa Meio Ambiente.

MENDES, L. W.; MENDES, R.; RAAIJMAKERS, J. M.; TSAI, S. M. Breeding for resistance to soil-borne pathogen impacts rhizosphere microbiome functions in common bean. In: PLANT MICROBIOME SYMPOSIUM, 2., 2018, Amsterdam. [Abstracts...] Amsterdam: Netherlands Institute of Ecology (NIOO-KNAW), 2018. Ref. P39.
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/item/189926/1/RA-MendesR-2nd-PMS-2018-P39..pdf
Biblioteca(s): Embrapa Meio Ambiente.

CHAPELLE, E; MENDES, R.; BAKKER, P. A. H. M.; RAAIJMAKERS, J. M. Fungal invasion of the rhizosphere microbiome. The ISME Journal, London, v. 10, n. 1, p. 265-268, 2016.
Biblioteca(s): Embrapa Meio Ambiente.

CHAPELLE-PINEAU, E.; MENDES, R.; BAKKER, P. A. H. M.; RAAIJMAKERS, J. M. Fungal invasion of the rhizosphere microbiome. In: RHIZOSPHERE, 4., 2015, Maastricht. Stretching the interface of life: abstracts... Maastricht: Wageningen University & Research Centre and the Netherlands Institute of Ecology, 2015. 100
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/item/138844/1/2015RA-070.pdf
Biblioteca(s): Embrapa Meio Ambiente.

CHAPELLE-PINEAU, E; MENDES, R.; BAKKER, P. A. H. M.; RAAIJMAKERS, J. M. Meta-transcriptions of the rhizosphere microbiome: the quest for bacterial genera and traits involved in natural plant protection. In: SYMPOSIUM ON BACTERIAL GENETICS AND ECOLOGY, 12., 2013, Ljubljana (Slovenia). Networking and plasticity of microbial communities: the secret to success. Ljubljana: University of Ljubljana. 2013. p. 69.
URL: https://www.alice.cnptia.embrapa.br/bitstream/doc/956394/1/RAMendesR14ISMEDinamarcaMetatranscriptomics...325A.pdf
Biblioteca(s): Embrapa Meio Ambiente.

CHAPELLE-PINEAU, E.; MENDES, R.; BAKKER, P. A. H. M.; RAAIJMAKERS, J. M. Metatranscriptomics of the rhizosphere microbiome; the quest for bacterial genera and traits involved in natural plant protection. 28th New Phytologist Symposium at the Aldemar Paradise Mare Hotel, Rhodes, Greece from 18?21 May 2012.
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/item/81833/1/RA-MendesR-14ISME-Dinamarca-Metatranscriptomics...325A.pdf
Biblioteca(s): Embrapa Meio Ambiente.

RAAIJMAKERS, J. M.; CHAPELLE-PINEAU, E.; BAKKER, P. A. H. M.; MENDES, R. Metagenomics and metatranscriptomics of the rhizosphere microbiome: understanding the interplay between the good, the bad and the ugly. 14 ISME Dinamarca, 2012
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/item/81829/1/RA-MendesR-14ISME-Dinamarca-Metagenomics-and....pdf
Biblioteca(s): Embrapa Meio Ambiente.

MENDES, L. W.; RAAIJMAKERS, J. M.; HOLLANDER, M. de; MENDES, R.; TSAI, S. M. Impact of resistance breeding on rhizosphere microbiome assembly in common bean. In: SYMPOSIUM ON BACTERIAL GENETICS AND ECOLOGY, 14., 2017, Aberdeen. Annals... Aberdeen: BAGECO, 2017. p. 105
Biblioteca(s): Embrapa Meio Ambiente.

VOORT, M. van der; KEMPENAAR, M.; DRIEL, M.; RAAIJMAKERS, J. M.; MENDES, R. Impact of soil heat on reassembly of bacterial communities in the rhizosphere microbiome and plant disease suppression. Ecology Letters, Oxford, v. 19, n. 4, p. 375-382, 2016.
Biblioteca(s): Embrapa Meio Ambiente.

MENDES, L. W.; RAAIJMAKERS, J. M.; HOLLANDER, M. de; MENDES, R.; TSAI, S. M. Influence of resistance breeding in common bean on rhizosphere microbiome composition and function. The ISME Journal, v. 12, p. 212-224, 2018.
Biblioteca(s): Embrapa Meio Ambiente.

PÉREZ-JARAMILLO, J. E.; CARRION, V. J.; HOLLANDER, M. de; MENDES, R.; RAAIJMAKERS, J. M. The spermosphere effect: building up plant microbiome assembly. In: CONGRESS OF EUROPEAN MICROBIOLOGISTS - FEMS, 7., 2017, Valencia, Spain. Abstract Book... Valencia: Federation of European Microbiological Society (FEMS), 2017. Ref. FEMS7-2470.
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/item/190199/1/RA-MendesR-FEMS-2017-Ref-FEMS7-2470.pdf
Biblioteca(s): Embrapa Meio Ambiente.

BRAGA, L. P.; TANENTZAP, A. J.; LEE, B.; TSAI, S. M.; RAAIJMAKERS, J. M.; MENDES, R.; MENDES, L. W. Diversity of viruses and viroids in the rhizosphere of common bean cultivars differing in resistance to the fungal root pathogen Fusarium oxysporum. Applied Soil Ecology, v. 190, article 105018, 2023.
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1156276/1/Mendes-Diversity-viruses-2023.pdf
Biblioteca(s): Embrapa Meio Ambiente.

VOORT, M. V. D.; SCHMIDT, Y.; WATROUS, J.; MENDES, R.; GROSS, H.; DORRESTEIN, P. C.; RAAIJMAKERS, J. M. Genome mining of the rhizophere bacterium Pseudomonas sp. SH-C52. 14th International Symposium on Microbiol Ecology 19-24 Aug 2012, Bella Center - Copenhagen - Denmark
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/item/81830/1/RA-MendesR-14ISME-Dinamarca-Genome...-175A.pdf
Biblioteca(s): Embrapa Meio Ambiente.

PEREZ-JARAMILLO, J. E.; HOLLANDER, M. de; RAMÍREZ, C. A.; MENDES, R.; RAAIJMAKERS, J. M.; CARRIÓN, V. J. Deciphering rhizosphere microbiome assembly of wild and modern common bean (Phaseolus vulgaris) in native and agricultural soils from Colombia. Microbiome, v. 7, 2019. Article 114.
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/item/205381/1/Mendes-Rhizosphere-Bean-2019.pdf
Biblioteca(s): Embrapa Meio Ambiente.

MENDES, L. W.; CHAVES, M. G. de; FONSECA, M. de C.; MENDES, R.; RAAIJMAKERS, J. M.; TSAI, S. M. Resistance breeding of common bean shapes the physiology of the rhizosphere microbiome. Frontiers in Microbiology, v. 10, 2019. Article 2252.
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/item/205686/1/Mendes-Resistance-Breeding-2019.pdf
Biblioteca(s): Embrapa Meio Ambiente.

MENDES, L. W.; RAAIJMAKERS, J. M.; HOLLANDER, M. de; SEPO, E.; EXPÓSITO, R. G.; CHIORATO, A. F.; MENDES, R.; TSAI, S. M.; CARRIÓN, V. J. Impact of the fungal pathogen Fusarium oxysporum on the taxonomic and functional diversity of the common bean root microbiome. Environmental Microbiome, v. 18, n. 1, article 68, 2023.
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1156506/1/Mendes-Impact-fungal-2023.pdf
Biblioteca(s): Embrapa Meio Ambiente.

MENDES, L. W.; RAAIJMAKERS, J. M.; HOLLANDER, M. DE; SEPO, E.; EXPÓSITO, R. G.; MENDES, R.; TSAI, S. M.; CARRÓN, V. J. Impact of the fungal pathogen Fusarium oxysporum on the taxonomic and functional diversity of the common bean root microbiome. In: PLANT MICROBIOME SYMPOSIUM, 4., 2023, Quito. Abstracts... Quito, Equador: Universidad San Francisco de Quito, 2023. Ref. 2-C. 1 p.
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1162855/1/RA-MendesR-4thPlantMicrobiomeSymposium-2023-Ref2-C.pdf
Biblioteca(s): Embrapa Meio Ambiente.

VOORT, M. van der; MEIJER, H. J. G.; SCHMIDT, Y.; WATROUS, J; DEKKERS, E.; MENDES, R.; DORRESTEIN, P. C; GROSS, H.; RAAIJMAKERS, J. M. Genome mining and metabolic profiling of the rhizosphere bacterium Pseudomonas sp. SH-C52 for antimicrobial compounds. Frontiers in Microbiology, Lausanne, v. 6, 2015. Article 696. 14 p.
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/item/136527/1/2015AP29.pdf
Biblioteca(s): Embrapa Meio Ambiente.

CARRION, V. J.; PÉREZ-JARAMILLO, J.; CORDOVEZ, V.; HOLLANDER, M. de; TRACANNA, V.; MENDES, L. W.; MENDES, R.; MEDEMA, M. H.; RAAIJMAKERS, J. M. Mining of the endophytic microbiome for novel biosynthetic genes and antifungal metabolites. In: PLANT MICROBIOME SYMPOSIUM, 2., 2018, Amsterdam. [Abstracts...] Amsterdam: Netherlands Institute of Ecology (NIOO-KNAW), 2018.
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/item/190146/1/RA-MendesR-2nd-PMS-2018-Mining...metabolites.pdf
Biblioteca(s): Embrapa Meio Ambiente.

ROSSMANN, M.; PÉREZ-JARAMILLO, J. E.; CHIARAMONTE, J. B.; KAVAMURA, V. N.; DUMACK, K.; FIORE-DONNO, A. M.; MENDES, L. W.; BONKOWSKI, M.; MAUCHLINE, T.; RAAIJMAKERS, J. M.; MENDES, R. Back to the roots: revealing beneficial interactions between the rhizosphere microbiome and wild wheat. In: PLANT MICROBIOME SYMPOSIUM, 2., 2018, Amsterdam. [Abstracts...] Amsterdam: Netherlands Institute of Ecology (NIOO-KNAW), 2018. Ref. P56.
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/item/189923/1/RA-MendesR-2nd-PMS-2018-P56.pdf
Biblioteca(s): Embrapa Meio Ambiente.

ROSSMANN, M; PÉREZ-JARAMILLO, J. E.; KAVAMURA, V. N.; CHIARAMONTE, J. B.; DUMACK, K.; FIORE-DONNO, A. M.; MENDES, L. W.; FERREIRA, M. M. C.; BONKOWSKI, M.; RAAIJMAKERS, J. M.; MAUCHLINE, T. H.; MENDES, R. Multitrophic interactions in the rhizosphere microbiome of wheat: from bacteria and fungi to protists. FEMS Microbiology Ecology, v. 96, n. 4, 2020. Article fiaa032.
Biblioteca(s): Embrapa Meio Ambiente.

COSTA, L. S. A. S.; FARIA, M. R. de; CHIARAMONTE, J. B.; MENDES, L. W.; SEPO, E.; HOLLANDER, M. de; FERNANDES, J. M. C.; CARRIÓN, V. J.; BETTIOL, W.; RAAIJMAKERS, J. M.; MENDES, R. Repeated exposure of wheat to the fungal root pathogen Bipolaris sorokiniana affects rhizosphere microbiome assembly and disease suppressiveness. In: PLANT MICROBIOME SYMPOSIUM, 3., 2022, Dundee. Abstracts... Dundee, Scotland: 2022. Ref. S3.1.
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1150580/1/RA-BettiolW-et-al-3rd-Plant-Microbiome-Symposium-Ref-S3.1.pdf
Biblioteca(s): Embrapa Meio Ambiente.

COSTA, L. S. A. S.; FARIA, M. R. de; CHIARAMONTE, J. B.; MENDES, L. W.; SEPO, E.; HOLLANDER, M. de; FERNANDES, J. M. C.; CARRIÓN, V. J.; BETTIOL, W.; MAUCHLINE, T. H.; RAAIJMAKERS, J. M.; MENDES, R. Repeated exposure of wheat to the fungal root pathogen Bipolaris sorokiniana modulates rhizosphere microbiome assembly and disease suppressiveness. Environmental Microbiome, v. 18, n. 1, p., 2023.
URL: https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1160004/1/Bettiol-Repeated-exposure-2023.pdf
Biblioteca(s): Embrapa Meio Ambiente; Embrapa Trigo.

LIU, Y.; BRUIJN, I.; JACK, A. L. H.; DRYNAN, K.; BERG, A. H. van den; THOEN, E.; SANDOVAL-SIERRA, V.; SKAAR, I.; WEST, P. van; DIÉGUEZ-URIBEONDO, J.; VOORT, M. van der; MENDES, R.; MAZOLLA, M.; RAAIJMAKERS, J. M. Deciphering microbial landscapes of fish eggs to mitigate emerging diseases. The ISME Journal, London, v. 8, p. 2002?2014, 2014.
Biblioteca(s): Embrapa Meio Ambiente.

MENDES, R.; KRUIJT, M.; BRUIJN, I. de; DEKKERS, E.; VOORT, M. van der; SCHNEIDER, J. H. M.; PICENO, Y. M.; DESANTIS, T. Z.; ANDERSEN G. L.; BAKKER, P. A. H. M.; RAAIJMAKERS, J. M. Deciphering the rhizosphere microbiome for disease-suppressive bacteria. Science, Washington, DC, v. 332, n. 6033, p. 1097-1100, 2011.
Biblioteca(s): Embrapa Meio Ambiente.

CARRIÓN, V. J.; PEREZ-JARAMILLO, J. E.; CORDOVEZ, V.; TRACANNA, V.; HOLLANDER, M. de; RUIZ-BUCK, D.; MENDES, L. W.; IJCKEN, W. F. J. van; GOMEZ-EXPOSITO, R.; ELSAYED, S. S.; MOHANRAJU, P.; ARIFAH, A.; OOST, J. van der; PAULSON, J. N.; MENDES, R.; WEZEL, G. P. van; MEDEMA, M. H.; RAAIJMAKERS, J. M. Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome. Science, v. 366, n. 6465, p. 606-612, 2019.
Biblioteca(s): Embrapa Meio Ambiente.