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Registro Completo |
Biblioteca(s): |
Embrapa Mandioca e Fruticultura; Embrapa Recursos Genéticos e Biotecnologia. |
Data corrente: |
28/11/2022 |
Data da última atualização: |
06/12/2022 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Autoria: |
PINHEIRO, T. D. M.; REGO, E. C. S.; ALVES, G. S. C.; FONSECA, F. C. de A.; COTTA, M. G.; ANTONINO, J. D.; GOMES, T. G.; AMORIM, E. P.; FERREIRA, C. F.; COSTA, M. M. do C.; GRYNBERG, P.; TOGAWA, R. C.; MILLER, R. N. G. |
Afiliação: |
TATIANA DAVID MIRANDA PINHEIRO, Universidade de Brasília; ERICA CRISTINA SILVA REGO, Universidade de Brasília; GABRIEL SERGIO COSTA ALVES, Universidade de Brasília; FERNANDO CAMPOS DE ASSIS FONSECA, Instituto Federal de Goiás; MICHELLE GUITTON COTTA, Universidade de Brasília; JOSE DIJAIR ANTONINO, Universidade Federal Rural de Pernambuco; TAÍSA GODOY GOMES, Universidade de Brasília; EDSON PERITO AMORIM, CNPMF; CLAUDIA FORTES FERREIRA, CNPMF; MARCOS MOTA DO CARMO COSTA, Cenargen; PRISCILA GRYNBERG, Cenargen; ROBERTO COITI TOGAWA, Cenargen; ROBERT NEIL GERARD MILLER, Universidade de Brasília. |
Título: |
Transcriptome profiling of the resistance response of Musa acuminata subsp. burmannicoides, var. Calcutta 4 to Pseudocercospora musae. |
Ano de publicação: |
2022 |
Fonte/Imprenta: |
International Journal of Molecular Sciences, v. 23, 2022. 13589. |
DOI: |
https://doi.org/10.3390/ijms232113589 |
Idioma: |
Inglês |
Conteúdo: |
Banana (Musa spp.), which is one of the world's most popular and most traded fruits, is highly susceptible to pests and diseases. Pseudocercospora musae, responsible for Sigatoka leaf spot disease, is a principal fungal pathogen of Musa spp., resulting in serious economic damage to cultivars in the Cavendish subgroup. The aim of this study was to characterize genetic components of the early immune response to P. musae in Musa acuminata subsp. burmannicoides, var. Calcutta 4, a resistant wild diploid. Leaf RNA samples were extracted from Calcutta 4 three days after inoculation with fungal conidiospores, with paired-end sequencing conducted in inoculated and non-inoculated controls using lllumina HiSeq 4000 technology. Following mapping to the reference M. acuminata ssp. malaccensis var. Pahang genome, differentially expressed genes (DEGs) were identified and expression representation analyzed on the basis of gene ontology enrichment, Kyoto Encyclopedia of Genes and Genomes orthology and MapMan pathway analysis. Sequence data mapped to 29,757 gene transcript models in the reference Musa genome. A total of 1073 DEGs were identified in pathogen-inoculated cDNA libraries, in comparison to non-inoculated controls, with 32% overexpressed. GO enrichment analysis revealed common assignment to terms that included chitin binding, chitinase activity, pattern binding, oxidoreductase activity and transcription factor (TF) activity. Allocation to KEGG pathways revealed DEGs associated with environmental information processing, signaling, biosynthesis of secondary metabolites, and metabolism of terpenoids and polyketides. With 144 up-regulated DEGs potentially involved in biotic stress response pathways, including genes involved in cell wall reinforcement, PTI responses, TF regulation, phytohormone signaling and secondary metabolism, data demonstrated diverse early-stage defense responses to P. musae. With increased understanding of the defense responses occurring during the incompatible interaction in resistant Calcutta 4, these data are appropriate for the development of effective disease management approaches based on genetic improvement through introgression of candidate genes in superior cultivars. MenosBanana (Musa spp.), which is one of the world's most popular and most traded fruits, is highly susceptible to pests and diseases. Pseudocercospora musae, responsible for Sigatoka leaf spot disease, is a principal fungal pathogen of Musa spp., resulting in serious economic damage to cultivars in the Cavendish subgroup. The aim of this study was to characterize genetic components of the early immune response to P. musae in Musa acuminata subsp. burmannicoides, var. Calcutta 4, a resistant wild diploid. Leaf RNA samples were extracted from Calcutta 4 three days after inoculation with fungal conidiospores, with paired-end sequencing conducted in inoculated and non-inoculated controls using lllumina HiSeq 4000 technology. Following mapping to the reference M. acuminata ssp. malaccensis var. Pahang genome, differentially expressed genes (DEGs) were identified and expression representation analyzed on the basis of gene ontology enrichment, Kyoto Encyclopedia of Genes and Genomes orthology and MapMan pathway analysis. Sequence data mapped to 29,757 gene transcript models in the reference Musa genome. A total of 1073 DEGs were identified in pathogen-inoculated cDNA libraries, in comparison to non-inoculated controls, with 32% overexpressed. GO enrichment analysis revealed common assignment to terms that included chitin binding, chitinase activity, pattern binding, oxidoreductase activity and transcription factor (TF) activity. Allocation to KEGG pathways revealed DEGs associated with... Mostrar Tudo |
Palavras-Chave: |
Pseudocercospora musae; Sigatoka leaf spot. |
Thesagro: |
Musa Acuminata. |
Thesaurus Nal: |
Biotic stress; Disease resistance; Transcriptome. |
Categoria do assunto: |
-- |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1149287/1/ijms-23-13589.pdf
|
Marc: |
LEADER 03314naa a2200349 a 4500 001 2149287 005 2022-12-06 008 2022 bl uuuu u00u1 u #d 024 7 $ahttps://doi.org/10.3390/ijms232113589$2DOI 100 1 $aPINHEIRO, T. D. M. 245 $aTranscriptome profiling of the resistance response of Musa acuminata subsp. burmannicoides, var. Calcutta 4 to Pseudocercospora musae.$h[electronic resource] 260 $c2022 520 $aBanana (Musa spp.), which is one of the world's most popular and most traded fruits, is highly susceptible to pests and diseases. Pseudocercospora musae, responsible for Sigatoka leaf spot disease, is a principal fungal pathogen of Musa spp., resulting in serious economic damage to cultivars in the Cavendish subgroup. The aim of this study was to characterize genetic components of the early immune response to P. musae in Musa acuminata subsp. burmannicoides, var. Calcutta 4, a resistant wild diploid. Leaf RNA samples were extracted from Calcutta 4 three days after inoculation with fungal conidiospores, with paired-end sequencing conducted in inoculated and non-inoculated controls using lllumina HiSeq 4000 technology. Following mapping to the reference M. acuminata ssp. malaccensis var. Pahang genome, differentially expressed genes (DEGs) were identified and expression representation analyzed on the basis of gene ontology enrichment, Kyoto Encyclopedia of Genes and Genomes orthology and MapMan pathway analysis. Sequence data mapped to 29,757 gene transcript models in the reference Musa genome. A total of 1073 DEGs were identified in pathogen-inoculated cDNA libraries, in comparison to non-inoculated controls, with 32% overexpressed. GO enrichment analysis revealed common assignment to terms that included chitin binding, chitinase activity, pattern binding, oxidoreductase activity and transcription factor (TF) activity. Allocation to KEGG pathways revealed DEGs associated with environmental information processing, signaling, biosynthesis of secondary metabolites, and metabolism of terpenoids and polyketides. With 144 up-regulated DEGs potentially involved in biotic stress response pathways, including genes involved in cell wall reinforcement, PTI responses, TF regulation, phytohormone signaling and secondary metabolism, data demonstrated diverse early-stage defense responses to P. musae. With increased understanding of the defense responses occurring during the incompatible interaction in resistant Calcutta 4, these data are appropriate for the development of effective disease management approaches based on genetic improvement through introgression of candidate genes in superior cultivars. 650 $aBiotic stress 650 $aDisease resistance 650 $aTranscriptome 650 $aMusa Acuminata 653 $aPseudocercospora musae 653 $aSigatoka leaf spot 700 1 $aREGO, E. C. S. 700 1 $aALVES, G. S. C. 700 1 $aFONSECA, F. C. de A. 700 1 $aCOTTA, M. G. 700 1 $aANTONINO, J. D. 700 1 $aGOMES, T. G. 700 1 $aAMORIM, E. P. 700 1 $aFERREIRA, C. F. 700 1 $aCOSTA, M. M. do C. 700 1 $aGRYNBERG, P. 700 1 $aTOGAWA, R. C. 700 1 $aMILLER, R. N. G. 773 $tInternational Journal of Molecular Sciences$gv. 23, 2022. 13589.
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Registro original: |
Embrapa Mandioca e Fruticultura (CNPMF) |
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Registros recuperados : 24 | |
1. | | AQUINO, S. O. de; CARNEIRO, F. de A.; RÊGO, E. C. S.; DUARTE, K. E.; ANDRADE, A. C.; MARRACCINI, P. Análise de promotores do gene CcDREBID de Coffea canephora via transformação genética de Nicotiana tabacum. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 9., 2015, Curitiba. Anais... Brasília, DF: Embrapa Café, 2015.Tipo: Artigo em Anais de Congresso |
Biblioteca(s): Embrapa Café. |
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2. | | COTTA, M. G.; MARRACCINI, P.; REGO, E. C. S.; SIDIBE-BOCS, S.; CARNEIRO, F. A.; THIS, D.; ANDRADE, A. C. First step of ABA-mediated response to drought in Coffea. In: In: INTERNATIONAL CONGRESS OF PLANT MOLECULAR BIOLOGY, 11., 2015, Iguassu Falls, Brazil. Book of Abstracts... Rockville, USA: American Society of Plant Biologists, 2015. p. 0881.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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3. | | AQUINO, S. O.; CARNEIRO, FERNANDA A; REGO, E. C. S.; ALVES, G. S. C.; MARRACCINI, P.; ANDRADE, A. C. Functional analysis of different promoter haplotypes of the coffee (Coffea Canephora) CcDREB1D gene through genetic transformation of Nicotiana tabacum. In: INTERNATIONAL CONFERENCE ON COFFE SCIENCE, 26., 2016, China. The programm & abstrcets... China: Asic, 2016. p. 184.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Café. |
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4. | | COSTA, T. S.; CARNEIRO, F. A.; COTTA, M. G.; LIMA, E. A.; RÊGO, E. C. S.; MARRACCINI, P.; ANDRADE, A. C. Analysis of the expression of mannose-6-phosphate reductase gene in roots of different clones of C. canephora subbmited to water deficit. In: INTERNATIONAL CONFERENCE ON COFFE SCIENCE, 26., 2016, China. The programm & abstrcets... China: Asic, 2016. p. 186.Tipo: Artigo em Anais de Congresso |
Biblioteca(s): Embrapa Café. |
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5. | | COSTA, T. S.; MELO, J. A. T.; CARNEIRO, F. A.; VIEIRA, N. G.; RÊGO, E. C. S.; BLOCK JUNIOR, C.; MARRACCINI, P.; ANDRADE, A. C. Drought effects on expression of genes involved in ABA signaling paythway in roots of susceptible and tolerant clones of C. canephora. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 25., 2014, Armenia, Colombia. [Proceedings...]. [Armenia]: ASIC, 2015. p. 42-45.Tipo: Artigo em Anais de Congresso |
Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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6. | | LIMA, E. A. de; REGO, E. C. S.; COTTA, M. G.; COSTA, T. S.; CARNEIRO, F. A.; CARNEIRO, R. M. D. G.; MARRACCINI, P.; ANDRADE, A. C. Differential expression of candidate genes to resistance Tomeloidogyne paranaensis in clones of Coffea canephora. In: INTERNATIONAL CONFERENCE ON COFFE SCIENCE, 26., 2016, China. The programm & abstrcets... China: Asic, 2016. p. 185.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Café. |
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7. | | COTTA, M. G.; RÊGO, E. C. S.; BOCS, S. S.; COSTA, T. S.; DUFAYARD, J-F.; THIS, DOMINIQUE; MARRACCNINI, P.; ANDRADE, A. C. The first step of ABA perception and signal transduction in coffe: evolutionary and expressionof PYR/PYL/RCARs, PP2Cs and SnRK2s genes in C canephora under drought. In: INTERNATIONAL CONFERENCE ON COFFE SCIENCE, 26., 2016, China. The programm & abstrcets... China: Asic, 2016.Tipo: Artigo em Anais de Congresso |
Biblioteca(s): Embrapa Café. |
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8. | | COTTA, M. G.; BOCS, S.; REGO, E. C. S.; COSTA, T. S.; AQUINO, S. O. de; CARNEIRO, F. De A.; THIS, D.; MARRACCINI, P.; ANDRADE, A. C. Estudo das famílias gênicas CcPYL, CcPP2C e CcSnRK2: componentes centrais na via aba-dependente para a resposta ao déficit hídrico em Coffea Canephora. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 9., Curitiba. Brasília, DF: Embrapa Café, 2015.Tipo: Artigo em Anais de Congresso |
Biblioteca(s): Embrapa Café. |
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9. | | AQUINO, S. O. de; CARNEIRO, F. de A.; RÊGO, E. C. S.; ALVES, G. S. C.; MARRACCINI. P.; ANDRADE, A. C. Functional analysis of CcDREB1D promoter region from haplotypes of Coffea canephora through genetic transformation of Nicotiana tabacum. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 25., 2014, Armenia, Colombia. [Proceedings...]. [Armenia]: ASIC, 2015. p. 42-46.Tipo: Artigo em Anais de Congresso |
Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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10. | | COSTA, T. S.; MELO, J. A. T.; CARNEIRO, F. A.; VIEIRA, N. G.; RÊGO, E. C. S.; LIMA, E. A.; COTTA, M. G.; MARRACCINI, P.; ANDRADE, A. C. Expression of candidates genes for drought tolerance related to ABA signaling in roots of C. Canephora. In: CONGRESSO BRASILEIRO DE BIOTECNOLOGIA, 6., 2015, Brasília. [Resumos]. Brasília, DF: Sociedade Brasileira de Biotecnologia, 2015.Tipo: Artigo em Anais de Congresso |
Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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11. | | LIMA, E. A.; CARNEIRO, F. A.; COSTA, T. S.; RÊGO, E. C. S.; JORGE JÚNIOR, A.; FURLANETTO, C.; MARRACCINI, P.; CARNEIRO, R. M. D. G.; ANDRADE, A. C. Molecular characterization of resistance responses of Coffea canephora 'clone 14' upon infection with Meloidogyne paranaensis. Journal of Nematology, v. 46, n. 2, p. 194, June 2014. Edição dos Proceedings do 6th International Congress of Nematology, Cape Town, South Africa, May 2014.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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12. | | LIMA, E. A. de; CARNEIRO, F. de A.; RÊGO, E. C. S.; COSTA, T. S.; COTTA, M. G.; JORGE JÚNIOR, A.; MARRACCINI, P.; CARNEIRO, R. M. D. G.; ANDRADE, A. C. Caracterização molecular e seleção de genes candidatos à resistência do clone 14 de Coffea canephora CONILON A Meloidogyne paranaensis. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 9., 2015, Curitiba. Anais... Brasília, DF: Embrapa Café, 2015.Tipo: Artigo em Anais de Congresso |
Biblioteca(s): Embrapa Café. |
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13. | | DUARTE, K. E.; VIEIRA, N. G.; RÊGO, E. C. S.; MARTINS, P. K.; RIBEIRO, A. P.; CUNHA, B. A. D. B. da; MOLINARI, H. B. C.; KOBAYASHI, A. K.; SOUSA, C. A. de; MARRACCINI, P.; ANDRADE, A. C. Ensaio de déficit hidríco de Setaria viridis transformada com o gene órfão CcUNK8 de Coffea canephora. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 9., 2015, Curitiba. Anais... Brasília, DF: Embrapa Café, 2015.Tipo: Artigo em Anais de Congresso |
Biblioteca(s): Embrapa Café. |
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14. | | CARNEIRO, F. A.; RÊGO, E. C. S.; COSTA, T. S.; OLIVEIRA, S. A.; DUARTE, K. E.; ROCHA, O. C.; RODRIGUES, G. C.; CARVALHO, M. A. F.; BARTHOLO, G. F.; GUERRA, A. F.; MARRACCINI, P.; GRATTAPAGLIA, D.; ANDRADE, A. C. Phenotyping a Coffea canephora population, cultivated at high altitude, aiming at a GWS program for coffee. In: WORKSHOP ON BIOTIC AND ABIOTIC STRESS TOLERANCE IN PLANTS, 2013, Ilheus. The challenge for the 21st century: book of abstracts. Ilhéus: International Advanced Biology Consortium, 2013. p. 35. Resumo S04O01.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Agricultura Digital. |
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15. | | CARNEIRO, F. A.; RÊGO, É. C. S.; COSTA, T. S.; LIMA, E. A.; AQUINO, S. O.; ROCHA, O. C.; RODRIGUES, G. C.; CARVALHO, M. A. F.; BARTHOLO, G. F.; GUERRA, A. F.; MARRACCINI, P.; GRATTAPAGLIA, D.; ANDRADE, A. C. Phenotyping and genotyping a Coffea canephora population, cultivated at high altitude, aiming at a GWS program for coffee. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 25., 2014, Armenia, Colombia. [Proceedings...]. [Armenia]: ASIC, 2015. p. 42-46. PB235.Tipo: Artigo em Anais de Congresso |
Biblioteca(s): Embrapa Agricultura Digital; Embrapa Café; Embrapa Recursos Genéticos e Biotecnologia. |
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16. | | SILVA, L. R. da; MELLO, S. C. M. de; INGLIS, M. C. V.; COSTA, M. M. do C.; SARAIVA, M. A. de P.; RÊGO, E. C. S.; ZACARONI, A. B.; MUNIZ, P. H. P. C.; PAPPAS, M. de C. R. Transcriptional responses and reduction in carpogenic germination of Sclerotinia sclerotiorum exposed to volatile organic compounds of Trichoderma azevedoi. Biological Control, v. 169, 104897, 2022. Na publicação: Maria Cléria Valadares-Inglis.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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17. | | CARNEIRO, F. A.; RÊGO, E. C. S.; COSTA, T. S.; LIMA, E. A. de; OLIVEIRA, S. A.; DUARTE, K. E.; ROCHA, O. C.; RODRIGUES, G. C.; CARVALHO, M. A. F.; BARTHOLO, G. F.; GUERRA, A. F.; MARRACCINI, P.; GRATTAPAGLIA, D.; ANDRADE, A. C. Applied coffee genomics: towards a GWS program. In: WORKSHOP ON BIOTIC AND ABIOTIC STRESS TOLERANCE IN PLANTS, 2013, Ilheus. The challenge for the 21st century: book of abstracts. Ilhéus: International Advanced Biology Consortium, 2013. p. 12. Resumo S01T02.Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Agricultura Digital. |
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18. | | REGO, E. C. S.; PINHEIRO, T. D. M.; FONSECA, F. C. de A.; GOMES, T. G.; COSTA, E. de C.; BASTOS, L. S.; ALVES, G. S. C.; COTTA, M. G.; AMORIM, E. P.; FERREIRA, C. F.; TOGAWA, R. C.; COSTA, M. M. do C.; GRYNBERG, P.; MILLER, R. N. G. Characterization of microRNAs and Target Genes in Musa acuminata subsp. burmannicoides, var. Calcutta 4 during Interaction with Pseudocercospora musae. Plants, v. 12, 1473, 2023.Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 4 |
Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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19. | | CARNEIRO, F. A.; RÊGO, E. C. S.; AQUINO, S. O.; COSTA, T. S.; LIMA, E. A.; RODRIGUES, G. C.; CARVALHO, M. A. de F.; VEIGA, A. D.; GUERRA, A. F.; BARTHOLO, G. F.; SILVA JUNIOR, O. B. da; MARRACCINI, P.; GRATTAPAGLIA, D.; ANDRADE, A. C. Genome wide association study for drough toerance and other agronomic trais of a Coffea canephora opulation. In: THE SOLANACEAE CONFERENCE, 12., 2015. Bourdeaux, France. Book of abstracts... Bourdeaux, France, 2015 p. 59Tipo: Resumo em Anais de Congresso |
Biblioteca(s): Embrapa Café. |
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20. | | CARNEIRO, F. de A.; RÊGO, É. C. S.; AQUINO, S. O. de; COSTA, T. S.; LIMA, E. A. de; ROCHA, O. C.; RODRIGUES, G. C.; CARVALHO, M. A. de F.; MARRACCINI, P.; BARTHOLO, G. F.; GUERRA, A. F.; SILVA JUNIOR, O. B. da; GRATTAPAGLIA, D.; ANDRADE, A. C. Estrutura e diversidade genética de uma população de Coffea canephora conilon utilizando marcadores SNPs identificados por nextRAD. In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 9., 2015, Curitiba. Consórcio pesquisa café: oportunidades e novos desafios: anais. Brasília, DF: Embrapa Café, 2015.Tipo: Artigo em Anais de Congresso |
Biblioteca(s): Embrapa Café. |
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Registros recuperados : 24 | |
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Nenhum registro encontrado para a expressão de busca informada. |
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