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Registro Completo |
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Biblioteca(s): |
Embrapa Mandioca e Fruticultura; Embrapa Recursos Genéticos e Biotecnologia. |
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Data corrente: |
20/07/2011 |
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Data da última atualização: |
15/02/2023 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
CARAZZOLLE, M. F.; RABELLO, F. R.; MARTINS, N. F.; SOUZA, A. A. de; AMARAL, A. M. do; FREITAS-ASTUA, J.; PEREIRA, G. A. G.; MACHADO, M. A.; MEHTA, A. |
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Afiliação: |
Marcelo Falsarella Carazzolle, UNICAMP; Fernanda Rodrigues Rabello, UnB; NATALIA FLORENCIO MARTINS, CENARGEN; Alessandra A. de Souza, APTA; Alexandre M. do Amaral, APTA; JULIANA DE FREITAS ASTUA, CNPMF; Gonçalo A. G. Pereira, UNICAMP; Marcos A. Machado, APTA; ANGELA MEHTA DOS REIS, CENARGEN. |
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Título: |
Identification of defence-related genes expressed in coffee and citrus during infection by Xylella fastidiosa. |
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Ano de publicação: |
2011 |
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Fonte/Imprenta: |
European Journal of Plant Pathology , v. 130, n. 4, p. 529-540, 2011. |
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DOI: |
10.1007/s10658-011-9775-5 |
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Idioma: |
Português |
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Conteúdo: |
One of the phytosanitary problems of coffee cultivation in Brazil is Coffee Leaf Scorch (CLS) disease, caused by the phytopathogenic bacterium Xylella fastidiosa. Due to the economic importance of coffee to Brazil and the losses caused by X. fastidiosa, a cDNA library (RX1) was constructed using infected coffee stems. This library is one of the 37 coffee EST libraries constructed using different organs and tissues and biological conditions (Coffee Genome Project-CafEST). The objective of this study was to identify genes potentially involved in defence processes in response to X. fastidiosa infection by in silico analysis of the transcripts from the RX1 library as well as compare the coffee ESTs to citrus Xylella-infected ESTs. Clustering analysis of the RX1 library grouped a total of 7,501 sequences into 3,248 contigs, 19 of which were not found in the other 36 libraries. Additionally, 119 contigs were considered differentially expressed in comparison with the other libraries and according to statistical criteria. The global analysis of these contigs showed several genes involved in dehydration and photosynthesis. A total of 2,235 singlets were also obtained in the RX1 library and several of these genes are classically involved in defence processes. The comparison to a Xylella-infected citrus EST library revealed several genes similarly modulated in both species, indicating common defence mechanisms in both host plants in response to X. fastidiosa. The results obtained showed that water deprivation and response to osmotic and oxidative stress were expressed in a similar way in both coffee and citrus libraries. This is the first study to propose a common mechanism shared by citrus and coffee plants in response to the same pathogen. MenosOne of the phytosanitary problems of coffee cultivation in Brazil is Coffee Leaf Scorch (CLS) disease, caused by the phytopathogenic bacterium Xylella fastidiosa. Due to the economic importance of coffee to Brazil and the losses caused by X. fastidiosa, a cDNA library (RX1) was constructed using infected coffee stems. This library is one of the 37 coffee EST libraries constructed using different organs and tissues and biological conditions (Coffee Genome Project-CafEST). The objective of this study was to identify genes potentially involved in defence processes in response to X. fastidiosa infection by in silico analysis of the transcripts from the RX1 library as well as compare the coffee ESTs to citrus Xylella-infected ESTs. Clustering analysis of the RX1 library grouped a total of 7,501 sequences into 3,248 contigs, 19 of which were not found in the other 36 libraries. Additionally, 119 contigs were considered differentially expressed in comparison with the other libraries and according to statistical criteria. The global analysis of these contigs showed several genes involved in dehydration and photosynthesis. A total of 2,235 singlets were also obtained in the RX1 library and several of these genes are classically involved in defence processes. The comparison to a Xylella-infected citrus EST library revealed several genes similarly modulated in both species, indicating common defence mechanisms in both host plants in response to X. fastidiosa. The results obtained showe... Mostrar Tudo |
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Palavras-Chave: |
Plant disease. |
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Thesagro: |
Doença de Planta; Xylella Fastidiosa. |
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Categoria do assunto: |
X Pesquisa, Tecnologia e Engenharia |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/38084/1/id27798.pdf
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Marc: |
LEADER 02587naa a2200265 a 4500
001 1901587
005 2023-02-15
008 2011 bl uuuu u00u1 u #d
024 7 $a10.1007/s10658-011-9775-5$2DOI
100 1 $aCARAZZOLLE, M. F.
245 $aIdentification of defence-related genes expressed in coffee and citrus during infection by Xylella fastidiosa.$h[electronic resource]
260 $c2011
520 $aOne of the phytosanitary problems of coffee cultivation in Brazil is Coffee Leaf Scorch (CLS) disease, caused by the phytopathogenic bacterium Xylella fastidiosa. Due to the economic importance of coffee to Brazil and the losses caused by X. fastidiosa, a cDNA library (RX1) was constructed using infected coffee stems. This library is one of the 37 coffee EST libraries constructed using different organs and tissues and biological conditions (Coffee Genome Project-CafEST). The objective of this study was to identify genes potentially involved in defence processes in response to X. fastidiosa infection by in silico analysis of the transcripts from the RX1 library as well as compare the coffee ESTs to citrus Xylella-infected ESTs. Clustering analysis of the RX1 library grouped a total of 7,501 sequences into 3,248 contigs, 19 of which were not found in the other 36 libraries. Additionally, 119 contigs were considered differentially expressed in comparison with the other libraries and according to statistical criteria. The global analysis of these contigs showed several genes involved in dehydration and photosynthesis. A total of 2,235 singlets were also obtained in the RX1 library and several of these genes are classically involved in defence processes. The comparison to a Xylella-infected citrus EST library revealed several genes similarly modulated in both species, indicating common defence mechanisms in both host plants in response to X. fastidiosa. The results obtained showed that water deprivation and response to osmotic and oxidative stress were expressed in a similar way in both coffee and citrus libraries. This is the first study to propose a common mechanism shared by citrus and coffee plants in response to the same pathogen.
650 $aDoença de Planta
650 $aXylella Fastidiosa
653 $aPlant disease
700 1 $aRABELLO, F. R.
700 1 $aMARTINS, N. F.
700 1 $aSOUZA, A. A. de
700 1 $aAMARAL, A. M. do
700 1 $aFREITAS-ASTUA, J.
700 1 $aPEREIRA, G. A. G.
700 1 $aMACHADO, M. A.
700 1 $aMEHTA, A.
773 $tEuropean Journal of Plant Pathology$gv. 130, n. 4, p. 529-540, 2011.
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Registro original: |
Embrapa Recursos Genéticos e Biotecnologia (CENARGEN) |
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| Registros recuperados : 45 | |
| 1. |  | LOURENÇO, R. T.; CUNHA, A. F.; TSUKUMO, F.; PEREIRA, G. A. G.; GRATTAPAGLIA, D. Análise da composição e organização do genoma de Eucalyptus grandis com base em sequenciamento "shotgun" por amostragem ("sample sequencing"). In: ENCONTRO DO TALENTO ESTUDANTIL DA EMBRAPA RECURSOS GENÉTICOS E BIOTECNOLOGIA, 7., 2002, Brasília, DF. Anais: resumos dos trabalhos. Brasília, DF: Embrapa Recursos Genéticos e Biotecnologia, 2002. p. 30.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 2. | | LOURENÇO, R. T.; PAPPAS, G. J.; CUNHA, A. F.; PEREIRA, G. A. G.; GRATTAPAGLIA, D. Estrutura genômica de três megabases de dna genômico "shotgun" de eucalyptus: conteúdo nucleotídico, seouências repetitivas e genes. ENCONTRO DO TALENTO ESTUDANTIL DA EMBRAPA RECURSOS GENETICOS E BIOTECNOLOGIA, 8., 2003, Brasília, DF. Anais: resumos dos trabalhos. Brasília, DF: Embrapa Recursos Genéticos e Biotecnologia, 2003. p. 74| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 4. | | ANDRADE, A. C.; VIEIRA, L. G. E.; COLOMBO, C. A.; PEREIRA, G. A. G. Coffee functional genomics in Brazil. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 21., 2006, Montpellier, France. Table of contents... Montpellier, France: Association for Science and Information on Coffee, 2006.| Tipo: Artigo em Anais de Congresso / Nota Técnica |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 5. | | ANDRADE, A. C.; VIEIRA, L. G. E.; COLOMBO, C. A.; PEREIRA, G. A. G. Coffee functional genomics in Brazil. INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 21., 2006, Montpellier, France. Table of contents... Montpellier, France: Association for Science and Information on Coffee, 2006.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 6. | | BATISTA, A. R. S.; LOURENÇO, R. T.; PEREIRA, G. A. G.; GRATTAPAGLIA, D. Novos microssatélltes para eucalyptus a partir de clones "shotgun". ENCONTRO DO TALENTO ESTUDANTIL DA EMBRAPA RECURSOS GENETICOS E BIOTECNOLOGIA, 8., 2003, Brasília, DF. Anais: resumos dos trabalhos. Brasília, DF: Embrapa Recursos Genéticos e Biotecnologia, 2003. p. 79| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 8. | | IVAMOTO, S. T.; REIS JUNIOR, O.; SAKURAY, L. M.; CARAZZOLLE, M. F.; PEREIRA, G. A. G.; PEREIRA, L. F. P. Transcriptome analysis in leaves, flowers and initial fruit development of Coffea arabica L. In: PLANT & ANIMAL GENOME CONFERENCE INTERNATIONAL, 23., 2015, San Diego, CA. Poster..., 2015.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Café. |
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| 9. | | NASCIMENTO, L. C. do; COSTA, G. G. L.; BINNECK, E.; PEREIRA, G. A. G.; CARAZZOLLE, M. F. A web-based bioinformatics interface applied to the GENOSOJA Project: databases and pipelines. Genetics and Molecular Biology, Ribeirão Preto, v. 35, n. 1, suppl., p. 203-211, May 2012.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Soja. |
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| 10. | | SALAZAR, M. S.; CAMARGO, E. L. O.; DECKMANN, A. C.; CARAZZOLLE, M. F.; LEPIKSON NETO, J.; MEDRANO, F. J.; GRATTAPAGLIA, D.; PEREIRA, G. A. G. Análise do genoma de espécies de eucalipto visando a identificação de genes/metabolismos chave para o incremento da sua produtividade para orientar o seu melhoramento. In: CONGRESSO BRASILEIRO DE GENÉTICA, 54., 2008, Salvador. Resumos... Salvador: SBG, 2008. p. 240. 1 CD-ROM.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 11. | | LOPES, F. R.; ANDRADE, A. C.; MARRACCINI, P.; TEIXEIRA, J. B.; CARAZZOLLE, M. F.; PEREIRA, G. A. G.; CARARETO, C. M. A. Evolutionary changes of the gene expression pattern mediated by exonized transposable element sequences in coffee genomes. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 2010, Bali. Preceedings... [S.l]: Association for Science and Information on Coee (ASIC), 2010. p. 775-779| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 12. | | ROJAS, T. C. G.; MALUTA, R. P.; PARIZZI, L. P.; KOENIGKAN, L. V.; YANG, J.; YU, J.; PEREIRA, G. A. G.; SILVEIRA, W. D. da. Genome sequences of avian pathogenic Escherichia coli strains isolated from Brazilian commercial poultry. Genome Announcements, v. 1, n. 2, p. 1-2, Mar./Apr. 2013. Article e00110-13.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 13. | | SOARES-CAVALCANTI, N. M.; BELARMINO, L. C.; KIDO, E. A.; PANDOLFI, V.; MARCELINO-GUIMARÃES, F. C.; RODRIGUES, F. A.; PEREIRA, G. A. G.; BENKO-ISEPPON, A. M. Overall picture of expressed Heat Shock Factors in Glycine max, Lotus japonicus and Medicago truncatula. Genetics and Molecular Biology, Ribeirão Preto, v. 35, n. 1, suppl., p. 247-259, May 2012.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Soja. |
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| 14. | | VIDAL, R.; LEROY, L.; BELLIS, F. de; POT, D.; RODRIGUES, G. C.; PEREIRA, G. A. G.; ANDRADE, A. C.; MARRACCINI, P. High-throughput sequencing of cDNA extracted from meristems of Coffea arabica cv. Rubi and Iapar59 submitted to different water field conditions. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 2010, Bali. Preceedings... [S.l]: Association for Science and Information on Coee (ASIC), 2010. p. 708-712| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 15. | | VIDAL, R. O.; ALEKCEVETCH, J. C.; LEROY, T.; DE BELLIS, F.; POT, D.; RODRIGUES, G. C.; CARAZZOLLE, M. F.; PEREIRA, G. A. G.; ANDRADE, A. C.; MARRACCINI, P. High-through put sequencing of CDNA shows that CV. Rubi and IAPAR59 of Coffea Arabica have different molecular response to water privation. In: INTERNATIONAL CONFERENCE ON COFFEE SCIENCE, 2012, San José. Proceedings... [S.l]: Association for Science and Information on Coffee (ASIC), 2012. p. 61.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Recursos Genéticos e Biotecnologia. |
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| 16. | | YUYAMA, P. M.; REIS JUNIOR, O.; IVAMOTO, S. T.; DOMINGUES, D. S.; CARAZZOLLE, M. F.; PEREIRA, G. A. G.; CHARMETANT, P.; LEROY, T.; PEREIRA, L. F. P. Transcriptome analysis in Coffea eugenioides, an Arabica coffee ancestor, reveals differentially expressed genes inleaves and fruits. Molecular Genetics and Genomics, v. 291, n. 1, p. 323-336. 2016| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Café. |
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| 17. | | NASCIMENTO, L. C.; COSTA, G. G. L.; VIDAL, R. O.; MEYER, L.; BINNECK, E.; KIDO, E. A.; RODRIGUES, F.; KULCHESKI, F. R.; NEPOMUCENO, A. L.; ABDELNOOR, R. V.; PEREIRA, G. A. G.; CARAZZOLLE, M. F. Bioinformatics analysis applied to genosoja project. In: INTERNATIONAL CONFERENCE OF THE BRAZILIAN ASSOCIATION FOR BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 5., 2009, Angra dos Reis. Abstracts book ... Rio de Janeiro: AB3C, 2009. p. 22. X-Meeting 2009.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Soja. |
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| 18. | | NASCIMENTO, L. C.; COSTA, G. G. L.; MEYER, L.; BINNECK, E.; RODRIGUES, F.; KULCHESKI, F. R.; MARGIS, R.; KIDO, E. A.; MARCELINO, F. C.; NEPOMUCENO, A. L.; ABDELNOOR, R. V.; PEREIRA, G. A. G.; CARAZZOLLE, M. F. A brazilian soybean database. In: INTERNATIONAL CONFERENCE OF THE BRAZILIAN ASSOCIATION FOR BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 6., 2010, Ouro Preto. Abstracts book... Ouro Preto: AB3C, 2010. p. 120. X-Meeting 2010.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Soja. |
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| 19. | | PEREIRA, J. F.; ALMEIDA, A. P. M. M.; COTA, J.; PAMPHILE, J. A.; SILVA, G. F. da; ARAUJO, E. F. de; GRAMACHO, K. P.; BROMMONSCHENKEL, S. H.; PEREIRA, G. A. G.; QUEIROZ, M. V. de. Boto, a class II transposon in Moniliophthora perniciosa, is the first representative of the PIF/Harbinger superfamily in a phytopathogenic fungus. Microbiology, Reading, v. 159, p. 112-125, Jan. 2013.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Amazônia Ocidental; Embrapa Trigo. |
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| 20. | | LOUZADA, G. A. S.; BANDEIRA, L. F.; BRONDANI, R. P. V.; TRIGUEIRO, E. L.; MIRANDA, D. D.; PAULA, D. P. COELHO, A. S. G.; BROMMONSCHENKEL, S. H.; PEREIRA, G. A. G.; GRATTAPAGLIA, D. Caracterização genômica de Eucalyptus através do seqüenciamento de pontas de BACs. In: CONGRESSO BRASILEIRO DE GENÉTICA, 51., 2005, Águas de Lindóia, SP. A era da genômica: da bioestatística à bioinformática: anais. Ribeirão Preto, SP: Sociedade Brasileira de Genética, 2005. p. 597.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| Registros recuperados : 45 | |
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| Nenhum registro encontrado para a expressão de busca informada. |
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