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Registro Completo |
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Biblioteca(s): |
Embrapa Gado de Corte. |
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Data corrente: |
22/02/2018 |
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Data da última atualização: |
22/02/2018 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
MARTUSCELLO, J. A.; BRAZ, T. G. dos S.; JANK, L.; CUNHA, D. de N. F. V. da; SOUZA, M. W. M.; BRITO, G. F. de; OLIVEIRA, L. P. de. |
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Afiliação: |
Janaina Azevedo Martuscello, Universidade Federal de São João Del Rei; Thiago Gomes dos Santos Braz, Universidade Federal de Viçosa; LIANA JANK, CNPGC; Daniel de Noronha Figueiredo Vieira da Cunha, Universidade Federal de São João Del Rei; Madson Williame Melo Souza, Universidade Federal de Viçosa; Gerlane Ferreira de Brito, Universidade Federal de Alagoas; Leandro Pereira de Oliveira, Universidade Federal de Alagoas. |
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Título: |
Repeatability of agronomic characters in Brachiaria brizantha cultivars. |
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Ano de publicação: |
2013 |
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Fonte/Imprenta: |
Revista Brasileira de Zootecnia, v. 42, n. 1, p. 30-35, 2013 |
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Idioma: |
Inglês |
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Conteúdo: |
This experiment was carried out with the objectives of determining repeatability coefficients, the number of harvests necessary to increase accuracy and the genotypic stability of yield characteristics in Brachiaria brizantha cultivars in the northeast region of Brazil in the period from July 2009 to March 2011. The experimental design used was completely randomized with three treatments (Brachiaria brizantha var. Marandu, Xaraés and Piatã) and three replications. Each plot was harvested seven times: five in the rainy season and two in the dry season. Immediately after each harvest, the forage was weighed and dried to obtain total, stem, leaf and dead dry matter yields. For the estimation of the repeatability coefficient, analysis of variance, principal components (correlation and covariance matrices) and structural analyses were used. The repeatability coefficients (r) obtained by the different methods, for all characteristics evaluated, varied from 0.009 to 0.837. The estimates of the repeatability coefficients obtained for all characteristics evaluated by the method of analyses of variance were almost always lower than those obtained by the other methods. By the principal components method (based on the covariance matrix), the estimates were always higher than those from other methods. Considering that levels of 80 or 90% confidence are satisfactory in the evaluation of the relative superiority of the cultivars for all the evaluated characteristics, with the exception of dead matter yield, the seven harvests are sufficient for the choice of the best cultivar to be used in the northeast region of Brazil. MenosThis experiment was carried out with the objectives of determining repeatability coefficients, the number of harvests necessary to increase accuracy and the genotypic stability of yield characteristics in Brachiaria brizantha cultivars in the northeast region of Brazil in the period from July 2009 to March 2011. The experimental design used was completely randomized with three treatments (Brachiaria brizantha var. Marandu, Xaraés and Piatã) and three replications. Each plot was harvested seven times: five in the rainy season and two in the dry season. Immediately after each harvest, the forage was weighed and dried to obtain total, stem, leaf and dead dry matter yields. For the estimation of the repeatability coefficient, analysis of variance, principal components (correlation and covariance matrices) and structural analyses were used. The repeatability coefficients (r) obtained by the different methods, for all characteristics evaluated, varied from 0.009 to 0.837. The estimates of the repeatability coefficients obtained for all characteristics evaluated by the method of analyses of variance were almost always lower than those obtained by the other methods. By the principal components method (based on the covariance matrix), the estimates were always higher than those from other methods. Considering that levels of 80 or 90% confidence are satisfactory in the evaluation of the relative superiority of the cultivars for all the evaluated characteristics, with the exception of ... Mostrar Tudo |
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Palavras-Chave: |
Criação forrageira; Forage breeding; Produção forrageira; Selection. |
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Thesagro: |
Forragem; Materia seca; Seleção. |
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Thesaurus Nal: |
Forage production. |
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Categoria do assunto: |
-- |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/172994/1/46-Repeatability-of-agronomic-characters-in-Brachiaria-brizantha-cultivars-2013.pdf
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Marc: |
LEADER 02466naa a2200289 a 4500
001 2088045
005 2018-02-22
008 2013 bl uuuu u00u1 u #d
100 1 $aMARTUSCELLO, J. A.
245 $aRepeatability of agronomic characters in Brachiaria brizantha cultivars.$h[electronic resource]
260 $c2013
520 $aThis experiment was carried out with the objectives of determining repeatability coefficients, the number of harvests necessary to increase accuracy and the genotypic stability of yield characteristics in Brachiaria brizantha cultivars in the northeast region of Brazil in the period from July 2009 to March 2011. The experimental design used was completely randomized with three treatments (Brachiaria brizantha var. Marandu, Xaraés and Piatã) and three replications. Each plot was harvested seven times: five in the rainy season and two in the dry season. Immediately after each harvest, the forage was weighed and dried to obtain total, stem, leaf and dead dry matter yields. For the estimation of the repeatability coefficient, analysis of variance, principal components (correlation and covariance matrices) and structural analyses were used. The repeatability coefficients (r) obtained by the different methods, for all characteristics evaluated, varied from 0.009 to 0.837. The estimates of the repeatability coefficients obtained for all characteristics evaluated by the method of analyses of variance were almost always lower than those obtained by the other methods. By the principal components method (based on the covariance matrix), the estimates were always higher than those from other methods. Considering that levels of 80 or 90% confidence are satisfactory in the evaluation of the relative superiority of the cultivars for all the evaluated characteristics, with the exception of dead matter yield, the seven harvests are sufficient for the choice of the best cultivar to be used in the northeast region of Brazil.
650 $aForage production
650 $aForragem
650 $aMateria seca
650 $aSeleção
653 $aCriação forrageira
653 $aForage breeding
653 $aProdução forrageira
653 $aSelection
700 1 $aBRAZ, T. G. dos S.
700 1 $aJANK, L.
700 1 $aCUNHA, D. de N. F. V. da
700 1 $aSOUZA, M. W. M.
700 1 $aBRITO, G. F. de
700 1 $aOLIVEIRA, L. P. de
773 $tRevista Brasileira de Zootecnia$gv. 42, n. 1, p. 30-35, 2013
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Registro original: |
Embrapa Gado de Corte (CNPGC) |
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Registro Completo
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Biblioteca(s): |
Embrapa Cerrados. |
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Data corrente: |
24/08/2018 |
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Data da última atualização: |
20/11/2018 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
SOUZA, L. M. de; SANTOS, L. H. B. dos; ROSA, J. R. B. F.; SILVA, C. C. da; MANTELLO, C. C.; CONSON, A. R. O.; SCALOPPI JUNIOR, E. J.; FIALHO, J. de F.; MORAES, M. L. T. de; GONÇALVES, P. de S.; MARGARIDO, G. R. A.; GARCIA, A. A. F.; LE GUEN, V.; SOUZA, A. P. de. |
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Afiliação: |
LIVIA M. DE SOUZA, UNICAMP; LUCIANO H. B. DOS SANTOS, UNICAMP; JOÃO R. B. F. ROSA, USP/ESALQ; CARLA C. DA SILVA, UNICAMP; CAMILA C. MANTELLO, UNICAMP; ANDRE R. O. CONSON, UNICAMP; ERIVALDO J. SCALOPPI JUNIOR, IAC; JOSEFINO DE FREITAS FIALHO, CPAC; MARIO LUIZ T. DE MORAES, UNESP; PAULO DE S. GONÇALVES, IAC; GABRIEL R. A. MARGARIDO, USP/ESALQ; ANTONIO A. F. GARCIA, USP/ESALQ; VINCENT LE GUEN, CIRAD; ANETE P. DE SOUZA, UNICAMP. |
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Título: |
Linkage disequilibrium and population structure in wild and cultivated populations of rubber tree (Hevea brasiliensis). |
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Ano de publicação: |
2018 |
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Fonte/Imprenta: |
Frontiers in Plant Science, v. 9, article 815, 03 July 2018. |
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DOI: |
https://doi.org/10.3389/fpls.2018.00815 |
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Idioma: |
Inglês |
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Conteúdo: |
Abstract: Among rubber tree species, which belong to the Hevea genus of the Euphorbiaceae family, Hevea brasiliensis (Willd. ex Adr.de Juss.) Muell. Arg. is the main commercial source of natural rubber production worldwide. Knowledge of the population structure and linkage disequilibrium (LD) of this species is essential for the efficient organization and exploitation of genetic resources. Here, we obtained single-nucleotide polymorphisms (SNPs) using a genotyping-by-sequencing (GBS) approach and then employed the SNPs for the following objectives: (i) to identify the positions of SNPs on a genetic map of a segregating mapping population, (ii) to evaluate the population structure of a germplasm collection, and (iii) to detect patterns of LD decay among chromosomes for future genetic association studies in rubber tree. A total of 626 genotypes, including both germplasm accessions (368) and individuals from a genetic mapping population (254), were genotyped. A total of 77,660 and 21,283 SNPs were detected by GBS in the germplasm and mapping populations, respectively. The mapping population, which was previously mapped, was constructed with 1,062 markers, among which only 576 SNPs came from GBS, reducing the average interval between two adjacent markers to 4.4 cM. SNPs from GBS genotyping were used for the analysis of genetic structure and LD estimation in the germplasm accessions. Two groups, which largely corresponded to the cultivated and wild populations, were detected using STRUCTURE and via principal coordinate analysis. LD analysis, also using the mapped SNPs, revealed that non-random associations varied along chromosomes, with regions of high LD interspersed with regions of low LD. Considering the length of the genetic map (4,693 cM) and the mean LD (0.49 for cultivated and 0.02 for wild populations), a large number of evenly spaced SNPs would be needed to perform genome-wide association studies in rubber tree, and the wilder the genotypes used, the more difficult the mapping saturation. MenosAbstract: Among rubber tree species, which belong to the Hevea genus of the Euphorbiaceae family, Hevea brasiliensis (Willd. ex Adr.de Juss.) Muell. Arg. is the main commercial source of natural rubber production worldwide. Knowledge of the population structure and linkage disequilibrium (LD) of this species is essential for the efficient organization and exploitation of genetic resources. Here, we obtained single-nucleotide polymorphisms (SNPs) using a genotyping-by-sequencing (GBS) approach and then employed the SNPs for the following objectives: (i) to identify the positions of SNPs on a genetic map of a segregating mapping population, (ii) to evaluate the population structure of a germplasm collection, and (iii) to detect patterns of LD decay among chromosomes for future genetic association studies in rubber tree. A total of 626 genotypes, including both germplasm accessions (368) and individuals from a genetic mapping population (254), were genotyped. A total of 77,660 and 21,283 SNPs were detected by GBS in the germplasm and mapping populations, respectively. The mapping population, which was previously mapped, was constructed with 1,062 markers, among which only 576 SNPs came from GBS, reducing the average interval between two adjacent markers to 4.4 cM. SNPs from GBS genotyping were used for the analysis of genetic structure and LD estimation in the germplasm accessions. Two groups, which largely corresponded to the cultivated and wild populations, were detected usin... Mostrar Tudo |
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Thesagro: |
Comportamento de Variedade; Hevea Brasiliensis; População de Planta; Seringueira; Variação Genética. |
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Categoria do assunto: |
G Melhoramento Genético |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/181926/1/DL-Hevea-brasiliensis-Livia-public-Frontiers-3.07.2018apagar.pdf
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Marc: |
LEADER 03139naa a2200349 a 4500
001 2094508
005 2018-11-20
008 2018 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.3389/fpls.2018.00815$2DOI
100 1 $aSOUZA, L. M. de
245 $aLinkage disequilibrium and population structure in wild and cultivated populations of rubber tree (Hevea brasiliensis).$h[electronic resource]
260 $c2018
520 $aAbstract: Among rubber tree species, which belong to the Hevea genus of the Euphorbiaceae family, Hevea brasiliensis (Willd. ex Adr.de Juss.) Muell. Arg. is the main commercial source of natural rubber production worldwide. Knowledge of the population structure and linkage disequilibrium (LD) of this species is essential for the efficient organization and exploitation of genetic resources. Here, we obtained single-nucleotide polymorphisms (SNPs) using a genotyping-by-sequencing (GBS) approach and then employed the SNPs for the following objectives: (i) to identify the positions of SNPs on a genetic map of a segregating mapping population, (ii) to evaluate the population structure of a germplasm collection, and (iii) to detect patterns of LD decay among chromosomes for future genetic association studies in rubber tree. A total of 626 genotypes, including both germplasm accessions (368) and individuals from a genetic mapping population (254), were genotyped. A total of 77,660 and 21,283 SNPs were detected by GBS in the germplasm and mapping populations, respectively. The mapping population, which was previously mapped, was constructed with 1,062 markers, among which only 576 SNPs came from GBS, reducing the average interval between two adjacent markers to 4.4 cM. SNPs from GBS genotyping were used for the analysis of genetic structure and LD estimation in the germplasm accessions. Two groups, which largely corresponded to the cultivated and wild populations, were detected using STRUCTURE and via principal coordinate analysis. LD analysis, also using the mapped SNPs, revealed that non-random associations varied along chromosomes, with regions of high LD interspersed with regions of low LD. Considering the length of the genetic map (4,693 cM) and the mean LD (0.49 for cultivated and 0.02 for wild populations), a large number of evenly spaced SNPs would be needed to perform genome-wide association studies in rubber tree, and the wilder the genotypes used, the more difficult the mapping saturation.
650 $aComportamento de Variedade
650 $aHevea Brasiliensis
650 $aPopulação de Planta
650 $aSeringueira
650 $aVariação Genética
700 1 $aSANTOS, L. H. B. dos
700 1 $aROSA, J. R. B. F.
700 1 $aSILVA, C. C. da
700 1 $aMANTELLO, C. C.
700 1 $aCONSON, A. R. O.
700 1 $aSCALOPPI JUNIOR, E. J.
700 1 $aFIALHO, J. de F.
700 1 $aMORAES, M. L. T. de
700 1 $aGONÇALVES, P. de S.
700 1 $aMARGARIDO, G. R. A.
700 1 $aGARCIA, A. A. F.
700 1 $aLE GUEN, V.
700 1 $aSOUZA, A. P. de
773 $tFrontiers in Plant Science$gv. 9, article 815, 03 July 2018.
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