| |
|
|
|
Registro Completo |
|
Biblioteca(s): |
Embrapa Caprinos e Ovinos; Embrapa Meio-Norte. |
|
Data corrente: |
21/11/2018 |
|
Data da última atualização: |
06/08/2019 |
|
Tipo da produção científica: |
Comunicado Técnico/Recomendações Técnicas |
|
Autoria: |
SALLES, H. O.; POMPEU, R. C. F. F.; VIEIRA, L. da S.; CAVALCANTE, A. C. R.; SOUZA, H. A. de; GUEDES, F. L.; OLIVEIRA, E. L. de; DIAS, M. V.; MENDES, M. E. P.; XIMENES, L. V. |
|
Afiliação: |
HEVILA OLIVEIRA SALLES, CNPC; ROBERTO CLAUDIO FERNANDES F POMPEU, CNPC; LUIZ DA SILVA VIEIRA, CNPC; ANTONIO CEZAR ROCHA CAVALCANTE, CNPC; HENRIQUE ANTUNES DE SOUZA, CPAMN; FERNANDO LISBOA GUEDES, CNPC; EDUARDO LUIZ DE OLIVEIRA, CNPC; MAIRA VERGNE DIAS, CNPC; MANOEL EVERARDO PEREIRA MENDES, CNPC; LIDIANE VIANA XIMENES, CNPC. |
|
Título: |
Econemat® Estratégia de controle da fase de vida livre de nematoides gastrintestinais de pequenos ruminantes no solo. |
|
Ano de publicação: |
2018 |
|
Fonte/Imprenta: |
Sobral: Embrapa Caprinos e Ovinos, 2018. |
|
Páginas: |
10 f. |
|
Série: |
(Embrapa Caprinos e Ovinos. Comunicado Técnico, 173). |
|
Idioma: |
Português |
|
Notas: |
[HEVILA OLIVEIRA SALLES FIGUEIREDO]. |
|
Conteúdo: |
Produzir novos insumos e de estratégias de baixo impacto ambiental para controle da verminose se mostram como as principais demandas do setor para reduzir a perda de animais e a presença de resíduos químicos nos produtos de origem animal e no ambiente. |
|
Palavras-Chave: |
Econemat. |
|
Thesagro: |
Controle Integrado; Haemonchus Contortus; Helminto Gastrintestinal; Manejo do Solo; Nematóide; Parasitismo; Parasito de Animal; Parasitose; Verminose. |
|
Thesaurus Nal: |
Animal parasitic nematodes; Brazil; Gastrointestinal nematodes; Nematoda; Nematode control; Parasitism; Parasitoses; Soil management. |
|
Categoria do assunto: |
H Saúde e Patologia |
|
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/200323/1/CNPC-2018-COT-173.pdf
|
|
Marc: |
LEADER 01647nam a2200469 a 4500
001 2099750
005 2019-08-06
008 2018 bl uuuu u0uu1 u #d
100 1 $aSALLES, H. O.
245 $aEconemat® Estratégia de controle da fase de vida livre de nematoides gastrintestinais de pequenos ruminantes no solo.$h[electronic resource]
260 $aSobral: Embrapa Caprinos e Ovinos$c2018
300 $a10 f.
490 $a(Embrapa Caprinos e Ovinos. Comunicado Técnico, 173).
500 $a[HEVILA OLIVEIRA SALLES FIGUEIREDO].
520 $aProduzir novos insumos e de estratégias de baixo impacto ambiental para controle da verminose se mostram como as principais demandas do setor para reduzir a perda de animais e a presença de resíduos químicos nos produtos de origem animal e no ambiente.
650 $aAnimal parasitic nematodes
650 $aBrazil
650 $aGastrointestinal nematodes
650 $aNematoda
650 $aNematode control
650 $aParasitism
650 $aParasitoses
650 $aSoil management
650 $aControle Integrado
650 $aHaemonchus Contortus
650 $aHelminto Gastrintestinal
650 $aManejo do Solo
650 $aNematóide
650 $aParasitismo
650 $aParasito de Animal
650 $aParasitose
650 $aVerminose
653 $aEconemat
700 1 $aPOMPEU, R. C. F. F.
700 1 $aVIEIRA, L. da S.
700 1 $aCAVALCANTE, A. C. R.
700 1 $aSOUZA, H. A. de
700 1 $aGUEDES, F. L.
700 1 $aOLIVEIRA, E. L. de
700 1 $aDIAS, M. V.
700 1 $aMENDES, M. E. P.
700 1 $aXIMENES, L. V.
Download
Esconder MarcMostrar Marc Completo |
|
Registro original: |
Embrapa Caprinos e Ovinos (CNPC) |
|
|
Biblioteca |
ID |
Origem |
Tipo/Formato |
Classificação |
Cutter |
Registro |
Volume |
Status |
URL |
Voltar
|
|
|
Registro Completo
|
Biblioteca(s): |
Embrapa Recursos Genéticos e Biotecnologia. |
|
Data corrente: |
26/03/2019 |
|
Data da última atualização: |
21/06/2022 |
|
Tipo da produção científica: |
Resumo em Anais de Congresso |
|
Autoria: |
PESSOA FILHO, M. A. C. de P.; SOUZA SOBRINHO, F. de; FRAGOSO, R. da R.; SILVA JUNIOR, O. B. da; FERREIRA, M. E. |
|
Afiliação: |
MARCO AURELIO CALDAS DE PINHO PESSO, CPAC; FAUSTO DE SOUZA SOBRINHO, CNPGL; RODRIGO DA ROCHA FRAGOSO, CPAC; ORZENIL BONFIM DA SILVA JUNIOR, Cenargen; MARCIO ELIAS FERREIRA, Cenargen. |
|
Título: |
A phased diploid genome assembly for the forage grass urochloa ruziziensis based on single-molecule real-time sequencing. |
|
Ano de publicação: |
2019 |
|
Fonte/Imprenta: |
In: PLANT AND ANIMAL GENOME CONFERENCE, 27., 2019, San Diego. Proceedings... Livingston, NJ: Scherago, 2019 |
|
Idioma: |
Inglês |
|
Notas: |
Plant and Animal Genome XXVII Conference (PAG). |
|
Conteúdo: |
Ruzigrass (Urochloa ruziziensis) is a diploid, tropical forage grass native to Africa, widely planted in Brazil, known for its high nutritional quality. It is closely related to important forage species of Urochloa, and plays a crucial role in the breeding program of brachiaria grasses, mostly focused on inter-specific hybirds. Previous studies from our group based on shallow Illumina sequencing resulted in the development of the first molecular markers for the species (Silva et al., 2013), as well as in assessments of germplasm diversity and structure (Pessoa-Filho et al., 2015). Assembly and analysis of complete plastid genomes for four Urochloa species allowed the characterization of their phylogenetic divergence (Pessoa-Filho et al., 2017). Here, we present a near-complete phased diploid genome assembly of the heterozygous ruzigrass clone C69. We used PacBio Sequel to generate over 13.3 million long reads (mean size 6.5 kbp), adding up to 87.5 Gbp of raw data (~142x coverage). The current diploid assembly using FALCON-Unzip contains ~603 Mbp in 3,539 primary contigs, with NG50 of 286 kbp, and covers 98.2% of the estimated haploid genome size of 615 Mbp for ruzigrass. In addition, 82% of the assembly could be phased as separate haplotypes, with ~500 Mbp resolved as haplotigs. Assessment of assembly completeness showed 95.2% BUSCO matches as complete, and 83.3% as complete single-copy. Ongoing research includes transcriptome assembly to aid gene prediction and annotation, anchoring of contigs in linkage maps, and Hi-C scaffolding. A high-quality, chromosome-scale genome assembly for ruzigrass will aid research groups in the development and application of genomic tools in breeding and genetics of brachiaria grasses. MenosRuzigrass (Urochloa ruziziensis) is a diploid, tropical forage grass native to Africa, widely planted in Brazil, known for its high nutritional quality. It is closely related to important forage species of Urochloa, and plays a crucial role in the breeding program of brachiaria grasses, mostly focused on inter-specific hybirds. Previous studies from our group based on shallow Illumina sequencing resulted in the development of the first molecular markers for the species (Silva et al., 2013), as well as in assessments of germplasm diversity and structure (Pessoa-Filho et al., 2015). Assembly and analysis of complete plastid genomes for four Urochloa species allowed the characterization of their phylogenetic divergence (Pessoa-Filho et al., 2017). Here, we present a near-complete phased diploid genome assembly of the heterozygous ruzigrass clone C69. We used PacBio Sequel to generate over 13.3 million long reads (mean size 6.5 kbp), adding up to 87.5 Gbp of raw data (~142x coverage). The current diploid assembly using FALCON-Unzip contains ~603 Mbp in 3,539 primary contigs, with NG50 of 286 kbp, and covers 98.2% of the estimated haploid genome size of 615 Mbp for ruzigrass. In addition, 82% of the assembly could be phased as separate haplotypes, with ~500 Mbp resolved as haplotigs. Assessment of assembly completeness showed 95.2% BUSCO matches as complete, and 83.3% as complete single-copy. Ongoing research includes transcriptome assembly to aid gene prediction and annotation, ... Mostrar Tudo |
|
Palavras-Chave: |
Brasil. |
|
Thesagro: |
Capim Urochloa; Genoma. |
|
Categoria do assunto: |
K Ciência Florestal e Produtos de Origem Vegetal |
|
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/194810/1/abstract-PAG-XXVII.pdf
|
|
Marc: |
LEADER 02499nam a2200205 a 4500
001 2107476
005 2022-06-21
008 2019 bl uuuu u01u1 u #d
100 1 $aPESSOA FILHO, M. A. C. de P.
245 $aA phased diploid genome assembly for the forage grass urochloa ruziziensis based on single-molecule real-time sequencing.$h[electronic resource]
260 $aIn: PLANT AND ANIMAL GENOME CONFERENCE, 27., 2019, San Diego. Proceedings... Livingston, NJ: Scherago$c2019
500 $aPlant and Animal Genome XXVII Conference (PAG).
520 $aRuzigrass (Urochloa ruziziensis) is a diploid, tropical forage grass native to Africa, widely planted in Brazil, known for its high nutritional quality. It is closely related to important forage species of Urochloa, and plays a crucial role in the breeding program of brachiaria grasses, mostly focused on inter-specific hybirds. Previous studies from our group based on shallow Illumina sequencing resulted in the development of the first molecular markers for the species (Silva et al., 2013), as well as in assessments of germplasm diversity and structure (Pessoa-Filho et al., 2015). Assembly and analysis of complete plastid genomes for four Urochloa species allowed the characterization of their phylogenetic divergence (Pessoa-Filho et al., 2017). Here, we present a near-complete phased diploid genome assembly of the heterozygous ruzigrass clone C69. We used PacBio Sequel to generate over 13.3 million long reads (mean size 6.5 kbp), adding up to 87.5 Gbp of raw data (~142x coverage). The current diploid assembly using FALCON-Unzip contains ~603 Mbp in 3,539 primary contigs, with NG50 of 286 kbp, and covers 98.2% of the estimated haploid genome size of 615 Mbp for ruzigrass. In addition, 82% of the assembly could be phased as separate haplotypes, with ~500 Mbp resolved as haplotigs. Assessment of assembly completeness showed 95.2% BUSCO matches as complete, and 83.3% as complete single-copy. Ongoing research includes transcriptome assembly to aid gene prediction and annotation, anchoring of contigs in linkage maps, and Hi-C scaffolding. A high-quality, chromosome-scale genome assembly for ruzigrass will aid research groups in the development and application of genomic tools in breeding and genetics of brachiaria grasses.
650 $aCapim Urochloa
650 $aGenoma
653 $aBrasil
700 1 $aSOUZA SOBRINHO, F. de
700 1 $aFRAGOSO, R. da R.
700 1 $aSILVA JUNIOR, O. B. da
700 1 $aFERREIRA, M. E.
Download
Esconder MarcMostrar Marc Completo |
|
Registro original: |
Embrapa Recursos Genéticos e Biotecnologia (CENARGEN) |
|
|
Biblioteca |
ID |
Origem |
Tipo/Formato |
Classificação |
Cutter |
Registro |
Volume |
Status |
Fechar
|
| Expressão de busca inválida. Verifique!!! |
|
|
