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Registro Completo |
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Biblioteca(s): |
Embrapa Meio Ambiente. |
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Data corrente: |
04/02/2019 |
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Data da última atualização: |
15/02/2019 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
KAVAMURA, V. N.; HAYAT, R.; CLARK, I. M.; ROSSMANN, M.; MENDES, R.; HIRSCH, P. R.; MAUCHLINE, T. H. |
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Afiliação: |
VANESSA NESSNER KAVAMURA, Rothamsted Research; RIFAT HAYAT, PMAS Arid Agriculture University; IAN MICHAEL CLARK, Rothamsted Research; MAIKE ROSSMANN, FAPESP; RODRIGO MENDES, CNPMA; PENNY R HIRSCH, Rothamsted Research; TIM H MAUCHLINE, Rothamsted Research. |
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Título: |
Inorganic nitrogen application affects both taxonomical and predicted functional structure of wheat rhizosphere bacterial communities. |
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Ano de publicação: |
2018 |
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Fonte/Imprenta: |
Frontiers in Microbiology, Lausanne, v. 9, 2018. Article 1074. |
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Páginas: |
15 p. |
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ISSN: |
1664-302X |
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DOI: |
https://doi.org/10.3389/fmicb.2018.01074 |
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Idioma: |
Inglês |
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Conteúdo: |
The effects of fertilizer regime on bulk soil microbial communities have been well studied, but this is not the case for the rhizosphere microbiome. The aim of this work was to assess the impact of fertilization regime on wheat rhizosphere microbiome assembly and 16S rRNA gene-predicted functions with soil from the long term Broadbalk experiment at Rothamsted Research. Soil from four N fertilization regimes (organic N, zero N, medium inorganic N and high inorganic N) was sown with seeds of Triticum aestivum cv. Cadenza. 16S rRNA gene amplicon sequencing was performed with the Illumina platform on bulk soil and rhizosphere samples of 4-week-old and flowering plants (10 weeks). Phylogenetic and 16S rRNA gene-predicted functional analyses were performed. Fertilization regime affected the structure and composition of wheat rhizosphere bacterial communities. Acidobacteria and Planctomycetes were significantly depleted in treatments receiving inorganic N, whereas the addition of high levels of inorganic N enriched members of the phylum Bacteroidetes, especially after 10 weeks. Bacterial richness and diversity decreased with inorganic nitrogen inputs and was highest after organic treatment (FYM). In general, high levels of inorganic nitrogen fertilizers negatively affect bacterial richness and diversity, leading to a less stable bacterial community structure over time, whereas, more stable bacterial communities are provided by organic amendments. 16S rRNA gene-predicted functional structure was more affected by growth stage than by fertilizer treatment, although, some functions related to energy metabolism and metabolism of terpenoids and polyketides were enriched in samples not receiving any inorganic N, whereas inorganic N addition enriched predicted functions related to metabolism of other amino acids and carbohydrates. Understanding the impact of different fertilizers on the structure and dynamics of the rhizosphere microbiome is an important step toward developing strategies for production of crops in a sustainable way. MenosThe effects of fertilizer regime on bulk soil microbial communities have been well studied, but this is not the case for the rhizosphere microbiome. The aim of this work was to assess the impact of fertilization regime on wheat rhizosphere microbiome assembly and 16S rRNA gene-predicted functions with soil from the long term Broadbalk experiment at Rothamsted Research. Soil from four N fertilization regimes (organic N, zero N, medium inorganic N and high inorganic N) was sown with seeds of Triticum aestivum cv. Cadenza. 16S rRNA gene amplicon sequencing was performed with the Illumina platform on bulk soil and rhizosphere samples of 4-week-old and flowering plants (10 weeks). Phylogenetic and 16S rRNA gene-predicted functional analyses were performed. Fertilization regime affected the structure and composition of wheat rhizosphere bacterial communities. Acidobacteria and Planctomycetes were significantly depleted in treatments receiving inorganic N, whereas the addition of high levels of inorganic N enriched members of the phylum Bacteroidetes, especially after 10 weeks. Bacterial richness and diversity decreased with inorganic nitrogen inputs and was highest after organic treatment (FYM). In general, high levels of inorganic nitrogen fertilizers negatively affect bacterial richness and diversity, leading to a less stable bacterial community structure over time, whereas, more stable bacterial communities are provided by organic amendments. 16S rRNA gene-predicted functional ... Mostrar Tudo |
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Palavras-Chave: |
Nitrogênio inorgânico. |
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Thesagro: |
Fertilizante nitrogenado; Impacto ambiental; Rizosfera; Trigo. |
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Thesaurus Nal: |
Bacterial communities; Environmental impact; Functional diversity; Microbiome; Nitrogen fertilizers; Rhizosphere; Sustainable agricultural intensification; Wheat. |
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Categoria do assunto: |
S Ciências Biológicas |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/191990/1/2018AP49.pdf
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Marc: |
LEADER 03228naa a2200385 a 4500
001 2105404
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008 2018 bl uuuu u00u1 u #d
022 $a1664-302X
024 7 $ahttps://doi.org/10.3389/fmicb.2018.01074$2DOI
100 1 $aKAVAMURA, V. N.
245 $aInorganic nitrogen application affects both taxonomical and predicted functional structure of wheat rhizosphere bacterial communities.$h[electronic resource]
260 $c2018
300 $a15 p.
520 $aThe effects of fertilizer regime on bulk soil microbial communities have been well studied, but this is not the case for the rhizosphere microbiome. The aim of this work was to assess the impact of fertilization regime on wheat rhizosphere microbiome assembly and 16S rRNA gene-predicted functions with soil from the long term Broadbalk experiment at Rothamsted Research. Soil from four N fertilization regimes (organic N, zero N, medium inorganic N and high inorganic N) was sown with seeds of Triticum aestivum cv. Cadenza. 16S rRNA gene amplicon sequencing was performed with the Illumina platform on bulk soil and rhizosphere samples of 4-week-old and flowering plants (10 weeks). Phylogenetic and 16S rRNA gene-predicted functional analyses were performed. Fertilization regime affected the structure and composition of wheat rhizosphere bacterial communities. Acidobacteria and Planctomycetes were significantly depleted in treatments receiving inorganic N, whereas the addition of high levels of inorganic N enriched members of the phylum Bacteroidetes, especially after 10 weeks. Bacterial richness and diversity decreased with inorganic nitrogen inputs and was highest after organic treatment (FYM). In general, high levels of inorganic nitrogen fertilizers negatively affect bacterial richness and diversity, leading to a less stable bacterial community structure over time, whereas, more stable bacterial communities are provided by organic amendments. 16S rRNA gene-predicted functional structure was more affected by growth stage than by fertilizer treatment, although, some functions related to energy metabolism and metabolism of terpenoids and polyketides were enriched in samples not receiving any inorganic N, whereas inorganic N addition enriched predicted functions related to metabolism of other amino acids and carbohydrates. Understanding the impact of different fertilizers on the structure and dynamics of the rhizosphere microbiome is an important step toward developing strategies for production of crops in a sustainable way.
650 $aBacterial communities
650 $aEnvironmental impact
650 $aFunctional diversity
650 $aMicrobiome
650 $aNitrogen fertilizers
650 $aRhizosphere
650 $aSustainable agricultural intensification
650 $aWheat
650 $aFertilizante nitrogenado
650 $aImpacto ambiental
650 $aRizosfera
650 $aTrigo
653 $aNitrogênio inorgânico
700 1 $aHAYAT, R.
700 1 $aCLARK, I. M.
700 1 $aROSSMANN, M.
700 1 $aMENDES, R.
700 1 $aHIRSCH, P. R.
700 1 $aMAUCHLINE, T. H.
773 $tFrontiers in Microbiology, Lausanne$gv. 9, 2018. Article 1074.
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Registro original: |
Embrapa Meio Ambiente (CNPMA) |
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Biblioteca |
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Tipo/Formato |
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| Registros recuperados : 43 | |
| 21. |  | SOUZA, D. T.; SILVA, F. P.; PANSA, C. C.; KAVAMURA, V. N.; TAKETANI, R. G.; MELO, I. S. de. Diversidade e composição microbiana em esponjas marinhas do Arquipélago de São Pedro e São Paulo. Hechos Microbiológicos, v. 5, n. 2, p. 100, 2014. Suplemento. Edição das Memorias do 22º Congreso Latinoamericano de Microbiologia e 4º Congreso Colombiano de Microbiologia, Cartagena, 2014. Ref. TLP-183.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 24. | | BETIM, B. H.; SOUZA, W. R.; SANTOS, S. N.; PARMA, M. M.; KAVAMURA, V. N.; MELO, I. S. de. Potencial de Pseudomonas sp. psicrotolerantes isoladas da Antártica no biocontrole de Botrytis cinerea. In: CONGRESSO INTERINSTITUCIONAL DE INICIAÇÃO CIENTÍFICA, 5., 2011, Campinas. Anais... Campinas: Embrapa Monitoramento por Satélite, 2011. 1 CD ROM. Nº 11401.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 25. | | SANTOS, S. N.; KAVAMURA, V. N.; TAKETANI, R. G.; VASCONCELLOS, R. L. F.; ZUCCHI, T. D.; MELO, I. S. de. Draft genome sequence of Bacillus sp. strain CMAA 1185, a cellullolytic bacterium isolated from Stain House Lake, Antarctic Peninsula. Genome Announcements, Washington DC, v. 3, n. 3, p. e00436-15, 2015.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 26. | | KAVAMURA, V. N.; HAYAT, R.; CLARK, I. M.; ROSSMANN, M.; MENDES, R.; HIRSCH, P. R.; MAUCHLINE, T. H. Inorganic nitrogen application affects both taxonomical and predicted functional structure of wheat rhizosphere bacterial communities. Frontiers in Microbiology, Lausanne, v. 9, 2018. Article 1074. 15 p.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 27. | | SÁBER, M. L.; ANDREOTE, F. D.; KAVAMURA, V. N.; FRIGHETTO, R. T. S.; TAKETANI, R. G.; MELO, I. S. de. Effect of ultraviolet-B (UV-B) radiation on bacterial community in the soybean phyllosphere. African Journal of Microbiology Research, Sapele, v. 8, n. 31, p. 2916-2923, 2014.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 1 |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 28. | | MELO, I. S. de; VALENTE, A. M. M. P.; KAVAMURA, V. N.; VILELA, E. S. D.; FAULL, J. L. Mycoparasitic nature of Bionectria sp. strain 6.21. Journal of Plant Protection Research, Varsóvia, v. 54, n. 4, p. 327-333, 2014.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 2 |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 29. | | KAVAMURA, V. N.; TAKETANI, R. G.; LANÇONI, M. D.; ANDREOTE, F. D.; MENDES, R.; MELO, I. S. de. Water regime influences bulk soil and rhizosphere of Cereus jamacaru bacterial communities in the Brazilian caatinga biome. Plos One, San Francisco, v. 8, n. 9, e73606, 2013.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 31. | | SOUZA, D. T.; GENUÁRIO, D. B.; SILVA, F. S. P.; PANSA, C. C.; KAVAMURA, V. N.; MORAES, F. C.; TAKETANI, R. G.; MELO, I. S. de. Analysis of bacterial composition in marine sponges reveals the influence of host phylogeny and environment. FEMS Microbiology Ecology, v. 93, n. 1, fiw204, 2016.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 32. | | PANSA, C. C.; SANTOS, S. N.; SOUZA, D. T.; SOUZA, F.; ALMEIDA, R. C.; KAVAMURA, V. N.; MELO, I. S. de. Avaliacão e caracterizacão de exopolissacarideos por bactérias isoladas de esponjas marinhas do arquipélago São Pedro e São Paulo. Hechos Microbiológicos, v. 5, n. 2, p. 58, 2014. Suplemento. Edição das Memorias do 22º Congreso Latinoamericano de Microbiologia e 4º Congreso Colombiano de Microbiologia, Cartagena, 2014. Ref. TLP-23.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 34. | | ALMEIDA, R. de C. de; SILVA, F. S. P. da; SOUZA, D. T.; PANSA, C. C.; CASTELIANI, A. G. B.; KAVAMURA, V. N.; MELO, I. S. de. Controle da brusone (Magnaporthe grisea) em trigo por fungicida produzido por actinobacteria isolada de esponja marinha. Hechos Microbiológicos, v. 5, n. 2, p. 60, 2014. Suplemento. Edição das Memorias do 22º Congreso Latinoamericano de Microbiologia e 4º Congreso Colombiano de Microbiologia, Cartagena, 2014. Ref. TLP-30.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 35. | | CASTELIANI, A. G. B.; KAVAMURA, V. N.; ZUCCHI, T. D.; SÁBER, M. L.; NASCIMENTO, R. dos S.; FRIGHETTO, R. T. S.; TAKETANI, R. G.; MELO, I. S. de. UV-B resistant yeast inhabit the phyllosphere of strawberry. British Microbiology Research Journal, London, v. 4, n. 10, p. 1105-1117, 2014.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: C - 0 |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 36. | | MELO, I. S. de; VASCONCELLOS, R. L. F.; NASCIMENTO, R. dos S.; VILELA, E. S. D.; KAVAMURA, V. N.; ROSA, L. H. Endophytic bacteria from Deschampsia antarctica and assessment of their potential to promote plant growth. In: INTERNATIONAL SYMPOSIUM ON MICROBIAL ECOLOGY, 15., 2014, Seoul. Proceedings... Wageningen: The International Society for Microbial Ecology (ISME), 2014. p. 139-140.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 37. | | KAVAMURA, V. N.; ROBINSON, R. J.; HAYAT, R.; CLARK, I. M.; HUGHES, D.; ROSSMANN, M.; HIRSCH, P. R.; MENDES, R.; MAUCHLINE, T. H. Land management and microbial seed load effect on rhizosphere and endosphere bacterial community assembly in wheat. Frontiers in Microbiology, Lausanne, v. 10, 2019. Article 2625.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 38. | | KAVAMURA, V. N.; CLARK, I.; HIRSCH, P. R.; CAULFIELD, J.; SARRIA, A. F.; ROSSMANN, M.; BIRKETT, M.; MELO, I. S. de; MENDES, R.; MAUCHLINE, T. Wheat breeding influences root traits and selection of bacterial communities in the rhizosphere. In: PLANT MICROBIOME SYMPOSIUM, 2., 2018, Amsterdam. [Abstracts...] Amsterdam: Netherlands Institute of Ecology (NIOO-KNAW), 2018.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 39. | | KAVAMURA, V. N.; CLARK, I.; HIRSCH, P. R.; SARRIA, A. F.; MELO, I. S. de; ROSSMANN, M.; MENDES, R.; BIRKETT, M.; MAUCHLINE, T. Wheat breeding and its impact on root exudates and rhizosphere bacterial communities. In: INTERNATIONAL SYMPOSIUM ON MICROBIAL ECOLOGY, 16., 2016, Montreal. Proceedings... Wageningen: The International Society for Microbial Ecology (ISME), 2016. p. 1063.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| 40. | | KAVAMURA, V. N.; ROBINSON, R. J.; HUGHES, D.; CLARK, I. M.; ROSSMANN, M.; MELO, I. S. de; HIRSCH, P. R.; MENDES, R.; MAUCHLINE, T. H. Wheat dwarfing influences selection of the rhizosphere microbiome. Scientific Reports, v. 10, Article 1452, 2020.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Meio Ambiente. |
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| Registros recuperados : 43 | |
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| Nenhum registro encontrado para a expressão de busca informada. |
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