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Registro Completo |
Biblioteca(s): |
Embrapa Agrobiologia. |
Data corrente: |
19/07/2019 |
Data da última atualização: |
19/11/2019 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Autoria: |
LAJUDIE, P. M. de; ANDREWS, M.; ARDLEY, J.; EARDLY, B.; JUMAS-BILAK, E.; KUZMANOVIC, N.; LASSALE, F.; LINDSTRÖM, K.; MHAMDI, R.; MARTINEZ-ROMERO, E.; MOULIN, L.; MOUSAVI, S. A.; NESME, X.; PEIX, A.; PULAWSKA, J.; STEENKAMP, E.; STEPKOWSKI, T.; TIAN, C-F; VINUESA, P.; WEI, G.; WILLEMS, A.; ZILLI, J. E.; YOUNG, P. |
Afiliação: |
Philippe M. de Lajudie, 1IRD, University of Montpellier, CIRAD, INRA, SupAgro, LSTM, Montpellier; Mitchell Andrews, Lincoln University, NZ; Julie Ardley, Murdoch University, AU; Bertrand Eardly, 4Penn State Berks College, PA, USA; Estelle Jumas-Bilak, University of Montpellier, FR; Nemanja Kuzmanovic, Federal Research Centre for Cultivated Plants, GE; Florent Lassalle, St Mary s Hospital, UK; Kristina Lindström, University of Helsinki, FI; Ridha Mhamdi, Centre of Biotechnology of Borj-Cedria, Tunisia; Esperanza Martínez-Romero, Universidad Nacional Autónoma de Mexico; Lionel Moulin, IRD, CIRAD, University of Montpellier, FR; Seyed Abdollah Mousavi, University of Helsinki, FI; Xavier Nesme, INRA, Univ Lyon, Villeurbanne, FR; Alvaro Peix, 13Instituto de Recursos Naturales y Agrobiología, Salamanca.; Joanna Pu?awska, Research Institute of Horticulture, Poland; Emma Steenkamp, University of Pretoria, South Africa; Tomasz St?pkowski, Warsaw University, Poland; Chang-Fu Tian, China Agricultural University; Pablo Vinuesa, Universidad Nacional Autónoma de Mexico; Gehong Wei, Northwest A&F University, China; Anne Willems, Ghent University, Belgium; JERRI EDSON ZILLI, CNPAB; Peter Young, University of York, UK. |
Título: |
Minimal standards for the description of new genera and species of rhizobia and agrobacteria. |
Ano de publicação: |
2019 |
Fonte/Imprenta: |
International Journal of Systematic and Evolutionary Microbiology, v 69, p. 1852-1863, 2019. |
DOI: |
10.1099/ijsem.0.003426 |
Idioma: |
Inglês |
Conteúdo: |
Herein the members of the Subcommittee on Taxonomy of Rhizobia and Agrobacteria of the International Committee on Systematics of Prokaryotes review recent developments in rhizobial and agrobacterial taxonomy and propose updated minimal standards for the description of new species (and genera) in these groups. The essential requirements (minimal standards) for description of a new species are (1) a genome sequence of at least the proposed type strain and (2) evidence for differentiation from other species based on genome sequence comparisons. It is also recommended that (3) genetic variation within the species is documented with sequence data from several clearly different strains and (4) phenotypic features are described, and their variation documented with data from a relevant set of representative strains. Furthermore, it is encouraged that information is provided on (5) nodulation or pathogenicity phenotypes, as appropriate, with relevant gene sequences. These guidelines supplement the current rules of general bacterial taxonomy, which require (6) a name that conforms to the International Code of Nomenclature of Prokaryotes, (7) validation of the name by publication either directly in the International Journal of Systematic and Evolutionary Microbiology or in a validation list when published elsewhere, and (8) deposition of the type strain in two international culture collections in separate countries. |
Palavras-Chave: |
Agrobacteria; Genome based taxonomy; Minimal standards for taxonomy; Rhizobia. |
Categoria do assunto: |
S Ciências Biológicas |
Marc: |
LEADER 02674naa a2200445 a 4500 001 2110744 005 2019-11-19 008 2019 bl uuuu u00u1 u #d 024 7 $a10.1099/ijsem.0.003426$2DOI 100 1 $aLAJUDIE, P. M. de 245 $aMinimal standards for the description of new genera and species of rhizobia and agrobacteria.$h[electronic resource] 260 $c2019 520 $aHerein the members of the Subcommittee on Taxonomy of Rhizobia and Agrobacteria of the International Committee on Systematics of Prokaryotes review recent developments in rhizobial and agrobacterial taxonomy and propose updated minimal standards for the description of new species (and genera) in these groups. The essential requirements (minimal standards) for description of a new species are (1) a genome sequence of at least the proposed type strain and (2) evidence for differentiation from other species based on genome sequence comparisons. It is also recommended that (3) genetic variation within the species is documented with sequence data from several clearly different strains and (4) phenotypic features are described, and their variation documented with data from a relevant set of representative strains. Furthermore, it is encouraged that information is provided on (5) nodulation or pathogenicity phenotypes, as appropriate, with relevant gene sequences. These guidelines supplement the current rules of general bacterial taxonomy, which require (6) a name that conforms to the International Code of Nomenclature of Prokaryotes, (7) validation of the name by publication either directly in the International Journal of Systematic and Evolutionary Microbiology or in a validation list when published elsewhere, and (8) deposition of the type strain in two international culture collections in separate countries. 653 $aAgrobacteria 653 $aGenome based taxonomy 653 $aMinimal standards for taxonomy 653 $aRhizobia 700 1 $aANDREWS, M. 700 1 $aARDLEY, J. 700 1 $aEARDLY, B. 700 1 $aJUMAS-BILAK, E. 700 1 $aKUZMANOVIC, N. 700 1 $aLASSALE, F. 700 1 $aLINDSTRÖM, K. 700 1 $aMHAMDI, R. 700 1 $aMARTINEZ-ROMERO, E. 700 1 $aMOULIN, L. 700 1 $aMOUSAVI, S. A. 700 1 $aNESME, X. 700 1 $aPEIX, A. 700 1 $aPULAWSKA, J. 700 1 $aSTEENKAMP, E. 700 1 $aSTEPKOWSKI, T. 700 1 $aTIAN, C-F 700 1 $aVINUESA, P. 700 1 $aWEI, G. 700 1 $aWILLEMS, A. 700 1 $aZILLI, J. E. 700 1 $aYOUNG, P. 773 $tInternational Journal of Systematic and Evolutionary Microbiology, v 69, p. 1852-1863, 2019.
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| Acesso ao texto completo restrito à biblioteca da Embrapa Florestas. Para informações adicionais entre em contato com cnpf.biblioteca@embrapa.br. |
Registro Completo
Biblioteca(s): |
Embrapa Florestas. |
Data corrente: |
25/09/2008 |
Data da última atualização: |
25/09/2008 |
Autoria: |
PEY, B.; OUVRARD, S.; CORTET, J.; SCHWARTZ, C.; WATTEAU, F. |
Título: |
Diversity and functional play of soil fauna in a waste-constructed soil in industrial environement : contribution of the modelization of the evolution of a Technosol. |
Ano de publicação: |
2008 |
Fonte/Imprenta: |
In: INTERNATIONAL COLLOQUIUM ON SOIL ZOOLOGY, 15; INTERNATIONAL COLLOQUIUM ON APTERYGOTA, 12., 2008, Curitiba. Biodiversity, conservation and sustainabele management of soil animal: abstracts. Colombo: Embrapa Florestas. Editors: George Gardner Brown; Klaus Dieter Sautter; Renato Marques; Amarildo Pasini. 1 CD-ROM. |
Idioma: |
Inglês |
Conteúdo: |
In the current technological context, anthropization of the natural environment modifies roughly
and radically the nature and the organization of the constituent materials of soils. These materials
interact with the parent rock and are submitted to a pedogenetic evolution under influences of
climate, biological activity and topographical conditions according to the three fundamental
processes: weathering, transportation and accumulation. It leads to pedological profiles which
are notably different of those observed on natural parent rock and have functional properties
(e.g. food, filter, storage), which do not fit to agronomical demands. Fauna takes part in several
processes in soils : bioturbation (energy and matter cycles, (Lavelle et al. 1997)), aggregation
(Bossuyt et al. 2005), organic matter decomposition (C and N cycles, (Lavelle and Spain 2001))
which can modify indirectly others processes as eluviation, leaching, chemical weathering. The
results can lead to modifications of mineral nutrition and growth of plants (Huhta 2007).
Nevertheless, the part of the faunal diversity on the soil processes is still unknown, even though
some studies demonstrated that modifications of diversity could influence the growth of plants
(Huhta 2007).
The scientific questions of this project focus on the capacity of fauna (particularly functional
diversity, (Cortet et al. 2003; Heemsbergen et al. 2004)) to contribute to the rehabilitation of
these soils. We focus on the mechanism and the evolution of Technosol, which can be natural
soils, modified by human activities or constructed soils with waste (e.g.).
In our study, we focus on a constructed soil made of clean-up industrial soil, paper sludges and
compost. Fauna will be introduced on three experimental systems representing three different
scales: one hectare plots, field lysimeters and laboratory experiences (mesocosms).
This poster will present the concept of experiments and the first results obtained.
This work is supported by the ADEME (French Environmental Agency), the Lorraine region and
the GISFI (www.gisfi.prd.fr). MenosIn the current technological context, anthropization of the natural environment modifies roughly
and radically the nature and the organization of the constituent materials of soils. These materials
interact with the parent rock and are submitted to a pedogenetic evolution under influences of
climate, biological activity and topographical conditions according to the three fundamental
processes: weathering, transportation and accumulation. It leads to pedological profiles which
are notably different of those observed on natural parent rock and have functional properties
(e.g. food, filter, storage), which do not fit to agronomical demands. Fauna takes part in several
processes in soils : bioturbation (energy and matter cycles, (Lavelle et al. 1997)), aggregation
(Bossuyt et al. 2005), organic matter decomposition (C and N cycles, (Lavelle and Spain 2001))
which can modify indirectly others processes as eluviation, leaching, chemical weathering. The
results can lead to modifications of mineral nutrition and growth of plants (Huhta 2007).
Nevertheless, the part of the faunal diversity on the soil processes is still unknown, even though
some studies demonstrated that modifications of diversity could influence the growth of plants
(Huhta 2007).
The scientific questions of this project focus on the capacity of fauna (particularly functional
diversity, (Cortet et al. 2003; Heemsbergen et al. 2004)) to contribute to the rehabilitation of
these soils. We focus on the mechanism and the... Mostrar Tudo |
Categoria do assunto: |
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Marc: |
LEADER 02910naa a2200169 a 4500 001 1314933 005 2008-09-25 008 2008 bl uuuu u00u1 u #d 100 1 $aPEY, B. 245 $aDiversity and functional play of soil fauna in a waste-constructed soil in industrial environement$bcontribution of the modelization of the evolution of a Technosol. 260 $c2008 520 $aIn the current technological context, anthropization of the natural environment modifies roughly and radically the nature and the organization of the constituent materials of soils. These materials interact with the parent rock and are submitted to a pedogenetic evolution under influences of climate, biological activity and topographical conditions according to the three fundamental processes: weathering, transportation and accumulation. It leads to pedological profiles which are notably different of those observed on natural parent rock and have functional properties (e.g. food, filter, storage), which do not fit to agronomical demands. Fauna takes part in several processes in soils : bioturbation (energy and matter cycles, (Lavelle et al. 1997)), aggregation (Bossuyt et al. 2005), organic matter decomposition (C and N cycles, (Lavelle and Spain 2001)) which can modify indirectly others processes as eluviation, leaching, chemical weathering. The results can lead to modifications of mineral nutrition and growth of plants (Huhta 2007). Nevertheless, the part of the faunal diversity on the soil processes is still unknown, even though some studies demonstrated that modifications of diversity could influence the growth of plants (Huhta 2007). The scientific questions of this project focus on the capacity of fauna (particularly functional diversity, (Cortet et al. 2003; Heemsbergen et al. 2004)) to contribute to the rehabilitation of these soils. We focus on the mechanism and the evolution of Technosol, which can be natural soils, modified by human activities or constructed soils with waste (e.g.). In our study, we focus on a constructed soil made of clean-up industrial soil, paper sludges and compost. Fauna will be introduced on three experimental systems representing three different scales: one hectare plots, field lysimeters and laboratory experiences (mesocosms). This poster will present the concept of experiments and the first results obtained. This work is supported by the ADEME (French Environmental Agency), the Lorraine region and the GISFI (www.gisfi.prd.fr). 700 1 $aOUVRARD, S. 700 1 $aCORTET, J. 700 1 $aSCHWARTZ, C. 700 1 $aWATTEAU, F. 773 $tIn: INTERNATIONAL COLLOQUIUM ON SOIL ZOOLOGY, 15; INTERNATIONAL COLLOQUIUM ON APTERYGOTA, 12., 2008, Curitiba. Biodiversity, conservation and sustainabele management of soil animal: abstracts. Colombo: Embrapa Florestas. Editors: George Gardner Brown; Klaus Dieter Sautter; Renato Marques; Amarildo Pasini. 1 CD-ROM.
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