| |
|
|
|
Registro Completo |
|
Biblioteca(s): |
Embrapa Meio Ambiente. |
|
Data corrente: |
28/11/2019 |
|
Data da última atualização: |
28/11/2019 |
|
Tipo da produção científica: |
Artigo em Periódico Indexado |
|
Autoria: |
KAVAMURA, V. N.; ROBINSON, R. J.; HAYAT, R.; CLARK, I. M.; HUGHES, D.; ROSSMANN, M.; HIRSCH, P. R.; MENDES, R.; MAUCHLINE, T. H. |
|
Afiliação: |
VANESSA NESSNER KAVAMURA, Rothamsted Research; REBEKAH J ROBINSON, Plant Pathology Laboratory, RHS; RIFAT HAYAT, Pir Mehr Ali Shah Arid Agriculture University; IAN MICHAEL CLARK, Rothamsted Research; DAVID HUGHES, Rothamsted Research; MAIKE ROSSMANN; PENNY R HIRSCH, Rothamsted Research; RODRIGO MENDES, CNPMA; TIM H MAUCHLINE, Rothamsted Research. |
|
Título: |
Land management and microbial seed load effect on rhizosphere and endosphere bacterial community assembly in wheat. |
|
Ano de publicação: |
2019 |
|
Fonte/Imprenta: |
Frontiers in Microbiology, Lausanne, v. 10, 2019. Article 2625. |
|
ISSN: |
1664-302X |
|
DOI: |
https://doi.org/10.3389/fmicb.2019.02625 |
|
Idioma: |
Inglês |
|
Conteúdo: |
Abstract: Microbial community ecology studies have traditionally utilized culture-based methodologies, though the advent of next-generation amplicon sequencing has facilitated superior resolution analyses of complex microbial communities. Here, we used culture-dependent and -independent approaches to explore the influence of land use as well as microbial seed load on bacterial community structure of the wheat rhizosphere and root endosphere. It was found that niche was an important factor in shaping the microbiome when using both methodological approaches, and that land use was also a discriminatory factor for the culture-independent-based method. Although culture-independent methods provide a higher resolution of analysis, it was found that in the rhizosphere, particular operational taxonomic units (OTUs) in the culture-dependent fraction were absent from the culture-independent fraction, indicating that deeper sequence analysis is required for this approach to be exhaustive. We also found that the microbial seed load defined the endosphere, but not rhizosphere, community structure for plants grown in soil which was not wheat adapted. Together, these findings increase our understanding of the importance of land management and microbial seed load in shaping the root microbiome of wheat and this knowledge will facilitate the exploitation of plant?microbe interactions for the development of novel microbial inoculants. |
|
Palavras-Chave: |
Endosphere. |
|
Thesagro: |
Manejo do Solo; População Microbiana; Rizosfera; Semente; Trigo. |
|
Thesaurus Nal: |
Microbiome; Rhizosphere; Seeds; Wheat. |
|
Categoria do assunto: |
S Ciências Biológicas |
|
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/205745/1/Mendes-Land-Management-2019.pdf
|
|
Marc: |
LEADER 02455naa a2200361 a 4500
001 2115412
005 2019-11-28
008 2019 bl uuuu u00u1 u #d
022 $a1664-302X
024 7 $ahttps://doi.org/10.3389/fmicb.2019.02625$2DOI
100 1 $aKAVAMURA, V. N.
245 $aLand management and microbial seed load effect on rhizosphere and endosphere bacterial community assembly in wheat.$h[electronic resource]
260 $c2019
520 $aAbstract: Microbial community ecology studies have traditionally utilized culture-based methodologies, though the advent of next-generation amplicon sequencing has facilitated superior resolution analyses of complex microbial communities. Here, we used culture-dependent and -independent approaches to explore the influence of land use as well as microbial seed load on bacterial community structure of the wheat rhizosphere and root endosphere. It was found that niche was an important factor in shaping the microbiome when using both methodological approaches, and that land use was also a discriminatory factor for the culture-independent-based method. Although culture-independent methods provide a higher resolution of analysis, it was found that in the rhizosphere, particular operational taxonomic units (OTUs) in the culture-dependent fraction were absent from the culture-independent fraction, indicating that deeper sequence analysis is required for this approach to be exhaustive. We also found that the microbial seed load defined the endosphere, but not rhizosphere, community structure for plants grown in soil which was not wheat adapted. Together, these findings increase our understanding of the importance of land management and microbial seed load in shaping the root microbiome of wheat and this knowledge will facilitate the exploitation of plant?microbe interactions for the development of novel microbial inoculants.
650 $aMicrobiome
650 $aRhizosphere
650 $aSeeds
650 $aWheat
650 $aManejo do Solo
650 $aPopulação Microbiana
650 $aRizosfera
650 $aSemente
650 $aTrigo
653 $aEndosphere
700 1 $aROBINSON, R. J.
700 1 $aHAYAT, R.
700 1 $aCLARK, I. M.
700 1 $aHUGHES, D.
700 1 $aROSSMANN, M.
700 1 $aHIRSCH, P. R.
700 1 $aMENDES, R.
700 1 $aMAUCHLINE, T. H.
773 $tFrontiers in Microbiology, Lausanne$gv. 10, 2019. Article 2625.
Download
Esconder MarcMostrar Marc Completo |
|
Registro original: |
Embrapa Meio Ambiente (CNPMA) |
|
|
Biblioteca |
ID |
Origem |
Tipo/Formato |
Classificação |
Cutter |
Registro |
Volume |
Status |
URL |
Voltar
|
|
|
| Registros recuperados : 7 | |
| 1. |  | KAVAMURA, V.; HIRSCH, P. R.; CLARK, I.; ROSSMANN, M.; MENDES, R.; MAUCHLINE, T. Impact of long-term fertilisation regimes on wheat rhizosphere bacterial communities and 16S rRNA gene-predicted functions related to nitrogen and phosphorus metabolism in soils. In: SYMPOSIUM ON BACTERIAL GENETICS AND ECOLOGY, 14., 2017, Aberdeen. Annals... Aberdeen: BAGECO, 2017. p. 121.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio Ambiente. |
|   |
| 2. | | KAVAMURA, V. N.; HAYAT, R.; CLARK, I. M.; ROSSMANN, M.; MENDES, R.; HIRSCH, P. R.; MAUCHLINE, T. H. Inorganic nitrogen application affects both taxonomical and predicted functional structure of wheat rhizosphere bacterial communities. Frontiers in Microbiology, Lausanne, v. 9, 2018. Article 1074. 15 p.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Meio Ambiente. |
|  |
| 3. | | KAVAMURA, V. N.; ROBINSON, R. J.; HAYAT, R.; CLARK, I. M.; HUGHES, D.; ROSSMANN, M.; HIRSCH, P. R.; MENDES, R.; MAUCHLINE, T. H. Land management and microbial seed load effect on rhizosphere and endosphere bacterial community assembly in wheat. Frontiers in Microbiology, Lausanne, v. 10, 2019. Article 2625.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Meio Ambiente. |
| |
| 4. | | KAVAMURA, V. N.; CLARK, I.; HIRSCH, P. R.; CAULFIELD, J.; SARRIA, A. F.; ROSSMANN, M.; BIRKETT, M.; MELO, I. S. de; MENDES, R.; MAUCHLINE, T. Wheat breeding influences root traits and selection of bacterial communities in the rhizosphere. In: PLANT MICROBIOME SYMPOSIUM, 2., 2018, Amsterdam. [Abstracts...] Amsterdam: Netherlands Institute of Ecology (NIOO-KNAW), 2018.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio Ambiente. |
| |
| 5. | | KAVAMURA, V. N.; CLARK, I.; HIRSCH, P. R.; SARRIA, A. F.; MELO, I. S. de; ROSSMANN, M.; MENDES, R.; BIRKETT, M.; MAUCHLINE, T. Wheat breeding and its impact on root exudates and rhizosphere bacterial communities. In: INTERNATIONAL SYMPOSIUM ON MICROBIAL ECOLOGY, 16., 2016, Montreal. Proceedings... Wageningen: The International Society for Microbial Ecology (ISME), 2016. p. 1063.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio Ambiente. |
| |
| 6. | | KAVAMURA, V. N.; ROBINSON, R. J.; HUGHES, D.; CLARK, I. M.; ROSSMANN, M.; MELO, I. S. de; HIRSCH, P. R.; MENDES, R.; MAUCHLINE, T. H. Wheat dwarfing influences selection of the rhizosphere microbiome. Scientific Reports, v. 10, Article 1452, 2020.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Meio Ambiente. |
| |
| 7. | | PYLRO, V. S.; ROESCH, L. F. W.; ORTEGA, J. M.; AMARAL, A. M. do; TÓTOLA, M. R.; HIRSCH, P. R.; ROSADO, A. S.; GÓES-NETO, A.; SILVA, A. L. da C.; ROSA, C. A.; MORAIS, D. K.; ANDREOTE, F. D.; DUARTE, G. F.; MELO, I. S. de; SELDIN, L.; LAMBAIS, M. R.; HUNGRIA, M.; PEIXOTO, R. S.; KRUGER, R. H.; TSAI, S. M.; AZEVEDO, V. Brazilian microbiome project: revealing the unexplored microbial diversity - challenges and prospects. Microbial Ecology, New York, v. 67, n. 2, p. 237-241, Oct. 2014.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Meio Ambiente; Embrapa Soja. |
| |
| Registros recuperados : 7 | |
|
| Nenhum registro encontrado para a expressão de busca informada. |
|
|
