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Registro Completo |
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Biblioteca(s): |
Embrapa Agricultura Digital; Embrapa Pecuária Sudeste; Embrapa Pecuária Sul; Embrapa Suínos e Aves. |
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Data corrente: |
03/01/2020 |
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Data da última atualização: |
03/01/2020 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
MORÉ, D. D.; CARDOSO, F. F.; MUDADU, M. de A.; MALAGO JUNIOR, W.; GULIAS GOMES, C. C.; SOLLERO, B. P.; IBELLI, A. M. G.; COUTINHO, L. L.; REGITANO, L. C. de A. |
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Afiliação: |
Daniela D. Moré, CPPSE; FERNANDO FLORES CARDOSO, CPPSUL; MAURICIO DE ALVARENGA MUDADU, CNPTIA; WILSON MALAGO JUNIOR, CPPSE; CLAUDIA CRISTINA GULIAS GOMES, CPPSUL; BRUNA PENA SOLLERO, CPPSUL; ADRIANA MERCIA GUARATINI IBELLI, CNPSA; Luiz L. Coutinho, USP; LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE. |
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Título: |
Network analysis uncovers putative genes affecting resistance to tick infestation in Braford cattle skin. |
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Ano de publicação: |
2019 |
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Fonte/Imprenta: |
BMC Genomics, v. 20, n. 998, 2019. |
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DOI: |
10.1186/s12864-019-6360-3 |
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Idioma: |
Inglês |
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Conteúdo: |
Background: Genetic resistance in cattle is considered a suitable way to control tick burden and its consequent losses for livestock production. Exploring tick-resistant (R) and tick-susceptible (S) hosts, we investigated the genetic mechanisms underlying the variation of Braford resistance to tick infestation. Skin biopsies from four-times-artificially infested R (n = 20) and S (n = 19) hosts, obtained before the first and 24 h after the fourth tick infestation were submitted to RNA-Sequencing. Differential gene expression, functional enrichment, and network analysis were performed to identify genetic pathways and transcription factors (TFs) affecting host resistance. Results: Intergroup comparisons of hosts before (Rpre vs. Spre) and after (Rpost vs. Spost) tick infestation found 51 differentially expressed genes (DEGs), of which almost all presented high variation (TopDEGs), and 38 were redundant genes. Gene expression was consistently different between R and S hosts, suggesting the existence of specific anti-tick mechanisms. In the intragroup comparisons, Rpost vs. Rpre and Spost vs. Spre, we found more than two thousand DEGs in response to tick infestation in both resistance groups. Redundant and non-redundant TopDEGs with potential anti-tick functions suggested a role in the development of different levels of resistance within the same breed. Leukocyte chemotaxis was over-represented in both hosts, whereas skin degradation and remodeling were only found in TopDEGs from R hosts. Also, these genes indicated the participation of cytokines, such as IL6 and IL22, and the activation of Wingless (WNT)-signaling pathway. A central gene of this pathway, WNT7A, was consistently modulated when hosts were compared. Moreover, the findings based on a genome-wide association study (GWAS) corroborate the prediction of the WNT-signaling pathway as a candidate mechanism of resistance. The regulation of immune response was the most relevant pathway predicted for S hosts. Members of Ap1 and NF-kB families were the most relevant TFs predicted for R and S, respectively. Conclusion: This work provides indications of genetic mechanisms presented by Braford cattle with different levels of resistance in response to tick infestation, contributing to the search of candidate genes for tick resistance in bovine. MenosBackground: Genetic resistance in cattle is considered a suitable way to control tick burden and its consequent losses for livestock production. Exploring tick-resistant (R) and tick-susceptible (S) hosts, we investigated the genetic mechanisms underlying the variation of Braford resistance to tick infestation. Skin biopsies from four-times-artificially infested R (n = 20) and S (n = 19) hosts, obtained before the first and 24 h after the fourth tick infestation were submitted to RNA-Sequencing. Differential gene expression, functional enrichment, and network analysis were performed to identify genetic pathways and transcription factors (TFs) affecting host resistance. Results: Intergroup comparisons of hosts before (Rpre vs. Spre) and after (Rpost vs. Spost) tick infestation found 51 differentially expressed genes (DEGs), of which almost all presented high variation (TopDEGs), and 38 were redundant genes. Gene expression was consistently different between R and S hosts, suggesting the existence of specific anti-tick mechanisms. In the intragroup comparisons, Rpost vs. Rpre and Spost vs. Spre, we found more than two thousand DEGs in response to tick infestation in both resistance groups. Redundant and non-redundant TopDEGs with potential anti-tick functions suggested a role in the development of different levels of resistance within the same breed. Leukocyte chemotaxis was over-represented in both hosts, whereas skin degradation and remodeling were only found in TopDEGs from... Mostrar Tudo |
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Palavras-Chave: |
Bovine; Braford; Enrichment analysis; Expressão gênica; Gado Braford; Network analysis; RNA-Seq. |
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Thesagro: |
Bovino; Carrapato; Resistência; Resistência Genética. |
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Thesaurus Nal: |
Cattle; Gene expression; Rhipicephalus microplus; Tick infestations. |
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Categoria do assunto: |
--
L Ciência Animal e Produtos de Origem Animal |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/208137/1/More-et-al-2019.pdf
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Marc: |
LEADER 03479naa a2200409 a 4500
001 2118135
005 2020-01-03
008 2019 bl uuuu u00u1 u #d
024 7 $a10.1186/s12864-019-6360-3$2DOI
100 1 $aMORÉ, D. D.
245 $aNetwork analysis uncovers putative genes affecting resistance to tick infestation in Braford cattle skin.$h[electronic resource]
260 $c2019
520 $aBackground: Genetic resistance in cattle is considered a suitable way to control tick burden and its consequent losses for livestock production. Exploring tick-resistant (R) and tick-susceptible (S) hosts, we investigated the genetic mechanisms underlying the variation of Braford resistance to tick infestation. Skin biopsies from four-times-artificially infested R (n = 20) and S (n = 19) hosts, obtained before the first and 24 h after the fourth tick infestation were submitted to RNA-Sequencing. Differential gene expression, functional enrichment, and network analysis were performed to identify genetic pathways and transcription factors (TFs) affecting host resistance. Results: Intergroup comparisons of hosts before (Rpre vs. Spre) and after (Rpost vs. Spost) tick infestation found 51 differentially expressed genes (DEGs), of which almost all presented high variation (TopDEGs), and 38 were redundant genes. Gene expression was consistently different between R and S hosts, suggesting the existence of specific anti-tick mechanisms. In the intragroup comparisons, Rpost vs. Rpre and Spost vs. Spre, we found more than two thousand DEGs in response to tick infestation in both resistance groups. Redundant and non-redundant TopDEGs with potential anti-tick functions suggested a role in the development of different levels of resistance within the same breed. Leukocyte chemotaxis was over-represented in both hosts, whereas skin degradation and remodeling were only found in TopDEGs from R hosts. Also, these genes indicated the participation of cytokines, such as IL6 and IL22, and the activation of Wingless (WNT)-signaling pathway. A central gene of this pathway, WNT7A, was consistently modulated when hosts were compared. Moreover, the findings based on a genome-wide association study (GWAS) corroborate the prediction of the WNT-signaling pathway as a candidate mechanism of resistance. The regulation of immune response was the most relevant pathway predicted for S hosts. Members of Ap1 and NF-kB families were the most relevant TFs predicted for R and S, respectively. Conclusion: This work provides indications of genetic mechanisms presented by Braford cattle with different levels of resistance in response to tick infestation, contributing to the search of candidate genes for tick resistance in bovine.
650 $aCattle
650 $aGene expression
650 $aRhipicephalus microplus
650 $aTick infestations
650 $aBovino
650 $aCarrapato
650 $aResistência
650 $aResistência Genética
653 $aBovine
653 $aBraford
653 $aEnrichment analysis
653 $aExpressão gênica
653 $aGado Braford
653 $aNetwork analysis
653 $aRNA-Seq
700 1 $aCARDOSO, F. F.
700 1 $aMUDADU, M. de A.
700 1 $aMALAGO JUNIOR, W.
700 1 $aGULIAS GOMES, C. C.
700 1 $aSOLLERO, B. P.
700 1 $aIBELLI, A. M. G.
700 1 $aCOUTINHO, L. L.
700 1 $aREGITANO, L. C. de A.
773 $tBMC Genomics$gv. 20, n. 998, 2019.
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Registro original: |
Embrapa Pecuária Sul (CPPSUL) |
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Biblioteca |
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Tipo/Formato |
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Registro |
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URL |
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| Registros recuperados : 108 | |
| 81. |  | SIMÕES, M. R. S.; LEAL, J. J. B.; MINHO, A. P.; GULIAS GOMES, C. C.; MACNEIL, M. D.; COSTA, R. F.; JUNQUEIRA, V. S.; SCHMIDT, P. I.; CARDOSO, F. F.; BOLIGON, A. A.; YOKOO, M. J. I. Breeding objectives of Brangus cattle in Brazil. Journal of Animal Breeding Genetics, v. 37, n. 2, p. 177-188, Mar. 2019.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Pecuária Sudeste. |
|   |
| 82. | | SIMÕES, M. R. S.; LEAL, J. J. B.; MINHO, A. P.; GULIAS GOMES, C. C.; MACNEIL, M. D.; COSTA, R. F.; JUNQUEIRA, V. S.; SCHMIDT, P. I.; CARDOSO, F. F.; BOLIGON, A. A.; YOKOO, M. J. I. Breeding objectives of Brangus cattle in Brazil. Journal of Animal Breeding and Genetics, v. 137, n. 2, p. 177-188, Mar. 2020.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Pecuária Sul. |
|  |
| 83. | | CAMPOS, G. S.; CARDOSO, F. F.; GULIAS GOMES, C. C.; DOMINGUES, R.; REGITANO, L. C. de A.; OLIVEIRA, M. C. de S.; OLIVEIRA, H. N. DE; CARVALHEIRO, R.; ALBUQUERQUE, L. G.; MILLER, S.; MISTZAL, I.; LOURENCO, D. Development of genomic predictions for Angus cattle in Brazil incorporating genotypes from related american sires. Journal of Animal Science, v. 100, n. 2, p. 1-13, Feb. 2022. skac009.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Pecuária Sudeste; Embrapa Pecuária Sul. |
|  |
| 84. | | MORÉ, D. D.; CARDOSO, F. F.; MUDADU, M. de A.; MALAGO JUNIOR, W.; GULIAS GOMES, C. C.; SOLLERO, B. P.; IBELLI, A. M. G.; COUTINHO, L. L.; REGITANO, L. C. de A. Network analysis uncovers putative genes affecting resistance to tick infestation in Braford cattle skin. BMC Genomics, v. 20, n. 998, 2019.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste; Embrapa Pecuária Sul; Embrapa Suínos e Aves. |
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| 85. | | CARDOSO, F. F.; MATIKA, O.; DJIKENG, A.; MAPHOLI, N.; BURROW, H. M.; YOKOO, M. J. I.; CAMPOS, G. S.; GULIAS GOMES, C. C.; RIGGIO, V.; PONG-WONG, R.; ENGLE, B.; PORTO-NETO, L.; MAIWASHE, A.; HAYES, B. J. Multiple country and breed genomic prediction of tick resistance in beef cattle. Frontiers in Immunology, v. 12, 620847, June 2021.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Pecuária Sul. |
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| 86. | | MINHO, A. P.; SOLLERO, B. P.; SOUZA, C. J. H. de; GULIAS GOMES, C. C.; OSMARI, E. K.; TRENTIN, G.; YOKOO, M. J. I.; PEREZ, N. B.; RODRIGUES, P. F.; SUÑÉ, R. W. Pecuária de precisão na prática. Porto Alegre: Senar; Bagé: Embrapa Pecuária Sul, [2017]. 11 p. Título retirado da capa.| Tipo: Folder/Folheto/Cartilha |
| Biblioteca(s): Embrapa Pecuária Sul. |
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| 87. | | CAVANI, L.; CARDOSO, F. F.; GULIAS GOMES, C. C.; CAETANO, A. R.; SILVA, N. M. A. da; GIGLIOTI, R.; OKINO, C. H.; OLIVEIRA, M. C. de S.; OLIVEIRA, H. N. Quantificação e estimativas de parâmetros genéticos de níveis de infecção de Babesia bovis em bovinos Braford e Hereford. In: SIMPÓSIO BRASILEIRO DE MELHORAMENTO ANIMAL, 12., 2017, Ribeirão Preto. Anais... Ribeirão Preto: SBMA, 2017. 1 CD-ROM. SBMA.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 88. | | CAVANI, L.; CARDOSO, F. F.; GULIAS GOMES, C. C.; CAETANO, A. R.; SILVA, N. M. A. da; GIGLIOTI, R.; OKINO, C. H.; OLIVEIRA, M. C. de S.; OLIVEIRA, H. N. Quantificação e estimativas de parâmetros genéticos de níveis de infecção de Babesia bovis em bovinos Braford e Hereford. In: SIMPÓSIO BRASILEIRO DE MELHORAMENTO ANIMAL, 12., 2017, Ribeirão Preto. Anais... Ribeirão Preto: SBMA, 2017. 1 CD-ROM. SBMA.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 89. | | CAVANI, L.; CARDOSO, F. F.; GULIAS GOMES, C. C.; CAETANO, A. R.; SILVA, N. M. A. da; GIGLIOTI, R.; OKINO, C. H.; OLIVEIRA, M. C. de S.; OLIVEIRA, H. N. Quantificação e estimativas de parâmetros genéticos de níveis de infecção de Babesia bovis em bovinos Braford e Hereford. In: SIMPÓSIO BRASILEIRO DE MELHORAMENTO ANIMAL, 12., 2017, Ribeirão Preto. Anais... Ribeirão Preto: SBMA, 2017. 1 CD-ROM. SBMA.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Pecuária Sul. |
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| 90. | | CAVANI, L.; LOPES, F. B.; GIGLIOTID, R.; BRESOLIN, T.; CAMPOS, G. S.; OKINO, C. H.; GULIAS-GOMES, C. C.; CAETANO, A. R.; OLIVEIRA, M. C. de S.; CARDOSO, F. F.; ROSA, G. J. de M.; OLIVEIRA, H. N. de. Inferring phenotypic causal networks for tick infestation, Babesia bovis infection, and weight gain in Hereford and Braford cattle using structural equation models. Livestock Science, v. 238, 2020.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 91. | | CAVANI, L.; LOPES, F. B.; GIGLIOTI, R.; BRESOLIN, T.; CAMPOS, G. S.; OKINO, C. H.; GULIAS-GOMES, C. C.; CAETANO, A. R.; OLIVEIRA, M. C. de S.; CARDOSO, F. F.; ROSA, G. J. de M.; OLIVEIRA, H. N. de. Inferring phenotypic causal networks for tick infestation, Babesia bovis infection, and weight gain in Hereford and Braford cattle using structural equation models. Livestock Science, v. 238, aug. 2020, 104032. 8 p.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Pecuária Sudeste; Embrapa Pecuária Sul. |
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| 92. | | CARDOSO, F. F.; REIMANN, F. A.; YOKOO, M. J. I.; GULIAS GOMES, C. C.; SOLLERO, B. P.; CAMPOS, G. S.; ROSO, V. M.; BRITO, F. V.; CAETANO, A. R. Selección genómica para mejorar la adaptación tropical de la raza Hereford. Anuario Hereford, Montevideo, p. 146-152, 2017. Também publicada em português no VI Congreso da Asociación Uruguaya de Producción Animal, março de 2018.| Tipo: Artigo de Divulgação na Mídia |
| Biblioteca(s): Embrapa Pecuária Sul. |
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| 93. | | YOKOO, M. J. I.; LEAL, J. J. B.; CARDOSO, F. F.; CARDOSO, L. L.; CARVALHO, H. G. de; GASPAR, E. B.; BENAVIDES, M. V.; GULIAS GOMES, C. C.; DOMINGUES, R. Sumário genômico para características de difícil mensuração de animais da raça Brangus : setembro de 2022. 2. ed. Bagé: Embrapa Pecuária Sul, 2022. 49 p. (Embrapa Pecuária Sul. Documentos, 169). ODS 2.| Biblioteca(s): Embrapa Pecuária Sul. |
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| 94. | | CAMPOS, G. S.; REIMANN, F. A.; JUNQUEIRA, V. S.; BRACCINI, J.; CARDOSO, L. L.; YOKOO, M. J. I.; SOLLERO, B. P.; GULIAS GOMES, C. C.; BOLIGON, A. A.; CAETANO, A. R.; CARDOSO, F. F. Tag-SNP selection using Bayesian genome-wide association study for growth and adaptation traits in Hereford and Braford cattle. In: WORLD CONGRESS ON GENETICS APPLIED TO LIVESTOCK PRODUCTION, 11., 2018, Auckland, New Zealand. Proceedings... Massey University, 2018.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 95. | | CAMPOS, G. S.; REIMANN, F. A.; JUNQUEIRA, V. S.; BRACCINI, J.; CARDOSO, L. L.; YOKOO, M. J. I.; SOLLERO, B. P.; GULIAS GOMES, C. C.; BOLIGON, A. A.; CAETANO, A. R.; CARDOSO, F. F. Tag-SNP selection using Bayesian genome-wide association study for growth and adaptation traits in Hereford and Braford cattle. In: WORLD CONGRESS ON GENETICS APPLIED TO LIVESTOCK PRODUCTION, 11., 2018, Auckland, New Zealand. Proceedings... Massey University, 2018. Digital Archive.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Pecuária Sul. |
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| 96. | | ROMERO, A. R. da S.; NASCIMENTO, A. V. do; OLIVEIRA, M. C. de S.; OKINO, C. H.; BRAZ, C. U.; SCALEZ, D. C. B.; CARDOSO, D. F.; CARDOSO, F. F.; GULIAS GOMES, C. C.; CAETANO, A. R.; TONHATI, H.; GONDRO, C.; OLIVEIRA, H. N. de. Genetic parameters and multi-trait genomic prediction for hemoparasites infection levels in cattle. Livestock Science, v. 273, 2023. 105259. 7 p.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Pecuária Sudeste; Embrapa Pecuária Sul; Embrapa Recursos Genéticos e Biotecnologia. |
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| 97. | | CARDOSO, F. F.; GULIAS-GOMES, C. C.; OLIVEIRA, M. M.; ROSO, V. M.; PICCOLI, M. L.; BRITO, F. V.; HIGA, R. H.; PAIVA, S. R.; SILVA, M. V. G. B.; REGITANO, L. C. de A.; YOKOO, M. J.; CAETANO, A. R.; MISZTAL, I.; AGUILAR, I. Genomic selection for tick resistance in Braford and Hereford cattle using single-step methodology. In: CONFERENCE OF INTERNATIONAL SOCIETY FOR ANIMAL GENETICS, 33., 2012, Cairns. Programme and abstract book. Cairns: ISAG, 2012. p. 97-98. 1 CD-ROM. ISAG, 2012.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 98. | | CARDOSO, F. F.; GULIAS-GOMES, C. C.; OLIVEIRA, M. M.; ROSO, V. M.; PICCOLI, M. L.; BRITO, F. V.; HIGA, R. H.; PAIVA, S. R.; SILVA, M. V. G. B.; REGITANO, L. C. de A.; YOKOO, M. J.; CAETANO, A. R.; MISZTAL, I.; AGUILAR, I. Genomic selection for tick resistance in Braford and Hereford cattle using single-step methodology. In: CONFERENCE OF INTERNATIONAL SOCIETY FOR ANIMAL GENETICS, 33., 2012, Cairns, AU. Abstracts... Cairns: ISAG, 2012. p. 97-98. ISAG, 2012.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 99. | | CARDOSO, F. F.; GULIAS-GOMES, C. C.; OLIVEIRA, M. M.; ROSO, V. M.; PICCOLI, M. L.; BRITO, F. V.; HIGA, R. H.; PAIVA, S. R.; SILVA, M. V. G. B.; REGITANO, L. C. de A.; YOKOO, M. J. I.; CAETANO, A. R.; MISZTAL, I.; AGUILAR, I. Genomic select for tick resistance in Bradford and Hereford cattle using single-step methodology. In: CONFERENCE OF THE INTERNATIONAL SOCIETY FOR ANIMAL GENETICS, 33., 2012, Cairns. Programme and abstract book... Cairns: ISAG, 2012.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Gado de Leite. |
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| 100. | | CARDOSO, F. F.; GULIAS GOMES, C. C.; OLIVEIRA, M. M. de; ROSO, V. M.; PICCOLI, M. L.; BRITO, F. V.; HIGA, R. H.; PAIVA, S. R.; SILVA, M. V. G. B.; REGITANO, L. C. de A.; CAETANO, A. R.; AGUILAR, I. Predição da resistência genética ao carrapato de bovinos Braford e Hereford a partir de um painel denso de marcadores moleculares. Bagé: Embrapa Pecuária Sul, 2011. 6 p. il. (Embrapa Pecuária Sul. Circular Técnica, 41).| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sul. |
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| Registros recuperados : 108 | |
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| Nenhum registro encontrado para a expressão de busca informada. |
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