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Registro Completo |
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Biblioteca(s): |
Embrapa Pecuária Sul. |
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Data corrente: |
02/07/2021 |
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Data da última atualização: |
29/04/2024 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
CARDOSO, F. F.; MATIKA, O.; DJIKENG, A.; MAPHOLI, N.; BURROW, H. M.; YOKOO, M. J. I.; CAMPOS, G. S.; GULIAS GOMES, C. C.; RIGGIO, V.; PONG-WONG, R.; ENGLE, B.; PORTO-NETO, L.; MAIWASHE, A.; HAYES, B. J. |
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Afiliação: |
FERNANDO FLORES CARDOSO, CPPSUL; OSWALD MATIKA, UNIVERSITY OF EDINBURGH; APPOLINAIRE DJIKENG, UNIVERSITY OF EDINBURGH; NTANGANEDZENI MAPHOLI, UNIVERSITY OF SOUTH AFRICA; HEATHER M. BURROW, UNIVERSITY OF NEW ENGLAND; MARCOS JUN ITI YOKOO, CPPSUL; GABRIEL SOARES CAMPOS; CLAUDIA CRISTINA GULIAS GOMES, CPPSUL; VALENTINA RIGGIO, UNIVERSITY OF EDINBURGH; RICARDO PONG-WONG, UNIVERSITY OF EDINBURGH; BAILEY ENGLE, UNIVERSITY OF NEW ENGLAND; LAERCIO PORTO-NETO, CSIRO; AZWIHANGWISI MAIWASHE, AGRICULTURAL RESEARCH COUNCIL; BEN J. HAYES, UNIVERSITY OF QUEENSLAND. |
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Título: |
Multiple country and breed genomic prediction of tick resistance in beef cattle. |
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Ano de publicação: |
2021 |
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Fonte/Imprenta: |
Frontiers in Immunology, v. 12, 620847, June 2021. |
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DOI: |
10.3389/fimmu.2021.620847 |
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Idioma: |
Inglês |
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Conteúdo: |
Ticks cause substantial production losses for beef and dairy cattle. Cattle resistance to ticks is one of the most important factors affecting tick control, but largely neglected due to the challenge of phenotyping. In this study, we evaluate the pooling of tick resistance phenotyped reference populations from multi-country beef cattle breeds to assess the possibility of improving host resistance through multi-trait genomic selection. Data consisted of tick counts or scores assessing the number of female ticks at least 4.5 mm length and derived from seven populations, with breed, country, number of records and genotyped/phenotyped animals being respectively: Angus (AN), Brazil, 2,263, 921/1,156, Hereford (HH), Brazil, 6,615, 1,910/2,802, Brangus (BN), Brazil, 2,441, 851/851, Braford (BO), Brazil, 9,523, 3,062/4,095, Tropical Composite (TC), Australia, 229, 229/229, Brahman (BR), Australia, 675, 675/675, and Nguni (NG), South Africa, 490, 490/490. All populations were genotyped using medium density Illumina SNP BeadChips and imputed to a common high-density panel of 332,468 markers. The mean linkage disequilibrium (LD) between adjacent SNPs varied from 0.24 to 0.37 across populations and so was sufficient to allow genomic breeding values (GEBV) prediction. Correlations of LD phase between breeds were higher between composites and their founder breeds (0.81 to 0.95) and lower between NG and the other breeds (0.27 and 0.35). There was wide range of estimated heritability (0.05 and 0.42) and genetic correlation (-0.01 and 0.87) for tick resistance across the studied populations, with the largest genetic correlation observed between BN and BO. Predictive ability was improved under the old-young validation for three of the seven populations using a multi-trait approach compared to a single trait within-population prediction, while whole and partial data GEBV correlations increased in all cases, with relative improvements ranging from 3% for BO to 64% for TC. Moreover, the multi-trait analysiswas useful to correct typical over-dispersion of the GEBV. Results from this study indicate that a joint genomic evaluation of AN, HH, BN, BO and BR can be readily implemented to improve tick resistance of these populations using selection on GEBV. For NG and TC additional phenotyping will be required to obtain accurate GEBV. Keywords: beef cattle, genomic selection, ticks, tropical adaptation, host resistance MenosTicks cause substantial production losses for beef and dairy cattle. Cattle resistance to ticks is one of the most important factors affecting tick control, but largely neglected due to the challenge of phenotyping. In this study, we evaluate the pooling of tick resistance phenotyped reference populations from multi-country beef cattle breeds to assess the possibility of improving host resistance through multi-trait genomic selection. Data consisted of tick counts or scores assessing the number of female ticks at least 4.5 mm length and derived from seven populations, with breed, country, number of records and genotyped/phenotyped animals being respectively: Angus (AN), Brazil, 2,263, 921/1,156, Hereford (HH), Brazil, 6,615, 1,910/2,802, Brangus (BN), Brazil, 2,441, 851/851, Braford (BO), Brazil, 9,523, 3,062/4,095, Tropical Composite (TC), Australia, 229, 229/229, Brahman (BR), Australia, 675, 675/675, and Nguni (NG), South Africa, 490, 490/490. All populations were genotyped using medium density Illumina SNP BeadChips and imputed to a common high-density panel of 332,468 markers. The mean linkage disequilibrium (LD) between adjacent SNPs varied from 0.24 to 0.37 across populations and so was sufficient to allow genomic breeding values (GEBV) prediction. Correlations of LD phase between breeds were higher between composites and their founder breeds (0.81 to 0.95) and lower between NG and the other breeds (0.27 and 0.35). There was wide range of estimated heritability (0.05 ... Mostrar Tudo |
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Thesagro: |
Carrapato; Gado de Corte; Genoma; Seleção. |
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Categoria do assunto: |
-- |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/224266/1/Cardoso-FF-et-al-2021-Front.-Immunol.-12-620847.pdf
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Marc: |
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001 2132754
005 2024-04-29
008 2021 bl uuuu u00u1 u #d
024 7 $a10.3389/fimmu.2021.620847$2DOI
100 1 $aCARDOSO, F. F.
245 $aMultiple country and breed genomic prediction of tick resistance in beef cattle.$h[electronic resource]
260 $c2021
520 $aTicks cause substantial production losses for beef and dairy cattle. Cattle resistance to ticks is one of the most important factors affecting tick control, but largely neglected due to the challenge of phenotyping. In this study, we evaluate the pooling of tick resistance phenotyped reference populations from multi-country beef cattle breeds to assess the possibility of improving host resistance through multi-trait genomic selection. Data consisted of tick counts or scores assessing the number of female ticks at least 4.5 mm length and derived from seven populations, with breed, country, number of records and genotyped/phenotyped animals being respectively: Angus (AN), Brazil, 2,263, 921/1,156, Hereford (HH), Brazil, 6,615, 1,910/2,802, Brangus (BN), Brazil, 2,441, 851/851, Braford (BO), Brazil, 9,523, 3,062/4,095, Tropical Composite (TC), Australia, 229, 229/229, Brahman (BR), Australia, 675, 675/675, and Nguni (NG), South Africa, 490, 490/490. All populations were genotyped using medium density Illumina SNP BeadChips and imputed to a common high-density panel of 332,468 markers. The mean linkage disequilibrium (LD) between adjacent SNPs varied from 0.24 to 0.37 across populations and so was sufficient to allow genomic breeding values (GEBV) prediction. Correlations of LD phase between breeds were higher between composites and their founder breeds (0.81 to 0.95) and lower between NG and the other breeds (0.27 and 0.35). There was wide range of estimated heritability (0.05 and 0.42) and genetic correlation (-0.01 and 0.87) for tick resistance across the studied populations, with the largest genetic correlation observed between BN and BO. Predictive ability was improved under the old-young validation for three of the seven populations using a multi-trait approach compared to a single trait within-population prediction, while whole and partial data GEBV correlations increased in all cases, with relative improvements ranging from 3% for BO to 64% for TC. Moreover, the multi-trait analysiswas useful to correct typical over-dispersion of the GEBV. Results from this study indicate that a joint genomic evaluation of AN, HH, BN, BO and BR can be readily implemented to improve tick resistance of these populations using selection on GEBV. For NG and TC additional phenotyping will be required to obtain accurate GEBV. Keywords: beef cattle, genomic selection, ticks, tropical adaptation, host resistance
650 $aCarrapato
650 $aGado de Corte
650 $aGenoma
650 $aSeleção
700 1 $aMATIKA, O.
700 1 $aDJIKENG, A.
700 1 $aMAPHOLI, N.
700 1 $aBURROW, H. M.
700 1 $aYOKOO, M. J. I.
700 1 $aCAMPOS, G. S.
700 1 $aGULIAS GOMES, C. C.
700 1 $aRIGGIO, V.
700 1 $aPONG-WONG, R.
700 1 $aENGLE, B.
700 1 $aPORTO-NETO, L.
700 1 $aMAIWASHE, A.
700 1 $aHAYES, B. J.
773 $tFrontiers in Immunology$gv. 12, 620847, June 2021.
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Registro original: |
Embrapa Pecuária Sul (CPPSUL) |
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Biblioteca |
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Origem |
Tipo/Formato |
Classificação |
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Registro |
Volume |
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URL |
Voltar
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| Registros recuperados : 108 | |
| 81. |  | MORÉ, D. D.; MALAGO JUNIOR, W.; MUDADU, M. de A.; ZERLOTINI NETO, A.; GULIAS-GOMES, C. C.; IBELLI, A. M. G.; CATOIA, V.; CARDOSO, F. F.; REGITANO, L. C. de A. Genetics mechanisms of resistance and response to tick infestation in Hereford cattle: a global view. In: INTERNATIONAL SYMPOSIUM ON ANIMAL FUNCTIONAL GENOMICS, 5., 2013, Guarujá. Abstract... Guarujá:[ s.n.], 2013. AB.59.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste; Embrapa Pecuária Sul. |
|    |
| 82. | | CARDOSO, F. F.; GULIAS-GOMES, C. C.; OLIVEIRA, M. M.; ROSO, V. M.; PICCOLI, M. L.; BRITO, F. V.; HIGA, R. H.; PAIVA, S. R.; SILVA, M. V. G. B.; REGITANO, L. C. de A.; YOKOO, M. J. I. Genomic selection for tick resistance in Braford and Hereford cattle using single-step methodology. In: CONFERENCE OF THE INTERNATIONAL SOCIETY FOR ANIMAL GENETICS, 33., 2012, Cairns. Programme and abstract book... Cairns: ISAG, 2012. p. 97-98.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Pecuária Sul. |
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| 83. | | CAVANI, L.; BRAZ, C. U.; GIGLIOTI, R.; OKINO, C. H.; GULIAS GOMES, C. C.; CAETANO, A. R.; OLIVEIRA, M. C. de S.; CARDOSO, F. F.; OLIVEIRA, H. N. de. Genomic study of Babesia bovis infection level and its association with tick count in Hereford and Braford cattle. Frontiers in Immunology, v. 11, article 1905, aug. 2020. 11 p.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Pecuária Sudeste; Embrapa Pecuária Sul; Embrapa Recursos Genéticos e Biotecnologia. |
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| 84. | | CAVANI, L.; LOPES, F. B.; GIGLIOTID, R.; BRESOLIN, T.; CAMPOS, G. S.; OKINO, C. H.; GULIAS-GOMES, C. C.; CAETANO, A. R.; OLIVEIRA, M. C. de S.; CARDOSO, F. F.; ROSA, G. J. de M.; OLIVEIRA, H. N. de. Inferring phenotypic causal networks for tick infestation, Babesia bovis infection, and weight gain in Hereford and Braford cattle using structural equation models. Livestock Science, v. 238, 2020.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 85. | | CAVANI, L.; LOPES, F. B.; GIGLIOTI, R.; BRESOLIN, T.; CAMPOS, G. S.; OKINO, C. H.; GULIAS-GOMES, C. C.; CAETANO, A. R.; OLIVEIRA, M. C. de S.; CARDOSO, F. F.; ROSA, G. J. de M.; OLIVEIRA, H. N. de. Inferring phenotypic causal networks for tick infestation, Babesia bovis infection, and weight gain in Hereford and Braford cattle using structural equation models. Livestock Science, v. 238, aug. 2020, 104032. 8 p.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Pecuária Sudeste; Embrapa Pecuária Sul. |
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| 86. | | CAMPOS, G. S.; CARDOSO, F. F.; GULIAS GOMES, C. C.; DOMINGUES, R.; REGITANO, L. C. de A.; OLIVEIRA, M. C. de S.; OLIVEIRA, H. N. DE; CARVALHEIRO, R.; ALBUQUERQUE, L. G.; MILLER, S.; MISTZAL, I.; LOURENCO, D. Development of genomic predictions for Angus cattle in Brazil incorporating genotypes from related american sires. Journal of Animal Science, v. 100, n. 2, p. 1-13, Feb. 2022. skac009.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Pecuária Sudeste; Embrapa Pecuária Sul. |
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| 87. | | MORÉ, D. D.; CARDOSO, F. F.; MUDADU, M. de A.; MALAGO JUNIOR, W.; GULIAS GOMES, C. C.; SOLLERO, B. P.; IBELLI, A. M. G.; COUTINHO, L. L.; REGITANO, L. C. de A. Network analysis uncovers putative genes affecting resistance to tick infestation in Braford cattle skin. BMC Genomics, v. 20, n. 998, 2019.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste; Embrapa Pecuária Sul; Embrapa Suínos e Aves. |
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| 88. | | CARDOSO, F. F.; MATIKA, O.; DJIKENG, A.; MAPHOLI, N.; BURROW, H. M.; YOKOO, M. J. I.; CAMPOS, G. S.; GULIAS GOMES, C. C.; RIGGIO, V.; PONG-WONG, R.; ENGLE, B.; PORTO-NETO, L.; MAIWASHE, A.; HAYES, B. J. Multiple country and breed genomic prediction of tick resistance in beef cattle. Frontiers in Immunology, v. 12, 620847, June 2021.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Pecuária Sul. |
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| 89. | | CAVANI, L.; CARDOSO, F. F.; GULIAS GOMES, C. C.; CAETANO, A. R.; SILVA, N. M. A. da; GIGLIOTI, R.; OKINO, C. H.; OLIVEIRA, M. C. de S.; OLIVEIRA, H. N. Quantificação e estimativas de parâmetros genéticos de níveis de infecção de Babesia bovis em bovinos Braford e Hereford. In: SIMPÓSIO BRASILEIRO DE MELHORAMENTO ANIMAL, 12., 2017, Ribeirão Preto. Anais... Ribeirão Preto: SBMA, 2017. 1 CD-ROM. SBMA.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 90. | | CAVANI, L.; CARDOSO, F. F.; GULIAS GOMES, C. C.; CAETANO, A. R.; SILVA, N. M. A. da; GIGLIOTI, R.; OKINO, C. H.; OLIVEIRA, M. C. de S.; OLIVEIRA, H. N. Quantificação e estimativas de parâmetros genéticos de níveis de infecção de Babesia bovis em bovinos Braford e Hereford. In: SIMPÓSIO BRASILEIRO DE MELHORAMENTO ANIMAL, 12., 2017, Ribeirão Preto. Anais... Ribeirão Preto: SBMA, 2017. 1 CD-ROM. SBMA.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 91. | | CAVANI, L.; CARDOSO, F. F.; GULIAS GOMES, C. C.; CAETANO, A. R.; SILVA, N. M. A. da; GIGLIOTI, R.; OKINO, C. H.; OLIVEIRA, M. C. de S.; OLIVEIRA, H. N. Quantificação e estimativas de parâmetros genéticos de níveis de infecção de Babesia bovis em bovinos Braford e Hereford. In: SIMPÓSIO BRASILEIRO DE MELHORAMENTO ANIMAL, 12., 2017, Ribeirão Preto. Anais... Ribeirão Preto: SBMA, 2017. 1 CD-ROM. SBMA.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Pecuária Sul. |
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| 92. | | CARDOSO, F. F.; REIMANN, F. A.; YOKOO, M. J. I.; GULIAS GOMES, C. C.; SOLLERO, B. P.; CAMPOS, G. S.; ROSO, V. M.; BRITO, F. V.; CAETANO, A. R. Selección genómica para mejorar la adaptación tropical de la raza Hereford. Anuario Hereford, Montevideo, p. 146-152, 2017. Também publicada em português no VI Congreso da Asociación Uruguaya de Producción Animal, março de 2018.| Tipo: Artigo de Divulgação na Mídia |
| Biblioteca(s): Embrapa Pecuária Sul. |
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| 93. | | YOKOO, M. J. I.; LEAL, J. J. B.; CARDOSO, F. F.; CARDOSO, L. L.; CARVALHO, H. G. de; GASPAR, E. B.; BENAVIDES, M. V.; GULIAS GOMES, C. C.; DOMINGUES, R. Sumário genômico para características de difícil mensuração de animais da raça Brangus : setembro de 2022. 2. ed. Bagé: Embrapa Pecuária Sul, 2022. 49 p. (Embrapa Pecuária Sul. Documentos, 169). ODS 2.| Biblioteca(s): Embrapa Pecuária Sul. |
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| 94. | | CAMPOS, G. S.; REIMANN, F. A.; JUNQUEIRA, V. S.; BRACCINI, J.; CARDOSO, L. L.; YOKOO, M. J. I.; SOLLERO, B. P.; GULIAS GOMES, C. C.; BOLIGON, A. A.; CAETANO, A. R.; CARDOSO, F. F. Tag-SNP selection using Bayesian genome-wide association study for growth and adaptation traits in Hereford and Braford cattle. In: WORLD CONGRESS ON GENETICS APPLIED TO LIVESTOCK PRODUCTION, 11., 2018, Auckland, New Zealand. Proceedings... Massey University, 2018.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 95. | | CAMPOS, G. S.; REIMANN, F. A.; JUNQUEIRA, V. S.; BRACCINI, J.; CARDOSO, L. L.; YOKOO, M. J. I.; SOLLERO, B. P.; GULIAS GOMES, C. C.; BOLIGON, A. A.; CAETANO, A. R.; CARDOSO, F. F. Tag-SNP selection using Bayesian genome-wide association study for growth and adaptation traits in Hereford and Braford cattle. In: WORLD CONGRESS ON GENETICS APPLIED TO LIVESTOCK PRODUCTION, 11., 2018, Auckland, New Zealand. Proceedings... Massey University, 2018. Digital Archive.| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Pecuária Sul. |
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| 96. | | CARDOSO, F. F.; GULIAS GOMES, C. C.; OLIVEIRA, M. M. de; ROSO, V. M.; PICCOLI, M. L.; BRITO, F. V.; HIGA, R. H.; PAIVA, S. R.; SILVA, M. V. G. B.; REGITANO, L. C. de A.; CAETANO, A. R.; AGUILAR, I. Predição da resistência genética ao carrapato de bovinos Braford e Hereford a partir de um painel denso de marcadores moleculares. Bagé: Embrapa Pecuária Sul, 2011. 6 p. il. (Embrapa Pecuária Sul. Circular Técnica, 41).| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sul. |
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| 97. | | CARDOSO, F. F.; GULIAS-GOMES, C. C.; OLIVEIRA, M. M.; ROSO, V. M.; PICCOLI, M. L.; BRITO, F. V.; HIGA, R. H.; PAIVA, S. R.; SILVA, M. V. G. B.; REGITANO, L. C. de A.; YOKOO, M. J.; CAETANO, A. R.; MISZTAL, I.; AGUILAR, I. Genomic selection for tick resistance in Braford and Hereford cattle using single-step methodology. In: CONFERENCE OF INTERNATIONAL SOCIETY FOR ANIMAL GENETICS, 33., 2012, Cairns. Programme and abstract book. Cairns: ISAG, 2012. p. 97-98. 1 CD-ROM. ISAG, 2012.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 98. | | CARDOSO, F. F.; GULIAS-GOMES, C. C.; OLIVEIRA, M. M.; ROSO, V. M.; PICCOLI, M. L.; BRITO, F. V.; HIGA, R. H.; PAIVA, S. R.; SILVA, M. V. G. B.; REGITANO, L. C. de A.; YOKOO, M. J.; CAETANO, A. R.; MISZTAL, I.; AGUILAR, I. Genomic selection for tick resistance in Braford and Hereford cattle using single-step methodology. In: CONFERENCE OF INTERNATIONAL SOCIETY FOR ANIMAL GENETICS, 33., 2012, Cairns, AU. Abstracts... Cairns: ISAG, 2012. p. 97-98. ISAG, 2012.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Agricultura Digital; Embrapa Pecuária Sudeste. |
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| 99. | | CARDOSO, F. F.; GULIAS-GOMES, C. C.; OLIVEIRA, M. M.; ROSO, V. M.; PICCOLI, M. L.; BRITO, F. V.; HIGA, R. H.; PAIVA, S. R.; SILVA, M. V. G. B.; REGITANO, L. C. de A.; YOKOO, M. J. I.; CAETANO, A. R.; MISZTAL, I.; AGUILAR, I. Genomic select for tick resistance in Bradford and Hereford cattle using single-step methodology. In: CONFERENCE OF THE INTERNATIONAL SOCIETY FOR ANIMAL GENETICS, 33., 2012, Cairns. Programme and abstract book... Cairns: ISAG, 2012.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Gado de Leite. |
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| 100. | | ROMERO, A. R. da S.; NASCIMENTO, A. V. do; OLIVEIRA, M. C. de S.; OKINO, C. H.; BRAZ, C. U.; SCALEZ, D. C. B.; CARDOSO, D. F.; CARDOSO, F. F.; GULIAS GOMES, C. C.; CAETANO, A. R.; TONHATI, H.; GONDRO, C.; OLIVEIRA, H. N. de. Genetic parameters and multi-trait genomic prediction for hemoparasites infection levels in cattle. Livestock Science, v. 273, 2023. 105259. 7 p.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Pecuária Sudeste; Embrapa Pecuária Sul; Embrapa Recursos Genéticos e Biotecnologia. |
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| Registros recuperados : 108 | |
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| Nenhum registro encontrado para a expressão de busca informada. |
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