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 | Acesso ao texto completo restrito à biblioteca da Embrapa Agroenergia. Para informações adicionais entre em contato com cnpae.biblioteca@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Agroenergia; Embrapa Meio-Norte; Embrapa Recursos Genéticos e Biotecnologia. |
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Data corrente: |
01/11/2022 |
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Data da última atualização: |
29/11/2022 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
SALGADO, F. F.; SILVA, T. L. C. da; VIEIRA, L. R.; SILVA, V. N. B.; LEAO, A. P.; COSTA, M. M. do C.; TOGAWA, R. C.; SOUSA, C. A. F. de; GRYNBERG, P.; SOUZA JUNIOR, M. T. |
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Afiliação: |
FERNANDA FERREIRA SALGADO, UNIVERSIDADE FEDERAL DE LAVRAS; THALLITON LUIZ CARVALHO DA SILVA, UNIVERSIDADE FEDERAL DE LAVRAS; LETÍCIA RIOS VIEIRA, UNIVERSIDADE FEDERAL DE LAVRAS; VIVIANNY NAYSE BELO SILVA, UNIVERSIDADE FEDERAL DE LAVRAS; ANDRE PEREIRA LEAO, CNPAE; MARCOS MOTA DO CARMO COSTA, Cenargen; ROBERTO COITI TOGAWA, Cenargen; CARLOS ANTONIO FERREIRA DE SOUSA, CPAMN; PRISCILA GRYNBERG, Cenargen; MANOEL TEIXEIRA SOUZA JUNIOR, CNPAE. |
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Título: |
The early response of oil palm (Elaeis guineensis Jacq.) plants to water deprivation: Expression analysis of miRNAs and their putative target genes, and similarities with the response to salinity stress. |
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Ano de publicação: |
2022 |
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Fonte/Imprenta: |
Frontiers in Plant Science, n. 13, 970113, 2022. |
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DOI: |
10.3389/fpls.2022.970113 |
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Idioma: |
Inglês |
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Conteúdo: |
Oil palm (Elaeis guineensis Jacq.) is a oilseed crop of great economic importance drastically affected by abiotic stresses. MicroRNAs (miRNAs) play crucial roles in transcription and post-transcription regulation of gene expression, being essential molecules in the response of plants to abiotic stress. To better understand the molecular mechanisms behind the response of young oil palm plants to drought stress, this study reports on the prediction and characterization of miRNAs and their putative target genes in the apical leaf of plants subjected to 14 days of water deprivation. Then, the data from this study were compared to the data from a similar study that focused on salinity stress. Both, the drought-and salt-responsive miRNAs and their putative target genes underwent correlation analysis to identify similarities and dissimilarities among them. Among the 81 identified miRNAs, 29 are specific for oil palm, including two (egu-miR28ds and egu-miR29ds) new ones ? described for the first time. As for the expression profile, 62 miRNAs were significantly differentially expressed under drought stress, being five up-regulated (miR396e, miR159b, miR529b, egu-miR19sds, and egu-miR29ds) and 57 down-regulated. Transcription factors, such as MYBs, HOXs, and NF-Ys, were predicted as putative miRNA-target genes in oil palm under water deprivation; making them the most predominant group of such genes. Finally, the correlation analysis study revealed a group of putative target genes with similar behavior under salt and drought stresses. Those genes that are upregulated by these two abiotic stresses encode lncRNAs and proteins linked to stress tolerance, stress memory, modulation of ROS signaling, and defense response regulation to abiotic and biotic stresses. In summary, this study provides molecular evidence for the possible involvement of miRNAs in the drought stress response in oil palm. Besides, it shows that, at the molecular level, there are many similarities in the response of young oil palm plants to these two abiotic stresses. MenosOil palm (Elaeis guineensis Jacq.) is a oilseed crop of great economic importance drastically affected by abiotic stresses. MicroRNAs (miRNAs) play crucial roles in transcription and post-transcription regulation of gene expression, being essential molecules in the response of plants to abiotic stress. To better understand the molecular mechanisms behind the response of young oil palm plants to drought stress, this study reports on the prediction and characterization of miRNAs and their putative target genes in the apical leaf of plants subjected to 14 days of water deprivation. Then, the data from this study were compared to the data from a similar study that focused on salinity stress. Both, the drought-and salt-responsive miRNAs and their putative target genes underwent correlation analysis to identify similarities and dissimilarities among them. Among the 81 identified miRNAs, 29 are specific for oil palm, including two (egu-miR28ds and egu-miR29ds) new ones ? described for the first time. As for the expression profile, 62 miRNAs were significantly differentially expressed under drought stress, being five up-regulated (miR396e, miR159b, miR529b, egu-miR19sds, and egu-miR29ds) and 57 down-regulated. Transcription factors, such as MYBs, HOXs, and NF-Ys, were predicted as putative miRNA-target genes in oil palm under water deprivation; making them the most predominant group of such genes. Finally, the correlation analysis study revealed a group of putative target genes with... Mostrar Tudo |
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Palavras-Chave: |
LncRNA. |
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Thesaurus Nal: |
Abiotic stress; Non-coding RNA; Transcription factors; Transcriptome. |
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Categoria do assunto: |
--
X Pesquisa, Tecnologia e Engenharia |
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Marc: |
LEADER 03046naa a2200301 a 4500
001 2147993
005 2022-11-29
008 2022 bl uuuu u00u1 u #d
024 7 $a10.3389/fpls.2022.970113$2DOI
100 1 $aSALGADO, F. F.
245 $aThe early response of oil palm (Elaeis guineensis Jacq.) plants to water deprivation$bExpression analysis of miRNAs and their putative target genes, and similarities with the response to salinity stress.$h[electronic resource]
260 $c2022
520 $aOil palm (Elaeis guineensis Jacq.) is a oilseed crop of great economic importance drastically affected by abiotic stresses. MicroRNAs (miRNAs) play crucial roles in transcription and post-transcription regulation of gene expression, being essential molecules in the response of plants to abiotic stress. To better understand the molecular mechanisms behind the response of young oil palm plants to drought stress, this study reports on the prediction and characterization of miRNAs and their putative target genes in the apical leaf of plants subjected to 14 days of water deprivation. Then, the data from this study were compared to the data from a similar study that focused on salinity stress. Both, the drought-and salt-responsive miRNAs and their putative target genes underwent correlation analysis to identify similarities and dissimilarities among them. Among the 81 identified miRNAs, 29 are specific for oil palm, including two (egu-miR28ds and egu-miR29ds) new ones ? described for the first time. As for the expression profile, 62 miRNAs were significantly differentially expressed under drought stress, being five up-regulated (miR396e, miR159b, miR529b, egu-miR19sds, and egu-miR29ds) and 57 down-regulated. Transcription factors, such as MYBs, HOXs, and NF-Ys, were predicted as putative miRNA-target genes in oil palm under water deprivation; making them the most predominant group of such genes. Finally, the correlation analysis study revealed a group of putative target genes with similar behavior under salt and drought stresses. Those genes that are upregulated by these two abiotic stresses encode lncRNAs and proteins linked to stress tolerance, stress memory, modulation of ROS signaling, and defense response regulation to abiotic and biotic stresses. In summary, this study provides molecular evidence for the possible involvement of miRNAs in the drought stress response in oil palm. Besides, it shows that, at the molecular level, there are many similarities in the response of young oil palm plants to these two abiotic stresses.
650 $aAbiotic stress
650 $aNon-coding RNA
650 $aTranscription factors
650 $aTranscriptome
653 $aLncRNA
700 1 $aSILVA, T. L. C. da
700 1 $aVIEIRA, L. R.
700 1 $aSILVA, V. N. B.
700 1 $aLEAO, A. P.
700 1 $aCOSTA, M. M. do C.
700 1 $aTOGAWA, R. C.
700 1 $aSOUSA, C. A. F. de
700 1 $aGRYNBERG, P.
700 1 $aSOUZA JUNIOR, M. T.
773 $tFrontiers in Plant Science$gn. 13, 970113, 2022.
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Registro original: |
Embrapa Recursos Genéticos e Biotecnologia (CENARGEN) |
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| Registros recuperados : 81 | |
| 41. |  | FALCAO, L. L.; WERNECK, J. O. S.; TOGAWA, R. C.; COSTA, M. M. do C.; GRYNBERG, P.; SILVA JUNIOR, O. B. da; ALVES, R. M.; ALBUQUERQUE, P. S. B.; MARCELLINO, L. H. Analyses of cupuassu (Theobroma grandiflorum) transcriptome during interaction with Moniliophthora perniciosa, the causal agent of Witches' Broom disease. In: BRAZILIAN BIOTECHNOLOGY CONGRESS, 7.; BIOTECHNOLOGY IBERO-AMERICAN CONGRESS, 2., 2018, Brasília, DF. Proceedings... Brasília, DF: SBBiotec, 2018.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 42. | | FALCAO, L. L.; WERNECK, J. O. S.; TOGAWA, R. C.; COSTA, M. M. do C.; GRYNBERG, P.; SILVA JUNIOR, O. B. da; ALVES, R. M.; ALBUQUERQUE, P. S. B.; MARCELLINO, L. H. Analyses of cupuassu (Theobroma grandiflorum) transcriptome during interaction with Moniliophthora perniciosa, the causal agent of Witches' Broom disease. In: BRAZILIAN BIOTECHNOLOGY CONGRESS, 7.; BIOTECHNOLOGY IBERO-AMERICAN CONGRESS, 2., 2018, Brasília, DF. Proceedings... Brasília, DF: SBBiotec, 2018.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Amazônia Oriental. |
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| 43. | | MIDORIKAWA, G. E. O.; CORREA, C. L.; NORONHA, E. F.; FERREIRA FILHO, E. X.; TOGAWA, R. C.; COSTA, M. M. do C.; SILVA JUNIOR, O. B. da; GRYNBERG, P.; MILLER, R. N. G. Analysis of the transcriptome in Aspergillus tamarii during enzymatic degradation of sugarcane bagasse. Frontiers in Bioengineering and Biotechnology, v 6, article 123, 2018. Na publicação: Orzenil Bonfim Silva-Junior.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 3 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 44. | | VILLETH, G. R. C.; CARMO, L. S. T.; SILVA, L. P.; FONTES, W.; GRYNBERG, P.; SARAIVA, M.; BRASILEIRO, A. C. M.; CARNEIRO, R. M. D.; OLIVEIRA, J. T. A.; GROSSI-DE-SA, M. F.; MEHTA, A. Cowpea-Meloidogyne incognita interaction: root proteomic analysis during early stages of nematode infection. Proteomics, v. 15, p. 1746-1759, 2015.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 45. | | FALCAO, L. L.; WERNECK, J. O. S.; ALBUQUERQUE, P. S. B.; ALVES, R. M.; GRYNBERG, P.; TOGAWA, R. C.; COSTA, M. M. do C.; BRIGIDO, M. M.; MARCELLINO, L. H. Comparative transcriptomics of cupuassu (Theobroma grandiflorum) offers insights into the early defense mechanism to Moniliophthora perniciosa, the causal agent of witches' broom disease. Journal of Plant Interactions, v. 17, n. 1, p. 991-1005, 2022. Na publicação; Joseilde Oliveira Silva-Werneck.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Amazônia Oriental; Embrapa Recursos Genéticos e Biotecnologia. |
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| 46. | | GRYNBERG, P.; TOGAWA, R. C.; FREITAS, L. D. de; ANTONINO, J. D.; RANCUREL, C.; COSTA, M. M. do C.; GROSSI-DE-SA, M. F.; MILLER, R. N. G.; BRASILEIRO, A. C. M.; GUIMARAES, P. M.; DANCHIN, E. G. J. Comparative genomics reveals novel target genes towards specific control of plant-parasitic nematodes. Genes, v. 11, 1347, 2020.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 47. | | NORIEGA, D. D.; ARRAES, F. B. M.; ANTONINO, J. D.; MACEDO, L. L. P.; FONSECA, F. C. A.; TOGAWA, R. C.; GRYNBERG, P.; SILVA, M. C. M.; NEGRISOLI JUNIOR, A. S.; MORGANTE, C. V.; GROSSI-DE-SA, M. F. Comparative gut transcriptome analysis of Diatraea saccharalis in response to the dietary source. PLoS ONE, v. 15, n. 8, e0235575, 2020.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia; Embrapa Semiárido; Embrapa Tabuleiros Costeiros. |
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| 48. | | SARTOR, T.; FALAVIGNA, V. da S.; CATTANI, A. M.; SILVEIRA, C. P.; MALABARBA, J.; PORTO, D. D.; GRYNBERG, P.; TOGAWA, R. C.; COSTA, M. M. do C.; SANTOS, H. P. dos; PASQUALI, G.; REVERS, L. F. Caracterização da função do gene FLC-LIKE durante a transição da ENDO- para dormência na macieira. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 8, 2023, Florianópolis, SC. Anais...FLorianópolis: SBG, 30 de maio a 2 de junho de 2023. p. 67| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Uva e Vinho. |
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| 49. | | SARTOR, T.; FALAVIGNA, V. da S.; CATTANI, A. M.; SILVEIRA, C. P.; MALABARBA, J.; PORTO, D. D.; GRYNBERG, P.; TOGAWA, R. C.; COSTA, M. M. do C.; SANTOS, H. P. dos; PASQUALI, G.; REVERS, L. F. Caracterização da função do gene FLC-LIKE durante a transição da Endo- para ecodormencia na macieira. In: SIMPÓSIO BRASILEIRO DE GENÉTICA MOLECULAR DE PLANTAS, 8, 2023, Florianópolis, SC. Anais...Florianópolis: SBG, 2023. p. 67.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia; Embrapa Semiárido. |
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| 50. | | ROCHA, G. T.; QUEIROZ, P. R. M.; GRYNBERG, P.; TOGAWA, R. C.; FERREIRA, A. D. C. de L.; NASCIMENTO, I. N. do; GOMES, A. C. M. M.; MONNERAT, R. Biocontrol potential of bacteria belonging to the Bacillus subtilis group against pests and diseases of agricultural interest through genome exploration. Antonie van Leeuwenhoek, v. 116, p. 599-614, 2023.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 4 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 51. | | SALGADO, F. F.; SILVA, T. L. C. da; VIEIRA, L. R.; SILVA, V. N. B.; LEAO, A. P.; COSTA, M. M. do C.; TOGAWA, R. C.; SOUSA, C. A. F. de; GRYNBERG, P.; SOUZA JUNIOR, M. T. The early response of oil palm (Elaeis guineensis Jacq.) plants to water deprivation: Expression analysis of miRNAs and their putative target genes, and similarities with the response to salinity stress. Frontiers in Plant Science, n. 13, 970113, 2022.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Agroenergia; Embrapa Meio-Norte; Embrapa Recursos Genéticos e Biotecnologia. |
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| 52. | | MOURÃO, M. de M.; BITAR, M.; LOBO, F. P.; PECONICK, A. P.; GRYNBERG, P.; PROSDOCIMI, F.; WAISBERG, M.; CERQUEIRA, G. C.; MACEDO, A. M.; MACHADO, C. R.; YOSHINO, T.; FRANCO, G. R. A directed approach for the identification of transcripts harbouring the spliced leader sequence and the effect of trans-splicing knockdown in Schistosoma mansoni. Memórias do Instituto Oswaldo Cruz, Rio de Janeiro, v. 108, n. 6, p. 707-717, Sept. 2013.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 1 |
| Biblioteca(s): Embrapa Agricultura Digital. |
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| 53. | | ALMEIDA, R. F.; SANTOS, I. R.; MEIRA, F. S.; GRYNBERG, P.; LOPES, R.; CUNHA, R. N. V. da; FRANCO, O. L.; PEREIRA, J. E. S.; REIS, A. M. dos. Differential protein profiles in interspecific hybrids between Elaeis oleifera and E. guineensis with contrasting responses to somatic embryogenesis competence acquisition. Plant Cell, Tissue and Organ Culture, v. 137, p. 11-21, 2019. Na publicação: Jonny Everson Scherwinski-Pereira, Angela Mehta.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 54. | | MICHEREFF, M. F. F.; GRYNBERG, P.; TOGAWA, R. C.; COSTA, M. M. do C.; LAUMANN, R. A.; ZHOU, J.-J.; SCHIMMELPFENG, P. H. C.; BORGES, M.; PICKETT, J. A.; BIRKETT, M. A.; MORAES, M. C. B. Priming of indirect defence responses in maize is shown to be genotype-specific. Arthropod-Plant Interactions, v. 15, p. 313-328, 2021. Na publicação: Marcos M. C. Costa; Maria Carolina Blassioli-Moraes.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 55. | | VIEIRA, H. G. S. V.; GRYNBERG, P.; BITAR, M.; PIRES, S. da F.; HILÁRIO, H. O.; MACEDO, A. M.; MACHADO, C. R.; ANDRADE, H. M. de; FRANCO, G. R. Proteomic analysis of Trypanosoma cruzi response to ionizing radiation stress. Cell Reports, v. 9, p. 378-390, 2014. (Open Acess)| Tipo: Artigo em Periódico Indexado | Circulação/Nível: C - 0 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 56. | | RIBEIRO, D. G.; BEZERRA, A. C. M.; SANTOS, I. R.; GRYNBERG, P.; FONTES, W.; CASTRO, M. de S.; SOUSA, M. V. de; LISEI-DE-SÁ, M. E.; SA, M. F. G. de; FRANCO, O. L.; REIS, A. M. dos. Proteomic insights of Cowpea response to combined biotic and abiotic stresses. Plants, v. 12, n. 9, 1900, 2023. Na publicação: Maria Fatima Grossi-de-Sá; Angela Mehta.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 4 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 57. | | SALGADO, F. F.; VIEIRA, L. R.; SILVA, V, N. B.; LEAO, A. P.; GRYNBERG, P.; COSTA, M. M. do C.; TOGAWA, R. C.; SOUSA, C. A. F. de; SOUZA JUNIOR, M. T. Prediction and identification of miRNAS in Elaeis Guinensis Jacq and analysis of their expression in oil palm plants under salinity drought stress. In: BRAZILIAN CONGRESS OF GENETICS, 67., 2022, Natal, RN. p. 275| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 58. | | SALGADO, F. F.; VIEIRA, L. R.; SILVA, V, N. B.; LEAO, A. P.; GRYNBERG, P.; COSTA, M. M. do C.; TOGAWA, R. C.; SOUSA, C. A. F. de; SOUZA JUNIOR, M. T. Prediction and identification of miRNAS in Elaeis Guinensis Jacq and analysis of their expression in oil palm plants under salinity drought stress. In: BRAZILIAN CONGRESS OF GENETICS, 67., 2022, Natal, RN. Porto Alegre: Sociedade Brasileira de Genética, 2022. p. 275| Tipo: Artigo em Anais de Congresso |
| Biblioteca(s): Embrapa Agroenergia. |
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| 59. | | SALGADO, F. F.; VIEIRA, L. R.; SILVA, V, N. B.; LEAO, A. P.; GRYNBERG, P.; COSTA, M. M. do C.; TOGAWA, R. C.; SOUSA, C. A. F. de; SOUZA JUNIOR, M. T. Prediction and identification of miRNAS in Elaeis Guinensis Jacq and analysis of their expression in oil palm plants under salinity drought stress. In: BRAZILIAN CONGRESS OF GENETICS, 67., 2022, Natal, RN. p. 275| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Meio-Norte. |
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| 60. | | ROCHA, M. da; BOURNAUD, C.; DAZENIÈRE, J.; THORPE, P.; BAILLY-BECHET, M.; PELLEGRIN, C.; PÉRÉ, A.; GRYNBERG, P.; PERFUS-BARBEOCH, L.; AKKER, S. E.-V. den; DANCHIN, E. G. J. Genome expression dynamics reveal the parasitism regulatory landscape of the root-knot nematode Meloidogyne incognita and a promoter motif associated with effector genes. Genes (Basel), v. 12, n. 5, 771, 2021.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| Registros recuperados : 81 | |
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| Nenhum registro encontrado para a expressão de busca informada. |
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