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 | Acesso ao texto completo restrito à biblioteca da Embrapa Arroz e Feijão. Para informações adicionais entre em contato com cnpaf.biblioteca@embrapa.br. |
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Registro Completo |
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Biblioteca(s): |
Embrapa Arroz e Feijão. |
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Data corrente: |
08/09/2016 |
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Data da última atualização: |
27/04/2020 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
D'ÁVILA, L. S.; LEHNER, M. S.; FILIPPI, M. C. C.; SCHEUERMANN, K. K.; DEL PONTE, E. M. |
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Afiliação: |
LEILANE S. D'AVILA, UNIVERSIDADE FEDERAL DO RIO GRANDE DO SUL, Porto Alegre-RS; MILLER S. LEHNER, UNIVERSIDADE FEDERAL DE VIÇOSA; MARTA CRISTINA CORSI DE FILIPPI, CNPAF; KLAUS K. SCHEUERMANN, EPAGRI; EMERSON M. DEL PONTE, UNIVERSIDADE FEDERAL DE VIÇOSA. |
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Título: |
Genetic structure and mating type analysis of the Pyricularia oryzae population causing widespread epidemics in southern Brazil. |
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Ano de publicação: |
2016 |
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Fonte/Imprenta: |
Tropical Plant Pathology, Brasília, DF, v. 41, n. 6, p. 297-305, Oct. 2016. |
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DOI: |
10.1007/s40858-016-0101-9 |
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Idioma: |
Inglês |
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Conteúdo: |
Blast is a major disease of rice in Brazil, the largest rice-producing country outside Asia. This study aimed to assess the genetic structure and mating-type frequency in a contemporary Pyricularia oryzae population, which caused widespread epidemics during the 2012/13 season in the Brazilian lowland subtropical region. Symptomatic leaves and panicles were sampled at flooded rice fields in the states of Rio Grande do Sul (RS, 34 fields) and Santa Catarina (SC, 21 fields). The polymorphism at ten simple sequence repeats (SSR or microsatellite) loci and the presence of MAT1-1 or MAT1-2 idiomorphs were assessed in a population comprised of 187 isolates. Only the MAT1-2 idiomorph was found and 162 genotypes were identified by the SSR analysis. A discriminant analysis of principal components (DAPC) of SSR data resolved four genetic groups, which were strongly associated with the cultivar of origin of the isolates. There was high level of genotypic diversity and moderate level of gene diversity regardless whether isolates were grouped in subpopulations based on geographic region, cultivar host or cultivar within region. While regional subpopulations were weakly differentiated, high genetic differentiation was found among subpopulations comprised of isolates from different cultivars. The data suggest that the rice blast pathogen population in southern Brazil is comprised of clonal lineages that are adapting to specific cultivar hosts. Farmers should avoid the use of susceptible cultivars over large areas and breeders should focus at enlarging the genetic basis of new cultivars. MenosBlast is a major disease of rice in Brazil, the largest rice-producing country outside Asia. This study aimed to assess the genetic structure and mating-type frequency in a contemporary Pyricularia oryzae population, which caused widespread epidemics during the 2012/13 season in the Brazilian lowland subtropical region. Symptomatic leaves and panicles were sampled at flooded rice fields in the states of Rio Grande do Sul (RS, 34 fields) and Santa Catarina (SC, 21 fields). The polymorphism at ten simple sequence repeats (SSR or microsatellite) loci and the presence of MAT1-1 or MAT1-2 idiomorphs were assessed in a population comprised of 187 isolates. Only the MAT1-2 idiomorph was found and 162 genotypes were identified by the SSR analysis. A discriminant analysis of principal components (DAPC) of SSR data resolved four genetic groups, which were strongly associated with the cultivar of origin of the isolates. There was high level of genotypic diversity and moderate level of gene diversity regardless whether isolates were grouped in subpopulations based on geographic region, cultivar host or cultivar within region. While regional subpopulations were weakly differentiated, high genetic differentiation was found among subpopulations comprised of isolates from different cultivars. The data suggest that the rice blast pathogen population in southern Brazil is comprised of clonal lineages that are adapting to specific cultivar hosts. Farmers should avoid the use of susceptible cul... Mostrar Tudo |
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Palavras-Chave: |
Microsatelite. |
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Thesagro: |
Arroz; Brusone; Doença de planta; Fungo; Oryza sativa; Pyricularia oryzae. |
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Thesaurus Nal: |
Blast disease; Magnaporthe oryzae; Microsatellite repeats; Population structure. |
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Categoria do assunto: |
H Saúde e Patologia |
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Marc: |
LEADER 02566naa a2200313 a 4500
001 2052551
005 2020-04-27
008 2016 bl uuuu u00u1 u #d
024 7 $a10.1007/s40858-016-0101-9$2DOI
100 1 $aD'ÁVILA, L. S.
245 $aGenetic structure and mating type analysis of the Pyricularia oryzae population causing widespread epidemics in southern Brazil.$h[electronic resource]
260 $c2016
520 $aBlast is a major disease of rice in Brazil, the largest rice-producing country outside Asia. This study aimed to assess the genetic structure and mating-type frequency in a contemporary Pyricularia oryzae population, which caused widespread epidemics during the 2012/13 season in the Brazilian lowland subtropical region. Symptomatic leaves and panicles were sampled at flooded rice fields in the states of Rio Grande do Sul (RS, 34 fields) and Santa Catarina (SC, 21 fields). The polymorphism at ten simple sequence repeats (SSR or microsatellite) loci and the presence of MAT1-1 or MAT1-2 idiomorphs were assessed in a population comprised of 187 isolates. Only the MAT1-2 idiomorph was found and 162 genotypes were identified by the SSR analysis. A discriminant analysis of principal components (DAPC) of SSR data resolved four genetic groups, which were strongly associated with the cultivar of origin of the isolates. There was high level of genotypic diversity and moderate level of gene diversity regardless whether isolates were grouped in subpopulations based on geographic region, cultivar host or cultivar within region. While regional subpopulations were weakly differentiated, high genetic differentiation was found among subpopulations comprised of isolates from different cultivars. The data suggest that the rice blast pathogen population in southern Brazil is comprised of clonal lineages that are adapting to specific cultivar hosts. Farmers should avoid the use of susceptible cultivars over large areas and breeders should focus at enlarging the genetic basis of new cultivars.
650 $aBlast disease
650 $aMagnaporthe oryzae
650 $aMicrosatellite repeats
650 $aPopulation structure
650 $aArroz
650 $aBrusone
650 $aDoença de planta
650 $aFungo
650 $aOryza sativa
650 $aPyricularia oryzae
653 $aMicrosatelite
700 1 $aLEHNER, M. S.
700 1 $aFILIPPI, M. C. C.
700 1 $aSCHEUERMANN, K. K.
700 1 $aDEL PONTE, E. M.
773 $tTropical Plant Pathology, Brasília, DF$gv. 41, n. 6, p. 297-305, Oct. 2016.
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Esconder MarcMostrar Marc Completo |
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Registro original: |
Embrapa Arroz e Feijão (CNPAF) |
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Biblioteca |
ID |
Origem |
Tipo/Formato |
Classificação |
Cutter |
Registro |
Volume |
Status |
URL |
Voltar
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Registro Completo
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Biblioteca(s): |
Embrapa Agroenergia; Embrapa Meio-Norte. |
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Data corrente: |
03/08/2022 |
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Data da última atualização: |
08/08/2022 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
BRAGA, Í. de O.; SILVA, T. L. C. da; SILVA, V. N. B.; RODRIGUES NETO, J. C.; RIBEIRO, J. A. de A.; ABDELNUR, P. V.; SOUSA, C. A. F. de; SOUZA JUNIOR, M. T. |
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Afiliação: |
ÍTALO DE OLIVEIRA BRAGA, UFLA; THALLITON LUIZ CARVALHO DA SILVA, UFLA; VIVIANNY NAYSE BELO SILVA, UFLA; JORGE CANDIDO RODRIGUES NETO, UFG; JOSE ANTONIO DE AQUINO RIBEIRO, CNPAE; PATRICIA VERARDI ABDELNUR, CNPAE; CARLOS ANTONIO FERREIRA DE SOUSA, CPAMN; MANOEL TEIXEIRA SOUZA JUNIOR, CNPAE. |
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Título: |
Deep untargeted metabolomics analysis to further characterize the adaptation response of Gliricidia sepium (Jacq.) Walp. to very high salinity stress. |
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Ano de publicação: |
2022 |
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Fonte/Imprenta: |
Frontiers in Plant Science, v. 13, Art. 869105, May, 2022. |
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Idioma: |
Inglês |
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Conteúdo: |
The multipurpose tree Gliricidia sepium (Jacq.) Walp. adapts to a very high level of salt stress (≥20 dS m-1) and resumes the production of new leaves around 2 weeks after losing all leaves due to abrupt salinity stress. The integration of metabolome and transcriptome profiles from gliricidia leaves points to a central role of the phenylpropanoid biosynthesis pathway in the short-term response to salinity stress. In this study, a deeper untargeted metabolomics analysis of the leaves and roots of young gliricidia plants was conducted to characterize the mechanism(s) behind this adaptation response. The polar and lipidic fractions from leaf and root samples were extracted and analyzed on a UHPLC.ESI.Q-TOF.HRMS system. |
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Palavras-Chave: |
Espectrometria de massa de alta resolução; Estresse abiótico; Quimiometria; Tolerância ao sal. |
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Thesaurus NAL: |
Chemometrics; Phenylpropanoids; Phytosterols. |
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Categoria do assunto: |
X Pesquisa, Tecnologia e Engenharia |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1145202/1/DeepUntargetedMetabolomicsAnalysisFurtherCharacterizeFPSMay2022.pdf
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Marc: |
LEADER 01684naa a2200289 a 4500
001 2145310
005 2022-08-08
008 2022 bl uuuu u00u1 u #d
100 1 $aBRAGA, Í. de O.
245 $aDeep untargeted metabolomics analysis to further characterize the adaptation response of Gliricidia sepium (Jacq.) Walp. to very high salinity stress.$h[electronic resource]
260 $c2022
520 $aThe multipurpose tree Gliricidia sepium (Jacq.) Walp. adapts to a very high level of salt stress (≥20 dS m-1) and resumes the production of new leaves around 2 weeks after losing all leaves due to abrupt salinity stress. The integration of metabolome and transcriptome profiles from gliricidia leaves points to a central role of the phenylpropanoid biosynthesis pathway in the short-term response to salinity stress. In this study, a deeper untargeted metabolomics analysis of the leaves and roots of young gliricidia plants was conducted to characterize the mechanism(s) behind this adaptation response. The polar and lipidic fractions from leaf and root samples were extracted and analyzed on a UHPLC.ESI.Q-TOF.HRMS system.
650 $aChemometrics
650 $aPhenylpropanoids
650 $aPhytosterols
653 $aEspectrometria de massa de alta resolução
653 $aEstresse abiótico
653 $aQuimiometria
653 $aTolerância ao sal
700 1 $aSILVA, T. L. C. da
700 1 $aSILVA, V. N. B.
700 1 $aRODRIGUES NETO, J. C.
700 1 $aRIBEIRO, J. A. de A.
700 1 $aABDELNUR, P. V.
700 1 $aSOUSA, C. A. F. de
700 1 $aSOUZA JUNIOR, M. T.
773 $tFrontiers in Plant Science$gv. 13, Art. 869105, May, 2022.
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Embrapa Agroenergia (CNPAE) |
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