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Registro Completo |
Biblioteca(s): |
Embrapa Agricultura Digital; Embrapa Amazônia Oriental; Embrapa Recursos Genéticos e Biotecnologia. |
Data corrente: |
13/06/2022 |
Data da última atualização: |
13/06/2022 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Autoria: |
SALIM, J. A.; SARAIVA, A. M.; ZERMOGLIO, P. F.; AGOSTINI, K.; WOLOWSKI, M.; DRUCKER, D. P.; SOARES, F. M.; BERGAMO, P. J.; VARASSIN, I. G.; FREITAS, L.; MAUES, M. M.; RECH, A. R.; VEIGA, A. K.; ACOSTA, A. L.; ARAUJO, A. C.; NOGUEIRA, A.; BLOCHTEIN, B.; FREITAS, B. M.; ALBERTINI, B. C.; MAIA-SILVA, C.; NUNES, C. E. P.; PIRES, C. S. S.; SANTOS, C. F. dos; QUEIROZ, E. P.; CARTOLANO, E. A.; OLIVEIRA, F. F. de; AMORIM, F. W.; FONTÚRBEL, F. E.; SILVA, G. V. da; CONSOLARO, H.; ALVES-DOS-SANTOS, I.; MACHADO, I. C.; SILVA, J. S.; ALEIXO, K. P.; CARVALHEIRO, L. G.; ROCCA, M. A.; PINHEIRO, M.; HRNCIR, M.; STREHER, N. S.; FERREIRA, P. A.; ALBUQUERQUE, P. M. C. de; MARUYAMA, P. K.; BORGES, R. C.; GIANNINI, T. C.; BRITO, V. L. G. |
Afiliação: |
JOSÉ A. SALIM, USP; ANTONIO M. SARAIVA, USP; PAULA F. ZERMOGLIO, UNIVERSIDAD DE BUENOS AIRES; KAYNA AGOSTINI, UFSCAR; MARINA WOLOWSKI, UNIFAL; DEBORA PIGNATARI DRUCKER, CNPTIA; FILIPI M. SOARES, USP; PEDRO J. BERGAMO, JARDIM BOTÂNICO DO RIO DE JANEIRO; ISABELA G. VARASSIN, UFPR; LEANDRO FREITAS, JARDIM BOTÂNICO DO RIO DE JANEIRO; MARCIA MOTTA MAUES, CPATU; ANDRÉ R. RECH, UNIVERSIDADE FEDERAL DOS VALES DO JEQUITINHONHA E MUCURI, DIAMANTINA; ALLAN K. VEIGA, USP; ANDRE L. ACOSTA, INSTITUTO TECNOLÓGICO VALE, BELÉM; ANDRÉA C. ARAUJO, UFMS; ANSELMO NOGUEIRA, UFABC; BETINA BLOCHTEIN, PUCRS; BRENO M. FREITAS, UFC; BRUNO C. ALBERTINI, USP; CAMILA MAIA-SILVA, UNIVERSIDADE FEDERAL RURAL DO SEMI-ÁRIDO; CARLOS E. P. NUNES, UNIVERSITY OF STIRLING; CARMEN SILVIA SOARES PIRES, Cenargen; CHARLES F. DOS SANTOS, PUCRS; ELISA P. QUEIROZ, USP; ETIENNE A. CARTOLANO, USP; FAVÍZIA F. DE OLIVEIRA, UFBA; FELIPE W. AMORIM, UNESP; FRANCISCO E. FONTÚRBEL, PONTIFICIA UNIVERSIDAD CATÓLICA DE VALPARAÍSO, CHILE; GLEYCON V. DA SILVA, INPA; HÉLDER CONSOLARO, UNIVERSIDADE FEDERAL DE CATALÃO; ISABEL ALVES-DOS-SANTOS, USP; ISABEL C. MACHADO, UFPE; JULIANA S. SILVA, INSTITUTO FEDERAL DE EDUCAÇÃO CIÊNCIA E TECNOLOGIA DE MATO GROSSO; KÁTIA P. ALEIXO, ASSOCIAÇÃO BRASILEIRA DE ESTUDOS DAS ABELHAS; LUÍSA G. CARVALHEIRO, UFG, UNIVERSITY OF LISBOA; MÁRCIA A. ROCCA, UFS; MARDIORE PINHEIRO, UNIVERSIDADE FEDERAL DA FRONTEIRA SUL; MICHAEL HRNCIR, USP; NATHÁLIA S. STREHER, UNIVERSITY OF PITTSBURGH; PATRICIA A. FERREIRA, UFSCAR; PATRICIA M. C. DE ALBUQUERQUE, UFMA; PIETRO K. MARUYAMA, UFMG; RAFAEL C. BORGES, INSTITUTO TECNOLÓGICO VALE, BELÉM; TEREZA C. GIANNINI, INSTITUTO TECNOLÓGICO VALE, BELÉM; VINÍCIUS L. G. BRITO, UFU. |
Título: |
Data standardization of plant-pollinator interactions. |
Ano de publicação: |
2022 |
Fonte/Imprenta: |
GigaScience, v. 11, p. 1-15, 2022. |
DOI: |
https://doi.org/10.1093/gigascience/giac043 |
Idioma: |
Inglês |
Conteúdo: |
Abstract. Background: Animal pollination is an important ecosystem function and service, ensuring both the integrity of natural systems and human well-being. Although many knowledge shortfalls remain, some high-quality data sets on biological interactions are now available. The development and adoption of standards for biodiversity data and metadata has promoted great advances in biological data sharing and aggregation, supporting large-scale studies and science-based public policies. However, these standards are currently not suitable to fully support interaction data sharing. Results: Here we present a vocabulary of terms and a data model for sharing plant-pollinator interactions data based on the Darwin Core standard. The vocabulary introduces 48 new terms targeting several aspects of plant-pollinator interactions and can be used to capture information from different approaches and scales. Additionally, we provide solutions for data serialization using RDF, XML, and DwC-Archives and recommendations of existing controlled vocabularies for some of the terms. Our contribution supports open access to standardized data on plant-pollinator interactions. Conclusions: The adoption of the vocabulary would facilitate data sharing to support studies ranging from the spatial and temporal distribution of interactions to the taxonomic, phenological, functional, and phylogenetic aspects of plant-pollinator interactions. We expect to fill data and knowledge gaps, thus further enabling scientific research on the ecology and evolution of plant-pollinator communities, biodiversity conservation, ecosystem services, and the development of public policies. The proposed data model is flexible and can be adapted for sharing other types of interactions data by developing discipline-specific vocabularies of terms. MenosAbstract. Background: Animal pollination is an important ecosystem function and service, ensuring both the integrity of natural systems and human well-being. Although many knowledge shortfalls remain, some high-quality data sets on biological interactions are now available. The development and adoption of standards for biodiversity data and metadata has promoted great advances in biological data sharing and aggregation, supporting large-scale studies and science-based public policies. However, these standards are currently not suitable to fully support interaction data sharing. Results: Here we present a vocabulary of terms and a data model for sharing plant-pollinator interactions data based on the Darwin Core standard. The vocabulary introduces 48 new terms targeting several aspects of plant-pollinator interactions and can be used to capture information from different approaches and scales. Additionally, we provide solutions for data serialization using RDF, XML, and DwC-Archives and recommendations of existing controlled vocabularies for some of the terms. Our contribution supports open access to standardized data on plant-pollinator interactions. Conclusions: The adoption of the vocabulary would facilitate data sharing to support studies ranging from the spatial and temporal distribution of interactions to the taxonomic, phenological, functional, and phylogenetic aspects of plant-pollinator interactions. We expect to fill data and knowledge gaps, thus further enabling sc... Mostrar Tudo |
Palavras-Chave: |
Biodiversity informatics; Biodiversity information; Darwin Core; Informação sobre biodiversidade; Informática para biodiversidade; Interação planta-polinizador; Padronização de dados; Polinizador; Pollinator; Termos de vocabulário; Vocabulary of terms. |
Thesagro: |
Biodiversidade; Polinização. |
Thesaurus Nal: |
Pollination. |
Categoria do assunto: |
-- |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1143956/1/AP-Data-standardization-2022.pdf
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Marc: |
LEADER 04110naa a2200829 a 4500 001 2143956 005 2022-06-13 008 2022 bl uuuu u00u1 u #d 024 7 $ahttps://doi.org/10.1093/gigascience/giac043$2DOI 100 1 $aSALIM, J. A. 245 $aData standardization of plant-pollinator interactions.$h[electronic resource] 260 $c2022 520 $aAbstract. Background: Animal pollination is an important ecosystem function and service, ensuring both the integrity of natural systems and human well-being. Although many knowledge shortfalls remain, some high-quality data sets on biological interactions are now available. The development and adoption of standards for biodiversity data and metadata has promoted great advances in biological data sharing and aggregation, supporting large-scale studies and science-based public policies. However, these standards are currently not suitable to fully support interaction data sharing. Results: Here we present a vocabulary of terms and a data model for sharing plant-pollinator interactions data based on the Darwin Core standard. The vocabulary introduces 48 new terms targeting several aspects of plant-pollinator interactions and can be used to capture information from different approaches and scales. Additionally, we provide solutions for data serialization using RDF, XML, and DwC-Archives and recommendations of existing controlled vocabularies for some of the terms. Our contribution supports open access to standardized data on plant-pollinator interactions. Conclusions: The adoption of the vocabulary would facilitate data sharing to support studies ranging from the spatial and temporal distribution of interactions to the taxonomic, phenological, functional, and phylogenetic aspects of plant-pollinator interactions. We expect to fill data and knowledge gaps, thus further enabling scientific research on the ecology and evolution of plant-pollinator communities, biodiversity conservation, ecosystem services, and the development of public policies. The proposed data model is flexible and can be adapted for sharing other types of interactions data by developing discipline-specific vocabularies of terms. 650 $aPollination 650 $aBiodiversidade 650 $aPolinização 653 $aBiodiversity informatics 653 $aBiodiversity information 653 $aDarwin Core 653 $aInformação sobre biodiversidade 653 $aInformática para biodiversidade 653 $aInteração planta-polinizador 653 $aPadronização de dados 653 $aPolinizador 653 $aPollinator 653 $aTermos de vocabulário 653 $aVocabulary of terms 700 1 $aSARAIVA, A. M. 700 1 $aZERMOGLIO, P. F. 700 1 $aAGOSTINI, K. 700 1 $aWOLOWSKI, M. 700 1 $aDRUCKER, D. P. 700 1 $aSOARES, F. M. 700 1 $aBERGAMO, P. J. 700 1 $aVARASSIN, I. G. 700 1 $aFREITAS, L. 700 1 $aMAUES, M. M. 700 1 $aRECH, A. R. 700 1 $aVEIGA, A. K. 700 1 $aACOSTA, A. L. 700 1 $aARAUJO, A. C. 700 1 $aNOGUEIRA, A. 700 1 $aBLOCHTEIN, B. 700 1 $aFREITAS, B. M. 700 1 $aALBERTINI, B. C. 700 1 $aMAIA-SILVA, C. 700 1 $aNUNES, C. E. P. 700 1 $aPIRES, C. S. S. 700 1 $aSANTOS, C. F. dos 700 1 $aQUEIROZ, E. P. 700 1 $aCARTOLANO, E. A. 700 1 $aOLIVEIRA, F. F. de 700 1 $aAMORIM, F. W. 700 1 $aFONTÚRBEL, F. E. 700 1 $aSILVA, G. V. da 700 1 $aCONSOLARO, H. 700 1 $aALVES-DOS-SANTOS, I. 700 1 $aMACHADO, I. C. 700 1 $aSILVA, J. S. 700 1 $aALEIXO, K. P. 700 1 $aCARVALHEIRO, L. G. 700 1 $aROCCA, M. A. 700 1 $aPINHEIRO, M. 700 1 $aHRNCIR, M. 700 1 $aSTREHER, N. S. 700 1 $aFERREIRA, P. A. 700 1 $aALBUQUERQUE, P. M. C. de 700 1 $aMARUYAMA, P. K. 700 1 $aBORGES, R. C. 700 1 $aGIANNINI, T. C. 700 1 $aBRITO, V. L. G. 773 $tGigaScience$gv. 11, p. 1-15, 2022.
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Registro original: |
Embrapa Agricultura Digital (CNPTIA) |
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Registro Completo
Biblioteca(s): |
Embrapa Milho e Sorgo. |
Data corrente: |
11/06/2010 |
Data da última atualização: |
04/06/2018 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Circulação/Nível: |
A - 1 |
Autoria: |
MAGALHAES, J. V. de. |
Afiliação: |
JURANDIR VIEIRA DE MAGALHAES, CNPMS. |
Título: |
How a microbial drug transporter became essential for crop cultivation on acid soils: aluminium tolerance conferred by the multidrug and toxic compound extrusion (MATE) family. |
Ano de publicação: |
2010 |
Fonte/Imprenta: |
Annals of Botany, London, v. 106, p. 199-203, 2010. |
DOI: |
10.1093/aob/mcq115 |
Idioma: |
Inglês |
Conteúdo: |
Background: Aluminium (Al) toxicity is a major agricultural constraint for crop cultivation on acid soils, which comprise a large portion of the world's arable land. One of the most widely accepted mechanisms of Al tolerance in plants is based on Al-activated organic acid release into the rhizosphere, with organic acids forming stable, non-toxic complexes with Al. This mechanism has recently been validated by the isolation of bona-fide Al-tolerance genes in crop species, which encode membrane transporters that mediate Al-activated organic acid release leading to Al exclusion from root apices. In crop species such as sorghum and barley, members in the multidrug and toxic compound extrusion (MATE) family underlie Al tolerance by a mechanism based on Al-activated citrate release. |
Palavras-Chave: |
Aluminium tolerance; Membrane transporters; Microbial; Multidrug and toxic compound extrusion; Regulation of gene expression. |
Thesagro: |
Mate. |
Thesaurus NAL: |
abiotic stress. |
Categoria do assunto: |
-- |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/35683/1/How-microbial.pdf
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Marc: |
LEADER 01560naa a2200217 a 4500 001 1854889 005 2018-06-04 008 2010 bl uuuu u00u1 u #d 024 7 $a10.1093/aob/mcq115$2DOI 100 1 $aMAGALHAES, J. V. de 245 $aHow a microbial drug transporter became essential for crop cultivation on acid soils$baluminium tolerance conferred by the multidrug and toxic compound extrusion (MATE) family.$h[electronic resource] 260 $c2010 520 $aBackground: Aluminium (Al) toxicity is a major agricultural constraint for crop cultivation on acid soils, which comprise a large portion of the world's arable land. One of the most widely accepted mechanisms of Al tolerance in plants is based on Al-activated organic acid release into the rhizosphere, with organic acids forming stable, non-toxic complexes with Al. This mechanism has recently been validated by the isolation of bona-fide Al-tolerance genes in crop species, which encode membrane transporters that mediate Al-activated organic acid release leading to Al exclusion from root apices. In crop species such as sorghum and barley, members in the multidrug and toxic compound extrusion (MATE) family underlie Al tolerance by a mechanism based on Al-activated citrate release. 650 $aabiotic stress 650 $aMate 653 $aAluminium tolerance 653 $aMembrane transporters 653 $aMicrobial 653 $aMultidrug and toxic compound extrusion 653 $aRegulation of gene expression 773 $tAnnals of Botany, London$gv. 106, p. 199-203, 2010.
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Embrapa Milho e Sorgo (CNPMS) |
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