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Registro Completo |
Biblioteca(s): |
Embrapa Pecuária Sul. |
Data corrente: |
06/06/2014 |
Data da última atualização: |
23/02/2015 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Autoria: |
SAVIAN, J. V.; BARTH NETO, A.; DAVID, D. B. de; BREMM, C.; SCHONS, R. M. T.; GENRO, T. C. M.; AMARAL, G. A. do; GERE, J.; McMANUS, C. M.; BAYER, C.; CARVALHO, P. C. de F. |
Afiliação: |
Jean Victor Savian, UFRGS; Armindo Barth Neto, UFRGS; Diego Bitencourt de David, FEPAGRO; Carolina Bremm, FEPAGRO; Radael Marinho Três Schons, UFRGS; TERESA CRISTINA MORAES GENRO, CPPSUL; Glaucia Azevedo do Amaral, FEPAGRO; José Gere, National University of Central State of Buenos Aires; Concepta Margaret McManus, UFRGS; Cimélio Bayer, UFRGS; Paulo César de Faccio Carvalho, UFRGS. |
Título: |
Grazing intensity and stocking methods on animal production and methane emission by grazing sheep: implications for integrated crop-livestock system. |
Ano de publicação: |
2014 |
Fonte/Imprenta: |
Agriculture, Ecosystems & Environment, Amsterdam, v. 190, p. 112-119, June 2014. |
Idioma: |
Inglês |
Thesagro: |
Efeito estufa; Gas; Metano; Ovino. |
Categoria do assunto: |
-- |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/103286/1/SavianEtAl-2014.pdf
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Marc: |
LEADER 00861naa a2200277 a 4500 001 1987863 005 2015-02-23 008 2014 bl uuuu u00u1 u #d 100 1 $aSAVIAN, J. V. 245 $aGrazing intensity and stocking methods on animal production and methane emission by grazing sheep$bimplications for integrated crop-livestock system.$h[electronic resource] 260 $c2014 650 $aEfeito estufa 650 $aGas 650 $aMetano 650 $aOvino 700 1 $aBARTH NETO, A. 700 1 $aDAVID, D. B. de 700 1 $aBREMM, C. 700 1 $aSCHONS, R. M. T. 700 1 $aGENRO, T. C. M. 700 1 $aAMARAL, G. A. do 700 1 $aGERE, J. 700 1 $aMcMANUS, C. M. 700 1 $aBAYER, C. 700 1 $aCARVALHO, P. C. de F. 773 $tAgriculture, Ecosystems & Environment, Amsterdam$gv. 190, p. 112-119, June 2014.
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Registro original: |
Embrapa Pecuária Sul (CPPSUL) |
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| Acesso ao texto completo restrito à biblioteca da Embrapa Arroz e Feijão. Para informações adicionais entre em contato com cnpaf.biblioteca@embrapa.br. |
Registro Completo
Biblioteca(s): |
Embrapa Arroz e Feijão. |
Data corrente: |
01/09/2014 |
Data da última atualização: |
09/12/2014 |
Tipo da produção científica: |
Artigo em Periódico Indexado |
Circulação/Nível: |
A - 1 |
Autoria: |
MÜLLER, B. S. de F.; SAKAMOTO, T.; MENEZES, I. P. P. de; PRADO, G. S.; MARTINS, W. S.; BRONDANI, C.; BARROS, E. G. de; VIANELLO, R. P. |
Afiliação: |
BÁRBARA SALOMÃO DE FARIA MÜLLER, UFV; TETSU SAKAMOTO, UFMG; IVANDILSON PESSOA PINTO DE MENEZES, INSTITUTO FEDERAL GOIANO, Urutaí-GO; GUILHERME SOUZA PRADO, bolsista CNPAF; WELLINGTON SANTOS MARTINS, UFG; CLAUDIO BRONDANI, CNPAF; EVERALDO GONÇALVES DE BARROS, UNIVERSIDADE CATÓLICA DE BRASÍLIA; ROSANA PEREIRA VIANELLO, CNPAF. |
Título: |
Analysis of BAC-end sequences in common bean (Phaseolus vulgaris L.) towards the development and characterization of long motifs SSRs. |
Ano de publicação: |
2014 |
Fonte/Imprenta: |
Plant Molecular Biology, Dordrecht, v. 86, n. 4/5, p. 455-470, Nov. 2014. |
DOI: |
10.1007/s11103-014-0240-7 |
Idioma: |
Inglês |
Conteúdo: |
The increasing volume of genomic data on the Phaseolus vulgaris species have contributed to its importance as a model genetic species and positively affected the investigation of other legumes of scientific and economic value. To expand and gain a more in-depth knowledge of the common bean genome, the ends of a number of bacterial artificial chromosome (BAC) were sequenced, annotated and the presence of repetitive sequences was determined. In total, 52,270 BESs (BAC-end sequences), equivalent to 32 Mbp (~6 %) of the genome, were processed. In total, 3,789 BES-SSRs were identified, with a distribution of one SSR (simple sequence repeat) per 8.36 kbp and 2,000 were suitable for the development of SSRs, of which 194 were evaluated in low-resolution screening. From 40 BES-SSRs based on long motifs SSRs (≥trinucleotides) analyzed in high-resolution genotyping, 34 showed an equally good amplification for the Andean and for the Mesoamerican genepools, exhibiting an average gene diversity (H E) of 0.490 and 5.59 alleles/locus, of which six classified as Class I showed a H E ≥ 0.7. The PCoA and structure analysis allowed to discriminate the gene pools (K = 2, FST = 0.733). From the 52,270 BESs, 2 % corresponded to transcription factors and 3 % to transposable elements. Putative functions for 24,321 BESs were identified and for 19,363 were assigned functional categories (gene ontology). This study identified highly polymorphic BES-SSRs containing tri- to hexanucleotides motifs and bringing together relevant genetic characteristics useful for breeding programs. Additionally, the BESs were incorporated into the international genome-sequencing project for the common bean. MenosThe increasing volume of genomic data on the Phaseolus vulgaris species have contributed to its importance as a model genetic species and positively affected the investigation of other legumes of scientific and economic value. To expand and gain a more in-depth knowledge of the common bean genome, the ends of a number of bacterial artificial chromosome (BAC) were sequenced, annotated and the presence of repetitive sequences was determined. In total, 52,270 BESs (BAC-end sequences), equivalent to 32 Mbp (~6 %) of the genome, were processed. In total, 3,789 BES-SSRs were identified, with a distribution of one SSR (simple sequence repeat) per 8.36 kbp and 2,000 were suitable for the development of SSRs, of which 194 were evaluated in low-resolution screening. From 40 BES-SSRs based on long motifs SSRs (≥trinucleotides) analyzed in high-resolution genotyping, 34 showed an equally good amplification for the Andean and for the Mesoamerican genepools, exhibiting an average gene diversity (H E) of 0.490 and 5.59 alleles/locus, of which six classified as Class I showed a H E ≥ 0.7. The PCoA and structure analysis allowed to discriminate the gene pools (K = 2, FST = 0.733). From the 52,270 BESs, 2 % corresponded to transcription factors and 3 % to transposable elements. Putative functions for 24,321 BESs were identified and for 19,363 were assigned functional categories (gene ontology). This study identified highly polymorphic BES-SSRs containing tri- to hexanucleotides mo... Mostrar Tudo |
Thesagro: |
Feijão; Genética molecular; Phaseolus vulgaris. |
Thesaurus NAL: |
Beans; Fabaceae; Genomics; Microsatellite repeats; Molecular genetics; Transcription factors; Transposons. |
Categoria do assunto: |
X Pesquisa, Tecnologia e Engenharia |
Marc: |
LEADER 02734naa a2200337 a 4500 001 1993888 005 2014-12-09 008 2014 bl uuuu u00u1 u #d 024 7 $a10.1007/s11103-014-0240-7$2DOI 100 1 $aMÜLLER, B. S. de F. 245 $aAnalysis of BAC-end sequences in common bean (Phaseolus vulgaris L.) towards the development and characterization of long motifs SSRs.$h[electronic resource] 260 $c2014 520 $aThe increasing volume of genomic data on the Phaseolus vulgaris species have contributed to its importance as a model genetic species and positively affected the investigation of other legumes of scientific and economic value. To expand and gain a more in-depth knowledge of the common bean genome, the ends of a number of bacterial artificial chromosome (BAC) were sequenced, annotated and the presence of repetitive sequences was determined. In total, 52,270 BESs (BAC-end sequences), equivalent to 32 Mbp (~6 %) of the genome, were processed. In total, 3,789 BES-SSRs were identified, with a distribution of one SSR (simple sequence repeat) per 8.36 kbp and 2,000 were suitable for the development of SSRs, of which 194 were evaluated in low-resolution screening. From 40 BES-SSRs based on long motifs SSRs (≥trinucleotides) analyzed in high-resolution genotyping, 34 showed an equally good amplification for the Andean and for the Mesoamerican genepools, exhibiting an average gene diversity (H E) of 0.490 and 5.59 alleles/locus, of which six classified as Class I showed a H E ≥ 0.7. The PCoA and structure analysis allowed to discriminate the gene pools (K = 2, FST = 0.733). From the 52,270 BESs, 2 % corresponded to transcription factors and 3 % to transposable elements. Putative functions for 24,321 BESs were identified and for 19,363 were assigned functional categories (gene ontology). This study identified highly polymorphic BES-SSRs containing tri- to hexanucleotides motifs and bringing together relevant genetic characteristics useful for breeding programs. Additionally, the BESs were incorporated into the international genome-sequencing project for the common bean. 650 $aBeans 650 $aFabaceae 650 $aGenomics 650 $aMicrosatellite repeats 650 $aMolecular genetics 650 $aTranscription factors 650 $aTransposons 650 $aFeijão 650 $aGenética molecular 650 $aPhaseolus vulgaris 700 1 $aSAKAMOTO, T. 700 1 $aMENEZES, I. P. P. de 700 1 $aPRADO, G. S. 700 1 $aMARTINS, W. S. 700 1 $aBRONDANI, C. 700 1 $aBARROS, E. G. de 700 1 $aVIANELLO, R. P. 773 $tPlant Molecular Biology, Dordrecht$gv. 86, n. 4/5, p. 455-470, Nov. 2014.
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