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| Registros recuperados : 173 | |
| 101. |  | BARROS, F. A. L.; DIAS, J. A. R.; ABE, H. A.; COSTA JUNIOR, K. S.; SOUSA, N. da C.; CORDEIRO, C. A. M.; FUJIMOTO, R. Y. Enrichment of Artemia sp. with autochthonous probiotics at different levels in larviculture of piauçu Megaleporinus macrocephalus. Boletim do Instituto de Pesca, v. 49, e800, 2023.| Biblioteca(s): Embrapa Tabuleiros Costeiros. |
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| 102. | | SILVA, T. L.; LACERDA, U. V.; MATTA, S. L. P. da; QUEIROZ, V. A. V.; STRINGHETA, P. C.; MARTINO, H. S. D.; BARROS, F. A. de. Evaluation of the efficacy of toasted white and tannin sorghum flours to improve oxidative stress and lipid profile in vivo. Journal of Food Science, v. 85, n. 7, p. 2236-2244, 2020.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 103. | | BARROS, F. R.; ROCHA, M. M.; NUNES, J. A. R.; FREIRE FILHO, F. R.; DAMASCENO-SILVA, K. J. D.; SOBRAL, P. V. C.; RODRIGUES, E. V. Estudo comparativo entre progênies F4 de feijão-caupi de inflorescência simples e composta. In: CONGRESSO NACIONAL DE FEIJÃO-CAUPI, 2., 2009, Belém, PA. Da agricultura de subsistência ao agronegócio: anais. Belém, PA: Embrapa Amazônia Oriental, 2009. p. 568-572. 1 CD-ROM. Autoria: DAMASCENO-SILVA, K. J. [i.e. SILVA, K. J. D. e]| Biblioteca(s): Embrapa Meio-Norte. |
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| 104. | | MARTINEZ, O. D. M.; TOLEDO, R. C. L.; QUEIROZ, V. A. V.; PIROZI, M. R.; MARTINO, H. S. D.; BARROS, F. A. R. de. Mixed sorghum and quinoa flour improves protein quality and increases antioxidant capacity in vivo. LWT. Food, Science and Technology, v. 129, article 109597, 2020.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 105. | | BERNARDI, A. C. de C.; WERNECK, C. G.; HAIM, P. G.; MONTE, M. B. de M.; BARROS, F. de S.; VERRUMA-BERNARDI, M. R. Nitrogen, Potassium and Nitrate concentrations of lettuce grown in a substrate with KNO3-enriched zeolite. Communications in Soil Science and Plant Analysis, v. 46, n. 7, 2015. p. 11-15.| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| 106. | | COSER, T. R.; RAMOS, M. L. G.; FIGUEIREDO, C. C. de; URQUIAGA, S.; CARVALHO, A. M. de; BARROS, F. V.; MENDONÇA, M. T. Nitrogen uptake efficiency of maize in monoculture and intercropped with Brachiaria humidicola and Panicum maximum in a dystrophic red-yellow latosol of the Brazilian Cerrado. Crop & Pasture Science, v. 67, n. 1, p. 47-54, 2015.| Biblioteca(s): Embrapa Agrobiologia. |
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| 107. | | BARBOSA, M. P.; ROGOLON, T. C. B.; BORGES, L. L. R.; QUEIROZ, V. A. V.; STRINGHETA, P. C.; BARROS, F. A. R. de. Effect of light, food additives and heat on the stability of sorghum 3-deoxyanthocyanins in model beverages. International Journal of Food Science and Technology, v. 56, p. 4746-4755, 2021.| Biblioteca(s): Embrapa Milho e Sorgo. |
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| 110. | | B. FILHO, M.; SILVA, M. G. da; POLIDORO, J. C.; LUNA, F. J.; MONTE, M. B. M.; MIKLÓS, A.; SOUZA-BARROS, F.; VARGAS, H. Detection of ammonia released from zeolite by the quantum cascade laser based photoacoustic set-up. The European Physical Journal Special Topics, v. 153, p. 547-550, 2008.| Biblioteca(s): Embrapa Solos. |
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| 111. | | GOGONE, I. C. V. P.; FERREIRA, G. H.; GAVA, D.; SCHAEFER, R.; PAULA-LOPES, F. F. de; ROCHA, R. de A.; BARROS, F. R. O. de. Applicability of Raman spectroscopy on porcine parvovirus and porcine circovirus type 2 detection. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, v. 249, n. 119336, 2021.| Biblioteca(s): Embrapa Suínos e Aves. |
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| 112. | | RITER, H. G.; LUNA, F. J.; SILVA, M. G.; BAPTISTA FILHO, M.; VARGAS, H.; MONTE, M. B. M.; POLIDORO, J. C.; SOUZA-BARROS, F. Caracterização físico-química de uma zeólita natural brasileira visando o controle de nitrogênio disponível para plantas sob adubação. In: REUNIÃO ANUAL DA SOCIEDADE BRASILEIRA DE QUÍMICA, 32., 2009, Fortaleza. Químicos para uma potência emergente: resumos. São Paulo: Sociedade Brasileira de Química, 2009. 1 CD-ROM.| Biblioteca(s): Embrapa Solos. |
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| 113. | | ABE, H. A.; REIS, R. G. A.; BARROS, F. A. L.; PAIXAO, P. E. G.; MENESES, J. O.; SOUZA, J. C. N. de; FUJIMOTO, R. Y. Optimal management improves Flowerhorn fish larviculture. Aquaculture Research, v. 52, p. 2353-2358, 2021.| Biblioteca(s): Embrapa Tabuleiros Costeiros. |
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| 115. | | TAVARES, R. L. M.; OLIVEIRA, S. R. de M.; BARROS, F. M. M. de; FARHATE, C. V. V.; SOUZA, Z. M. de; LA SCALA JUNIOR, N. Prediction of soil CO2 flux in sugarcane management systems using the Random Forest approach. Scientia Agricola, Piracicaba, v. 74, n. 4, p. 281-287, July/Aug. 2018.| Biblioteca(s): Embrapa Agricultura Digital. |
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| 116. | | BARROS, F. R.; ANUNCIAÇÃO FILHO, C. J. da; ROCHA, M. de M.; NUNES, J. A. R.; SILVA, K. J. D. e; FREIRE FILHO, F. R.; RIBEIRO, V. Q. Potencial genético de progênies de feijão-caupi segregantes quanto ao tipo de inflorescência. Pesquisa Agropecuária Brasileira, Brasília, v. 46, n. 2, p. 182-189, fev. 2011.| Biblioteca(s): Embrapa Algodão; Embrapa Hortaliças; Embrapa Meio-Norte; Embrapa Unidades Centrais. |
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| 117. | | BERNARDI, A. C. de C.; MONTE, M.; PAIVA, P.; WERNECK, C. G; HAIM, P. G.; POLIDORO, J. C.; SOUZA-BARROS, F. de. Potencial de uso de zeólitas na agropecuária. In: CONGRESSO BRASILEIRO ROCHAGEM, 2009, Brasília. Anais... Brasília: Petrobras: Embrapa: MCT: MME, 2009| Biblioteca(s): Embrapa Pecuária Sudeste. |
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| Registros recuperados : 173 | |
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Registro Completo
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Biblioteca(s): |
Embrapa Café; Embrapa Recursos Genéticos e Biotecnologia. |
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Data corrente: |
18/02/2011 |
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Data da última atualização: |
28/02/2023 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
VIDAL, R. O.; MONDEGO, J. M. C.; POT, D.; AMBRÓSIO, A. B.; ANDRADE, A. C.; PEREIRA, L. F. P.; COLOMBO, C. A.; VIEIRA, L. G. E.; CARAZZOLLE, M. F.; PEREIRA, G. A. G. |
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Afiliação: |
RAMON OLIVEIRA VIDAL, UNICAMP/Instituto de Biologia; JORGE MAURÍCIO COSTA MONDEGO, Instituto Agronômico de Campinas; DAVID POT, Centre de Coopération Internationale en Recherche Agronomique pour le Développement; ALINNE BATISTA AMBRÓSIO, UNICAMP/Instituto de Biologia; ALAN CARVALHO ANDRADE, CENARGEN; LUIZ FILIPE PROTASIO PEREIRA, SAPC; CARLOS AUGUSTO COLOMBO, Instituto Agronômico de Campinas; LUIZ GONZAGA ESTEVES VIEIRA, Instituo Agronômico do Pará; MARCELO FALSARELLA CARAZZOLLE, UNICAMP/Instituto de Biologia; GONÇALO AMARANTE GUIMARÃES PEREIRA, UNICAMP/Instituto de Biologia. |
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Título: |
A high-throughput data mining of single nucleotide polymorphisms in Coffea species expresed sequence tags suggests differential homeologous gene expression in the allotetrapoloid Coffea arabica. |
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Ano de publicação: |
2010 |
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Fonte/Imprenta: |
PLANT PHYSIOLOGY, v. 154, p. 1053-1066. 2010. |
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Páginas: |
1053-1066 |
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Idioma: |
Inglês |
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Conteúdo: |
Polyploidization constitutes a common mode of evolution in flowering plants. This event provides the raw material for the divergence of function in homeologous genes, leading to phenotypic novelty that can contribute to the success of polyploids in nature or their selection for use in agriculture. Mounting evidence underlined the existence of homeologous expression biases in polyploid genomes; however, strategies to analyze such transcriptome regulation remained scarce. Important factors regarding homeologous expression biases remain to be explored, such as whether this phenomenon influences specific genes, how paralogs are affected by genome doubling, and what is the importance of the variability of homeologous expression bias to genotype differences. This study reports the expressed sequence tag assembly of the allopolyploid Coffea arabica and one of its direct ancestors, Coffea canephora. The assembly was used for the discovery of single nucleotide polymorphisms through the identification of high-quality discrepancies in overlapped expressed sequence tags and for gene expression information indirectly estimated by the transcript redundancy. Sequence diversity profiles were evaluated within C. arabica (Ca) and C. canephora (Cc) and used to deduce the transcript contribution of the Coffea eugenioides (Ce) ancestor. The assignment of the C. arabica haplotypes to the C. canephora (CaCc) or C. eugenioides (CaCe) ancestral genomes allowed us to analyze gene expression contributions of each subgenome in C. arabica. In silico data were validated by the quantitative polymerase chain reaction and allele-specific combination TaqMAMA-based method. The presence of differential expression of C. arabica homeologous genes and its implications in coffee gene expression, ontology, and physiology are discussed. MenosPolyploidization constitutes a common mode of evolution in flowering plants. This event provides the raw material for the divergence of function in homeologous genes, leading to phenotypic novelty that can contribute to the success of polyploids in nature or their selection for use in agriculture. Mounting evidence underlined the existence of homeologous expression biases in polyploid genomes; however, strategies to analyze such transcriptome regulation remained scarce. Important factors regarding homeologous expression biases remain to be explored, such as whether this phenomenon influences specific genes, how paralogs are affected by genome doubling, and what is the importance of the variability of homeologous expression bias to genotype differences. This study reports the expressed sequence tag assembly of the allopolyploid Coffea arabica and one of its direct ancestors, Coffea canephora. The assembly was used for the discovery of single nucleotide polymorphisms through the identification of high-quality discrepancies in overlapped expressed sequence tags and for gene expression information indirectly estimated by the transcript redundancy. Sequence diversity profiles were evaluated within C. arabica (Ca) and C. canephora (Cc) and used to deduce the transcript contribution of the Coffea eugenioides (Ce) ancestor. The assignment of the C. arabica haplotypes to the C. canephora (CaCc) or C. eugenioides (CaCe) ancestral genomes allowed us to analyze gene expression contribut... Mostrar Tudo |
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Thesagro: |
Coffea Arábica. |
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Categoria do assunto: |
-- |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/29342/1/A-high-throughput.pdf
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Marc: |
LEADER 02657naa a2200253 a 4500
001 1917245
005 2023-02-28
008 2010 bl uuuu u00u1 u #d
100 1 $aVIDAL, R. O.
245 $aA high-throughput data mining of single nucleotide polymorphisms in Coffea species expresed sequence tags suggests differential homeologous gene expression in the allotetrapoloid Coffea arabica.$h[electronic resource]
260 $c2010
300 $a1053-1066
520 $aPolyploidization constitutes a common mode of evolution in flowering plants. This event provides the raw material for the divergence of function in homeologous genes, leading to phenotypic novelty that can contribute to the success of polyploids in nature or their selection for use in agriculture. Mounting evidence underlined the existence of homeologous expression biases in polyploid genomes; however, strategies to analyze such transcriptome regulation remained scarce. Important factors regarding homeologous expression biases remain to be explored, such as whether this phenomenon influences specific genes, how paralogs are affected by genome doubling, and what is the importance of the variability of homeologous expression bias to genotype differences. This study reports the expressed sequence tag assembly of the allopolyploid Coffea arabica and one of its direct ancestors, Coffea canephora. The assembly was used for the discovery of single nucleotide polymorphisms through the identification of high-quality discrepancies in overlapped expressed sequence tags and for gene expression information indirectly estimated by the transcript redundancy. Sequence diversity profiles were evaluated within C. arabica (Ca) and C. canephora (Cc) and used to deduce the transcript contribution of the Coffea eugenioides (Ce) ancestor. The assignment of the C. arabica haplotypes to the C. canephora (CaCc) or C. eugenioides (CaCe) ancestral genomes allowed us to analyze gene expression contributions of each subgenome in C. arabica. In silico data were validated by the quantitative polymerase chain reaction and allele-specific combination TaqMAMA-based method. The presence of differential expression of C. arabica homeologous genes and its implications in coffee gene expression, ontology, and physiology are discussed.
650 $aCoffea Arábica
700 1 $aMONDEGO, J. M. C.
700 1 $aPOT, D.
700 1 $aAMBRÓSIO, A. B.
700 1 $aANDRADE, A. C.
700 1 $aPEREIRA, L. F. P.
700 1 $aCOLOMBO, C. A.
700 1 $aVIEIRA, L. G. E.
700 1 $aCARAZZOLLE, M. F.
700 1 $aPEREIRA, G. A. G.
773 $tPLANT PHYSIOLOGY$gv. 154, p. 1053-1066. 2010.
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Embrapa Recursos Genéticos e Biotecnologia (CENARGEN) |
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