|
|
Registro Completo |
Biblioteca(s): |
Embrapa Cerrados. |
Data corrente: |
21/03/2016 |
Data da última atualização: |
06/04/2016 |
Tipo da produção científica: |
Artigo em Anais de Congresso |
Autoria: |
CARNEIRO, F. de A.; RÊGO, É. C. S.; AQUINO, S. O. de; COSTA, T. S.; LIMA, E. A. de; ROCHA, O. C.; RODRIGUES, G. C.; CARVALHO, M. A. de F.; MARRACCINI, P.; BARTHOLO, G. F.; GUERRA, A. F.; SILVA JUNIOR, O. B. da; GRATTAPAGLIA, D.; ANDRADE, A. C. |
Afiliação: |
FERNANDA DE ARAÚJO CARNEIRO, Ufla; ÉRICA CRISTINA SILVA RÊGO, Bolsista Consórcio Pesquisa Café; SINARA OLIVEIRA DE AQUINO, Ufla; TATIANA SANTOS COSTA, Ufla; EDRIANA ARAÚJO DE LIMA, UnB; OMAR CRUZ ROCHA, CPAC; GUSTAVO COSTA RODRIGUES, CNPTIA; MILENE ALVES DE FIGUEIREDO CARVALHO, SAPC; PIERRE MARRACCINI, Cirad; GABRIEL FERREIRA BARTHOLO, SAPC; ANTÔNIO FERNANDO GUERRA, SAPC; ORZENIL BONFIM DA SILVA JUNIOR, CENARGEN; DARIO GRATTAPAGLIA, CENARGEN; ALAN CARVALHO ANDRADE, CENARGEN. |
Título: |
Estrutura e diversidade genética de uma população de Coffea canephora conilon utilizando marcadores SNPs identificados por nextRAD. |
Ano de publicação: |
2015 |
Fonte/Imprenta: |
In: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 9., 2015, Curitiba. Consórcio pesquisa café: oportunidades e novos desafios: anais. Brasília, DF: Embrapa Café, 2015. |
Páginas: |
Não paginado. |
Idioma: |
Português |
Conteúdo: |
Este trabalho objetivou (i) avaliar e caracterizar, por meio da técnica de genotipagem nextRAD (Nextera-tagmented reductively-amplified DNA), a diversidade e a estrutura genética de indivíduos de C. canephora Conilon, pertencentes a uma população localizada em campo experimental da Embrapa Cerrados. |
Palavras-Chave: |
Diversidade genética; Genetic diversity; Genotipagem nextRAD. |
Thesagro: |
Coffea Canephora. |
Thesaurus Nal: |
Genetic variation; Genotyping; Single nucleotide polymorphism. |
Categoria do assunto: |
-- |
Marc: |
LEADER 01539naa a2200373 a 4500 001 2041506 005 2016-04-06 008 2015 bl --- 0-- u #d 100 1 $aCARNEIRO, F. de A. 245 $aEstrutura e diversidade genética de uma população de Coffea canephora conilon utilizando marcadores SNPs identificados por nextRAD. 260 $c2015 300 $aNão paginado. 520 $aEste trabalho objetivou (i) avaliar e caracterizar, por meio da técnica de genotipagem nextRAD (Nextera-tagmented reductively-amplified DNA), a diversidade e a estrutura genética de indivíduos de C. canephora Conilon, pertencentes a uma população localizada em campo experimental da Embrapa Cerrados. 650 $aGenetic variation 650 $aGenotyping 650 $aSingle nucleotide polymorphism 650 $aCoffea Canephora 653 $aDiversidade genética 653 $aGenetic diversity 653 $aGenotipagem nextRAD 700 1 $aRÊGO, É. C. S. 700 1 $aAQUINO, S. O. de 700 1 $aCOSTA, T. S. 700 1 $aLIMA, E. A. de 700 1 $aROCHA, O. C. 700 1 $aRODRIGUES, G. C. 700 1 $aCARVALHO, M. A. de F. 700 1 $aMARRACCINI, P. 700 1 $aBARTHOLO, G. F. 700 1 $aGUERRA, A. F. 700 1 $aSILVA JUNIOR, O. B. da 700 1 $aGRATTAPAGLIA, D. 700 1 $aANDRADE, A. C. 773 $tIn: SIMPÓSIO DE PESQUISA DOS CAFÉS DO BRASIL, 9., 2015, Curitiba. Consórcio pesquisa café: oportunidades e novos desafios: anais. Brasília, DF: Embrapa Café, 2015.
Download
Esconder MarcMostrar Marc Completo |
Registro original: |
Embrapa Cerrados (CPAC) |
|
Biblioteca |
ID |
Origem |
Tipo/Formato |
Classificação |
Cutter |
Registro |
Volume |
Status |
URL |
Voltar
|
|
Registro Completo
Biblioteca(s): |
Embrapa Meio Ambiente. |
Data corrente: |
03/01/2023 |
Data da última atualização: |
03/01/2023 |
Tipo da produção científica: |
Resumo em Anais de Congresso |
Autoria: |
ROGERIO, F.; BARONCELLI, R.; CUEVAS-FERNÁNDEZ, F. B.; BECERRA. S.; CROUCH, J.; BETTIOL, W.; AZCÁRATE-PERIL, M. A.; MALAPI-WIGHT, M.; ORTEGA, V.; BETRAN, J.; TENUTA, A.; DAMBOLENA, J. S.; ESKER, P. D.; REVILLA, P.; JACKSON-ZIEMS, T. A.; HILTBRUNNER, J.; MUNKVOLD, G.; BUHINICEK, I.; VICENTE-VILLARDÓN, J. L.; SUKNO, S. A.; THON, M. R. |
Afiliação: |
FLÁVIA ROGÉRIO, Instituto de Investigación en Agrobiotecnología (CIALE), Departamento de Microbiología y Genética, Universidad de Salamanca, Spain; RICARDO BARONCELLI, Department of Agricultural and Food Sciences (DISTAL), University of Bologna, Italy; FRANCISCO BORJA CUEVAS-FERNÁNDEZ, Instituto de Investigación en Agrobiotecnología (CIALE), Departamento de Microbiología y Genética, Universidad de Salamanca, Spain; SIOLY BECERRA, Instituto de Investigación en Agrobiotecnología (CIALE), Departamento de Microbiología y Genética, Universidad de Salamanca, Spain; JOANNE CROUCH, United States Department of Agriculture, Foreign Disease and Weed Science Unit, USA; WAGNER BETTIOL, CNPMA; M. ANDREA AZCÁRATE-PERIL, Center for Gastrointestinal Biology and Disease, Division of Gastroenterology and Hepatology, and UNC Microbiome Core, Department of Medicine, School of Medicine, University of North Carolina, USA; MARTHA MALAPI-WIGHT, USDA-Animal and Plant Health Inspection Services, Biotechnology Regulatory Services, USA; VERONIQUE ORTEGA, Syngenta Seeds La Grangette, France; JAVIER BETRAN, Bayer Crop Science/Monsanto SAS, France; ALBERT TENUTA, Ontario Ministry of Agriculture, Food, and Rural Affairs, University of Guelph-Ridgetown, Ridgetown, Ontario, Canada; JOSÉ S. DAMBOLENA, Facultad de Ciencias Exactas Físicas y Naturales, Universidad Nacional de Córdoba, IMBIV-CONICET-ICTA, Córdoba, Argentina; PAUL D. ESKER, Department of Plant Pathology and Environmental Microbiology, Pennsylvania State University, State College, United States; PEDRO REVILLA, Misión Biológica de Galicia, Spanish National Research Council (CSIC), Pontevedra, Spain; TAMRA A. JACKSON-ZIEMS, Department of Plant Pathology, University of Nebraska–Lincoln; JÜRG HILTBRUNNER, Federal Department of Economic Affairs, Zurich, Switzerland; GARY MUNKVOLD, Department of Plant Pathology and Microbiology, Iowa State University, Ames, IA; IVICA BUHINICEK, Bc Institute for Breeding and Production of Field Crops, Croatia; JOSÉ L. VICENTE-VILLARDÓN, Statistics Department University of Salamanca, Salamanca, Spain; SERENELLA A. SUKNO, Instituto de Investigación en Agrobiotecnología (CIALE), Departamento de Microbiología y Genética, Universidad de Salamanca, Spain; MICHAEL R. THON, Instituto de Investigación en Agrobiotecnología (CIALE), Departamento de Microbiología y Genética, Universidad de Salamanca, Spain. |
Título: |
Migration and genetic recombination shape the global population structure of Colletotrichum graminicola, the causal agent of maize anthracnose. |
Ano de publicação: |
2022 |
Fonte/Imprenta: |
In: CONGRESO DE LA SOCIEDADE ESPAÑOLA DE FITOPATOLOGIA, 20., 2022, València. [Libro de resúmenes...] València: Sociedad Española de Fitopatología, 2022. Póster 172. |
Páginas: |
p. 290. |
Idioma: |
Português |
Conteúdo: |
Maize anthracnose, caused by the ascomycete fungus Colletotrichum graminicola, is an important crop disease worldwide. Understanding the genetic diversity and mechanisms underlying genetic variation in pathogen populations is crucial to the development of effective control strategies. The genus Colletotrichum is largely recognized as asexual, but several species have been reported to have a sexual cycle. We employed a population genomics approach to investigate the genetic diversity and reproductive biology of C. graminicola isolates infecting maize. We sequenced 108 isolates of C. graminicola collected in 14 countries using restriction site-associated DNA sequencing (RAD-Seq) and whole-genome sequencing (WGS). Clustering analyses based on single-nucleotide polymorphisms showed populational differentiation at a global scale, with three genetic groups delimited by continental origin, corresponding to the isolates from South America, Europe, and North America, compatible with short-dispersal of the pathogen, and geographic subdivision. Intra and inter-continental migration was predicted between Europe and South America, likely associated with the movement of contaminated germplasm. Low clonality and evidence of genetic recombination were detected from the analysis of linkage disequilibrium and the pairwise homoplasy index (PHI) test for clonality. Although the sexual state of C. graminicola has only been reported in lab conditions, we showed strong evidence that genetic recombination have a great impact on C. graminicola population structure, in contrast to the traditional view of C. graminicola being mainly clonal. MenosMaize anthracnose, caused by the ascomycete fungus Colletotrichum graminicola, is an important crop disease worldwide. Understanding the genetic diversity and mechanisms underlying genetic variation in pathogen populations is crucial to the development of effective control strategies. The genus Colletotrichum is largely recognized as asexual, but several species have been reported to have a sexual cycle. We employed a population genomics approach to investigate the genetic diversity and reproductive biology of C. graminicola isolates infecting maize. We sequenced 108 isolates of C. graminicola collected in 14 countries using restriction site-associated DNA sequencing (RAD-Seq) and whole-genome sequencing (WGS). Clustering analyses based on single-nucleotide polymorphisms showed populational differentiation at a global scale, with three genetic groups delimited by continental origin, corresponding to the isolates from South America, Europe, and North America, compatible with short-dispersal of the pathogen, and geographic subdivision. Intra and inter-continental migration was predicted between Europe and South America, likely associated with the movement of contaminated germplasm. Low clonality and evidence of genetic recombination were detected from the analysis of linkage disequilibrium and the pairwise homoplasy index (PHI) test for clonality. Although the sexual state of C. graminicola has only been reported in lab conditions, we showed strong evidence that genetic recomb... Mostrar Tudo |
Palavras-Chave: |
Maize anthracnos. |
Thesagro: |
Colletotrichum Graminicola; Milho. |
Categoria do assunto: |
H Saúde e Patologia |
URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/doc/1150563/1/RA-BettiolW-XX-Congresso-SEF-2022-Valencia.pdf
|
Marc: |
LEADER 02933nam a2200397 a 4500 001 2150563 005 2023-01-03 008 2022 bl uuuu u00u1 u #d 100 1 $aROGERIO, F. 245 $aMigration and genetic recombination shape the global population structure of Colletotrichum graminicola, the causal agent of maize anthracnose.$h[electronic resource] 260 $aIn: CONGRESO DE LA SOCIEDADE ESPAÑOLA DE FITOPATOLOGIA, 20., 2022, València. [Libro de resúmenes...] València: Sociedad Española de Fitopatología, 2022. Póster 172.$c2022 300 $ap. 290. 520 $aMaize anthracnose, caused by the ascomycete fungus Colletotrichum graminicola, is an important crop disease worldwide. Understanding the genetic diversity and mechanisms underlying genetic variation in pathogen populations is crucial to the development of effective control strategies. The genus Colletotrichum is largely recognized as asexual, but several species have been reported to have a sexual cycle. We employed a population genomics approach to investigate the genetic diversity and reproductive biology of C. graminicola isolates infecting maize. We sequenced 108 isolates of C. graminicola collected in 14 countries using restriction site-associated DNA sequencing (RAD-Seq) and whole-genome sequencing (WGS). Clustering analyses based on single-nucleotide polymorphisms showed populational differentiation at a global scale, with three genetic groups delimited by continental origin, corresponding to the isolates from South America, Europe, and North America, compatible with short-dispersal of the pathogen, and geographic subdivision. Intra and inter-continental migration was predicted between Europe and South America, likely associated with the movement of contaminated germplasm. Low clonality and evidence of genetic recombination were detected from the analysis of linkage disequilibrium and the pairwise homoplasy index (PHI) test for clonality. Although the sexual state of C. graminicola has only been reported in lab conditions, we showed strong evidence that genetic recombination have a great impact on C. graminicola population structure, in contrast to the traditional view of C. graminicola being mainly clonal. 650 $aColletotrichum Graminicola 650 $aMilho 653 $aMaize anthracnos 700 1 $aBARONCELLI, R. 700 1 $aCUEVAS-FERNÁNDEZ, F. B.. 700 1 $aBECERRA. S. 700 1 $aCROUCH, J. 700 1 $aBETTIOL, W. 700 1 $aAZCÁRATE-PERIL, M. A. 700 1 $aMALAPI-WIGHT, M. 700 1 $aORTEGA, V. 700 1 $aBETRAN, J. 700 1 $aTENUTA, A. 700 1 $aDAMBOLENA, J. S. 700 1 $aESKER, P. D. 700 1 $aREVILLA, P. 700 1 $aJACKSON-ZIEMS, T. A. 700 1 $aHILTBRUNNER, J. 700 1 $aMUNKVOLD, G. 700 1 $aBUHINICEK, I. 700 1 $aVICENTE-VILLARDÓN, J. L. 700 1 $aSUKNO, S. A. 700 1 $aTHON, M. R.
Download
Esconder MarcMostrar Marc Completo |
Registro original: |
Embrapa Meio Ambiente (CNPMA) |
|
Biblioteca |
ID |
Origem |
Tipo/Formato |
Classificação |
Cutter |
Registro |
Volume |
Status |
Fechar
|
Nenhum registro encontrado para a expressão de busca informada. |
|
|